| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863867
Identifier: 33863867
GI number: 33863867
Start: 1698857
End: 1699570
Strand: Reverse
Name: 33863867
Synonym: PMT1600
Alternate gene names: NA
Gene position: 1699570-1698857 (Counterclockwise)
Preceding gene: 33863868
Following gene: 33863863
Centisome position: 70.5
GC content: 50.98
Gene sequence:
>714_bases ATGGCTCGTTATTTCCCCTCTGCAGTTGCTCTGGTCCTGGTAGGTGCGACGGGCCTGGCTGGATGGTCGTCATCTGTTCA GGCTCAGGGATCTCTCTTTACAGCAGCCCCTGTTGAGCAGAGCCGATTCATTTTGGTGGGTGCCCCGATTGGGAAGGGTG AGAGGTCGCAGTTGAATATCTACGAACAACGCAGTAGCAAACGAGCCTGTTTTGCAGTCGATGGAAGCTTGCCGGCTGTT GTTGATCCTTTGCTTGCGAGATTTGATTTCACCGGGATTTGCAATCGATACATTGACGGCAATGGGTATTCGTTGCGGAT AGGGGGCGATGACCTAGGAACTCACTATCGCTTGAGTGTGGTAAGGACTGATGGGGATATGCATTTGCTAGCCATCCCCA CTAGGGATACCTCTAGCCCAGCCCTGATCGTGGCCAGGGCTGGTGGTGCAGGGGTTTCTAGCAGTGATTTCCTTAAGTTG AACTTCGAGCCTGGTTGGCAATTGATGCGTCGCCAATATGGGCAACGTACGCTTGGCCATCTGTATGTGTTCAGCGAAAC TTGGCCTGGAAGTTCAGATGAAGGCGTCACGGTAGAGGAAGTCGTAGTTGAGGAAGTCGTTGAGGAGGTAGATGTTGAGG AAATAGTTGTTGAGGAGGCAACTGTTGAAGAAATAACCCCTGATACCTCAACTGTTGAATATCTTGATCGATAA
Upstream 100 bases:
>100_bases GATTCACTGTTGGTCATGATTCGACTCAACAAACCGGCCTGAGGGGGCAGCCGATTGCTCTGCAGACTTTTACGATTCGA TCAGAATCTTGCAGGCCTTG
Downstream 100 bases:
>100_bases GTAGATTCAGCTTGTTACTCTGCCTGGCTAAAAATTTGTTGCTTGCTCAATGAACTAGGCCATTGTTGGAGAGAATTGGC GAAGTTAACTTGTCGGCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 237; Mature: 236
Protein sequence:
>237_residues MARYFPSAVALVLVGATGLAGWSSSVQAQGSLFTAAPVEQSRFILVGAPIGKGERSQLNIYEQRSSKRACFAVDGSLPAV VDPLLARFDFTGICNRYIDGNGYSLRIGGDDLGTHYRLSVVRTDGDMHLLAIPTRDTSSPALIVARAGGAGVSSSDFLKL NFEPGWQLMRRQYGQRTLGHLYVFSETWPGSSDEGVTVEEVVVEEVVEEVDVEEIVVEEATVEEITPDTSTVEYLDR
Sequences:
>Translated_237_residues MARYFPSAVALVLVGATGLAGWSSSVQAQGSLFTAAPVEQSRFILVGAPIGKGERSQLNIYEQRSSKRACFAVDGSLPAV VDPLLARFDFTGICNRYIDGNGYSLRIGGDDLGTHYRLSVVRTDGDMHLLAIPTRDTSSPALIVARAGGAGVSSSDFLKL NFEPGWQLMRRQYGQRTLGHLYVFSETWPGSSDEGVTVEEVVVEEVVEEVDVEEIVVEEATVEEITPDTSTVEYLDR >Mature_236_residues ARYFPSAVALVLVGATGLAGWSSSVQAQGSLFTAAPVEQSRFILVGAPIGKGERSQLNIYEQRSSKRACFAVDGSLPAVV DPLLARFDFTGICNRYIDGNGYSLRIGGDDLGTHYRLSVVRTDGDMHLLAIPTRDTSSPALIVARAGGAGVSSSDFLKLN FEPGWQLMRRQYGQRTLGHLYVFSETWPGSSDEGVTVEEVVVEEVVEEVDVEEIVVEEATVEEITPDTSTVEYLDR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25710; Mature: 25579
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARYFPSAVALVLVGATGLAGWSSSVQAQGSLFTAAPVEQSRFILVGAPIGKGERSQLNI CCCCCHHHHEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCEEEE YEQRSSKRACFAVDGSLPAVVDPLLARFDFTGICNRYIDGNGYSLRIGGDDLGTHYRLSV EECCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHEECCCCEEEEECCCCCCCEEEEEE VRTDGDMHLLAIPTRDTSSPALIVARAGGAGVSSSDFLKLNFEPGWQLMRRQYGQRTLGH EEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEE LYVFSETWPGSSDEGVTVEEVVVEEVVEEVDVEEIVVEEATVEEITPDTSTVEYLDR EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCCCHHHHHCC >Mature Secondary Structure ARYFPSAVALVLVGATGLAGWSSSVQAQGSLFTAAPVEQSRFILVGAPIGKGERSQLNI CCCCHHHHEEEEECCCCCCCCCCCCCCCCCEEEECCCCCCCEEEEECCCCCCCCCEEEE YEQRSSKRACFAVDGSLPAVVDPLLARFDFTGICNRYIDGNGYSLRIGGDDLGTHYRLSV EECCCCCCEEEEECCCCHHHHHHHHHHCCHHHHHHHEECCCCEEEEECCCCCCCEEEEEE VRTDGDMHLLAIPTRDTSSPALIVARAGGAGVSSSDFLKLNFEPGWQLMRRQYGQRTLGH EEECCCEEEEEEECCCCCCCEEEEEECCCCCCCCCCEEEEECCCCHHHHHHHHCCCCEEE LYVFSETWPGSSDEGVTVEEVVVEEVVEEVDVEEIVVEEATVEEITPDTSTVEYLDR EEEEECCCCCCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCHHHHCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA