Click here to switch to the map view.

The map label for this gene is 33863878

Identifier: 33863878

GI number: 33863878

Start: 1711374

End: 1711823

Strand: Reverse

Name: 33863878

Synonym: PMT1611

Alternate gene names: NA

Gene position: 1711823-1711374 (Counterclockwise)

Preceding gene: 33863880

Following gene: 33863876

Centisome position: 71.0

GC content: 52.0

Gene sequence:

>450_bases
GTGCTGAATACTTTGCGCTACATCCACGCCAATCCCAAAGCAGCTGGAGTGCGAAAGGGTTTCTATGATCCCTATTCCAA
CTACGGGCACTACGGCAGGTTGGCGTGTGATGGCATCAGCGAATGGCACCCCAGTTTCCTGCAACTGGCATCAAGCCTGA
AGGGATGCTCCAGGCGATATGAGCGGTTTTGCCAGAAGTATCGCCATCACTCCAAGGGAGGGGCTAAGTGCCATTGGGGC
TCAAGGATGCTGAAGCGATTGCTTCAGAGCGCTAGGAGCAACAGAAGCAAGAAGAAACGGGTCTCACCAGGTCAACAGCA
ACTCCCATTTGCATTTGATGTTCGGCTCAATCAAATTCCAGAGGAGTGGCATCAAGTTGCGGTGAGATTTAGAAGGGCAA
ATGGCATCCGTGATGGTGATAGGGAGCGAAGTATTTGGCAGTTGCGTTGA

Upstream 100 bases:

>100_bases
TGTTGTCTGGATCTTGCAAGATTATTTGTAGATAAATTAATCTTTTGCTCCCAAATCTTCTGCCCATTCGAATGCGATTG
CCACCAAAGACCACAGACGA

Downstream 100 bases:

>100_bases
GGGGATATGAATAGATGTAGGACTAAAGAAAGCTGAGGCTTTGTTTGCTCTGCCTTGTATTTTTTGTGGATGGATTAGGC
GACTAGATGGGTGAAAGCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 149; Mature: 149

Protein sequence:

>149_residues
MLNTLRYIHANPKAAGVRKGFYDPYSNYGHYGRLACDGISEWHPSFLQLASSLKGCSRRYERFCQKYRHHSKGGAKCHWG
SRMLKRLLQSARSNRSKKKRVSPGQQQLPFAFDVRLNQIPEEWHQVAVRFRRANGIRDGDRERSIWQLR

Sequences:

>Translated_149_residues
MLNTLRYIHANPKAAGVRKGFYDPYSNYGHYGRLACDGISEWHPSFLQLASSLKGCSRRYERFCQKYRHHSKGGAKCHWG
SRMLKRLLQSARSNRSKKKRVSPGQQQLPFAFDVRLNQIPEEWHQVAVRFRRANGIRDGDRERSIWQLR
>Mature_149_residues
MLNTLRYIHANPKAAGVRKGFYDPYSNYGHYGRLACDGISEWHPSFLQLASSLKGCSRRYERFCQKYRHHSKGGAKCHWG
SRMLKRLLQSARSNRSKKKRVSPGQQQLPFAFDVRLNQIPEEWHQVAVRFRRANGIRDGDRERSIWQLR

Specific function: Unknown

COG id: COG1943

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17518; Mature: 17518

Theoretical pI: Translated: 11.25; Mature: 11.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLNTLRYIHANPKAAGVRKGFYDPYSNYGHYGRLACDGISEWHPSFLQLASSLKGCSRRY
CCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
ERFCQKYRHHSKGGAKCHWGSRMLKRLLQSARSNRSKKKRVSPGQQQLPFAFDVRLNQIP
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHCCCHHHHHHHHCH
EEWHQVAVRFRRANGIRDGDRERSIWQLR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCC
>Mature Secondary Structure
MLNTLRYIHANPKAAGVRKGFYDPYSNYGHYGRLACDGISEWHPSFLQLASSLKGCSRRY
CCCCCCEEECCCCHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHH
ERFCQKYRHHSKGGAKCHWGSRMLKRLLQSARSNRSKKKRVSPGQQQLPFAFDVRLNQIP
HHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCHHHHHHCCCCCHHCCCHHHHHHHHCH
EEWHQVAVRFRRANGIRDGDRERSIWQLR
HHHHHHHHHHHHHCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA