| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863856
Identifier: 33863856
GI number: 33863856
Start: 1691393
End: 1691713
Strand: Reverse
Name: 33863856
Synonym: PMT1589
Alternate gene names: NA
Gene position: 1691713-1691393 (Counterclockwise)
Preceding gene: 33863861
Following gene: 33863854
Centisome position: 70.17
GC content: 54.52
Gene sequence:
>321_bases GTGACACCAGTTCTGATTCAAGCGCTGCCAACGCTGCATCTGGTTCTGGCCTTTGCGCTTGCGTTTTGGACGCTGACATT TATCTTTCGGATCGTGCTCTCTTGGTATCCCCAGGTAAAGCTCAGCGAGGGGTTTTGGCCTTTGGTGAGTTGGCCCACGG AGCCTCTTTTGGCGATGACCCGCCGTGTGGTGGCTCCCATTGGTGGAGTGGATGTCACTCCCGTGATATGGGCTGGATTG ATCAGTTTGTTGAGGGAGTTGTTGGTTGGCCAGCAAGGACTGCTCTCTCAGATGCTGCTTAAGAGCCAGGCCATTGCTTG A
Upstream 100 bases:
>100_bases AGAAGCGGTCATAGCAGTGGTTCTGACTTGGGCGAGGCCATCATGATCTTAATGATCAGGGGTGACTTTCTACGATGGAA TTGCTGATGCTTTGAGCTTT
Downstream 100 bases:
>100_bases GATTGAACGAAGGAATTTCAGTCGAGCATGTCCTGTTCGACAAATTTGGTGTGAACATCTCCTCTCAGAAATTCTTCCCG ATTGAGCAGTTCGAGATGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 106; Mature: 105
Protein sequence:
>106_residues MTPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWPLVSWPTEPLLAMTRRVVAPIGGVDVTPVIWAGL ISLLRELLVGQQGLLSQMLLKSQAIA
Sequences:
>Translated_106_residues MTPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWPLVSWPTEPLLAMTRRVVAPIGGVDVTPVIWAGL ISLLRELLVGQQGLLSQMLLKSQAIA >Mature_105_residues TPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWPLVSWPTEPLLAMTRRVVAPIGGVDVTPVIWAGLI SLLRELLVGQQGLLSQMLLKSQAIA
Specific function: Unknown
COG id: COG0762
COG function: function code S; Predicted integral membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11779; Mature: 11648
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWPLVSWPTEPLLAMT CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH RRVVAPIGGVDVTPVIWAGLISLLRELLVGQQGLLSQMLLKSQAIA HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC >Mature Secondary Structure TPVLIQALPTLHLVLAFALAFWTLTFIFRIVLSWYPQVKLSEGFWPLVSWPTEPLLAMT CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHH RRVVAPIGGVDVTPVIWAGLISLLRELLVGQQGLLSQMLLKSQAIA HHHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA