| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is icc [C]
Identifier: 33863822
GI number: 33863822
Start: 1648479
End: 1649270
Strand: Reverse
Name: icc [C]
Synonym: PMT1555
Alternate gene names: 33863822
Gene position: 1649270-1648479 (Counterclockwise)
Preceding gene: 33863823
Following gene: 33863818
Centisome position: 68.41
GC content: 48.74
Gene sequence:
>792_bases ATGCGCTTAGTACAGCTTAGTGATCCTCATCTTGTTGCCTTTAATCAACGATTGGTGCGAGGTCAAAATCCTCTGTTGAA TTTTCAGTGTGCATTGCAACATGGAGCCTCTCATTCCCCGGATCTGCTTTTGATTACTGGTGATCTTTGCCATGACGAAA CCTGGTGTGGGTATATTTTGTTGCGTCATGAATTGCAGAATCTTTCTCCATCAATCAAGGTTGCTGTTCTTCCTGGCAAC CATGACAACCCTTTGTTCATCAAGGCGGCTCTTGGACGCCATGCCTTTACAGCCCCAGCAGATTTGAATGTGGATGGTGT TCGTCTCATTCTTCTTAGTAGTCATGTCCCAGGTCGAACAGCAGGTCAACTTGGTGAATCACAACTGCAATGGCTCGATG CGCGCTTATCAGATTTTCAGCAATCTGGCAGGCCATTAGTGGTGGCGGTGCATCATCCACCTTTGCCGATTGGCTCTTCC TGGTTGGATGCCATTGGTCTAGTGGATGGTGAGGCGTTGATCAAGCTACTCACTCCTGTAGACGAGTTATGCGCTGTGGT ATGTGGCCATATCCATCAGCACTGGCAAGGGGGATTGCCTGGGCGTAAAGATGTGTTGGTGCTTGGCTGCCCTTCCACTC TTTGCAGTTTTAAGGCTGTACAACCATGCCTTCTGGGTCGAGAAGATGAACCTGGTGGGCGTTTGATTGAGTTGGATGAA AGGGGCAACTTTTTTGAAAAGCTCCTGCGATGGTCATATCCCGATCTTGACCAGGCTGATGCGGGTCGATAA
Upstream 100 bases:
>100_bases ATTTACGAGTAGGCAGAAACCAGCTTCTGGTTTTTCTCATGCTTGAACAAGGGAGATAGCCTCCATGACAAAACCGCTGC GAAGATCCGCTGCACAATAA
Downstream 100 bases:
>100_bases CCAAGGCAGAATCGATGCCCTTATGTTGTGAGTCCTAATATATCTTTCTAAGACATAAACTAATTCTTGACTCACAATAC AGTTATTACTACAGAGATTA
Product: Serine/threonine specific protein phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 263; Mature: 263
Protein sequence:
>263_residues MRLVQLSDPHLVAFNQRLVRGQNPLLNFQCALQHGASHSPDLLLITGDLCHDETWCGYILLRHELQNLSPSIKVAVLPGN HDNPLFIKAALGRHAFTAPADLNVDGVRLILLSSHVPGRTAGQLGESQLQWLDARLSDFQQSGRPLVVAVHHPPLPIGSS WLDAIGLVDGEALIKLLTPVDELCAVVCGHIHQHWQGGLPGRKDVLVLGCPSTLCSFKAVQPCLLGREDEPGGRLIELDE RGNFFEKLLRWSYPDLDQADAGR
Sequences:
>Translated_263_residues MRLVQLSDPHLVAFNQRLVRGQNPLLNFQCALQHGASHSPDLLLITGDLCHDETWCGYILLRHELQNLSPSIKVAVLPGN HDNPLFIKAALGRHAFTAPADLNVDGVRLILLSSHVPGRTAGQLGESQLQWLDARLSDFQQSGRPLVVAVHHPPLPIGSS WLDAIGLVDGEALIKLLTPVDELCAVVCGHIHQHWQGGLPGRKDVLVLGCPSTLCSFKAVQPCLLGREDEPGGRLIELDE RGNFFEKLLRWSYPDLDQADAGR >Mature_263_residues MRLVQLSDPHLVAFNQRLVRGQNPLLNFQCALQHGASHSPDLLLITGDLCHDETWCGYILLRHELQNLSPSIKVAVLPGN HDNPLFIKAALGRHAFTAPADLNVDGVRLILLSSHVPGRTAGQLGESQLQWLDARLSDFQQSGRPLVVAVHHPPLPIGSS WLDAIGLVDGEALIKLLTPVDELCAVVCGHIHQHWQGGLPGRKDVLVLGCPSTLCSFKAVQPCLLGREDEPGGRLIELDE RGNFFEKLLRWSYPDLDQADAGR
Specific function: Affects The Expression Of The Lacz Gene. [C]
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1789410, Length=255, Percent_Identity=32.156862745098, Blast_Score=87, Evalue=8e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004843 [H]
Pfam domain/function: PF00149 Metallophos [H]
EC number: NA
Molecular weight: Translated: 28819; Mature: 28819
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.0 %Cys (Translated Protein) 0.4 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 3.0 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLVQLSDPHLVAFNQRLVRGQNPLLNFQCALQHGASHSPDLLLITGDLCHDETWCGYIL CEEEEECCCCEEEECHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHH LRHELQNLSPSIKVAVLPGNHDNPLFIKAALGRHAFTAPADLNVDGVRLILLSSHVPGRT HHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCEECCCCCCCCCCEEEEEEECCCCCCC AGQLGESQLQWLDARLSDFQQSGRPLVVAVHHPPLPIGSSWLDAIGLVDGEALIKLLTPV HHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCH DELCAVVCGHIHQHWQGGLPGRKDVLVLGCPSTLCSFKAVQPCLLGREDEPGGRLIELDE HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEECC RGNFFEKLLRWSYPDLDQADAGR CCCHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MRLVQLSDPHLVAFNQRLVRGQNPLLNFQCALQHGASHSPDLLLITGDLCHDETWCGYIL CEEEEECCCCEEEECHHHHCCCCCEEEEEEEECCCCCCCCCEEEEECCCCCCCCHHHHHH LRHELQNLSPSIKVAVLPGNHDNPLFIKAALGRHAFTAPADLNVDGVRLILLSSHVPGRT HHHHHHCCCCCEEEEEECCCCCCCEEEEEECCCCEECCCCCCCCCCEEEEEEECCCCCCC AGQLGESQLQWLDARLSDFQQSGRPLVVAVHHPPLPIGSSWLDAIGLVDGEALIKLLTPV HHHCCHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCHHHHHHHHCCCHHHHHHHHCCH DELCAVVCGHIHQHWQGGLPGRKDVLVLGCPSTLCSFKAVQPCLLGREDEPGGRLIELDE HHHHHHHHHHHHHHHCCCCCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCCCCCEEEECC RGNFFEKLLRWSYPDLDQADAGR CCCHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA