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The map label for this gene is 33863887

Identifier: 33863887

GI number: 33863887

Start: 1722792

End: 1723295

Strand: Reverse

Name: 33863887

Synonym: PMT1620

Alternate gene names: NA

Gene position: 1723295-1722792 (Counterclockwise)

Preceding gene: 33863888

Following gene: 33863886

Centisome position: 71.48

GC content: 52.18

Gene sequence:

>504_bases
ATGCTCGGCATGCTGAGCTCACAGAAAGCCCCATCGCTTGTAGCCGCAGCCCTTTTGGCAGTGATGGGTTTGTTGGGGAT
GCATCAGGAGCAGGCGCTCATGGTTTCTGGAACTTGGTCGAGTGGTGAAGATGTGACGTCTCGTTTAGCGGAACGGGAGG
CCACTCTCAACCTGCGCAGCGAGGCCGAAGCGTTGTTGTTGTCTTTCACCCGAGCTCAGATGACACGTTTCTATTGGGGT
GAGTTTGCCTCGTCGTTGGATGAGCTGGGCCTGACTGTCGGAGAACCTCTCATCGCACATGTGCAACGATCAAAAAACCT
CACCATGTTGTGGCTGGCTCCTCAACATGGTGAGGAAGCCTATTTATCCATTGTTCGTCGTGACAGCAGCGGGACTAGGC
TCGAGAGACTTCATTGCAGAGGCAATGTTTCCAGATTGAAGCAACCCTTTTTGGGTCGATGCCCAGATGGATGGAGTGCA
TTTTTGCCTTTAAAAAACATTTGA

Upstream 100 bases:

>100_bases
TTCATCACAATCTTTGGAGCATGGCGGTGGTGAGTGATTTCAGTGCGATGTCTAATGCACCAATGCTCTGCTTAGTTTGA
GGGTCATTGTTGAGACGCTC

Downstream 100 bases:

>100_bases
ATATTGCGACATCAACTTGATTAGGCCTCTTGATTATTGGGGCACGATGAGATTCGCGATCTTTCAGCCTTGGTGCAAGA
CCAGTTTGATTACGGCCTGA

Product: thymidylate synthase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 167; Mature: 167

Protein sequence:

>167_residues
MLGMLSSQKAPSLVAAALLAVMGLLGMHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWG
EFASSLDELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEAYLSIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSA
FLPLKNI

Sequences:

>Translated_167_residues
MLGMLSSQKAPSLVAAALLAVMGLLGMHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWG
EFASSLDELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEAYLSIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSA
FLPLKNI
>Mature_167_residues
MLGMLSSQKAPSLVAAALLAVMGLLGMHQEQALMVSGTWSSGEDVTSRLAEREATLNLRSEAEALLLSFTRAQMTRFYWG
EFASSLDELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEAYLSIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSA
FLPLKNI

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18457; Mature: 18457

Theoretical pI: Translated: 8.25; Mature: 8.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLGMLSSQKAPSLVAAALLAVMGLLGMHQEQALMVSGTWSSGEDVTSRLAEREATLNLRS
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHH
EAEALLLSFTRAQMTRFYWGEFASSLDELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCHHH
YLSIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSAFLPLKNI
HHHHHHCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCEECCCCCCC
>Mature Secondary Structure
MLGMLSSQKAPSLVAAALLAVMGLLGMHQEQALMVSGTWSSGEDVTSRLAEREATLNLRS
CCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHCCHHH
EAEALLLSFTRAQMTRFYWGEFASSLDELGLTVGEPLIAHVQRSKNLTMLWLAPQHGEEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCEEEEEECCCCCHHH
YLSIVRRDSSGTRLERLHCRGNVSRLKQPFLGRCPDGWSAFLPLKNI
HHHHHHCCCCCCHHHHHHHCCCHHHHCCCCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA