| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is yqjG [H]
Identifier: 33863805
GI number: 33863805
Start: 1629557
End: 1630570
Strand: Direct
Name: yqjG [H]
Synonym: PMT1538
Alternate gene names: 33863805
Gene position: 1629557-1630570 (Clockwise)
Preceding gene: 33863803
Following gene: 33863806
Centisome position: 67.59
GC content: 57.4
Gene sequence:
>1014_bases ATGGCTGCAAAGGGAACAACCATGTCGATCCCCCCCGCAATCGTTGCCGCAGCACGCATGGGCTGGCACTGGCAATGGAT TCAATTAATGAACGGTCTTGCTCCAGCAGATGCCAAGGGGAACTATCAGCGCCCCCCCAGCCAGCATCAGCAAGCAAGAT TGCCCGCAGAGCAAGAGCTGAGCAACAGATCAGCAGACCAATACCCACGCCTGATCATTGGGCGCAGCTGTCCTTGGGCA CATCGCACCTGGCTGGTGCTTCAACTGCGCAACCTTCAGAGCAGCCTCACCCTGCACCTGGCACGCGCCGACCACAAGGC CGGCCGTTGGCAATTAGATCCAGCCTGGTTGGGCTGCAATTCTCTACTTGCCCTTTACCAACGCTGTGGCTCCCCACCCA GCCATCGCGCCACTGTTCCGGCCCTGGTCGATCCAGGCACCATGACATCCCAATCACCGCAGCTACTCGGTAACGAAAGT GCCCAACTCGTGGAAGTTTTGAACCTTTGGCCGGCGGCTAAAGATGCTCCCGACCTAGCCCCCTCCAATCTTCAAGGTGA GATCAATGGCTGGCAAAAGCTTCTTCAGCCCGCTGTCAACGATGGTGTCTATCGATGTGGTTTTGCACGCAACCAAGCGG CTTACGACAAGGCCTGTAACGAGCTATTCGACACCCTTGCGCAAGTGGACCGCAGCCTCTCCAATAAGGGTCCATGGCTT TGTGGAGACCAACTCACCCTGGCTGACGTGAGGCTGTTCCCGACCTTGATCCGCTGGGAGATGGTCTATGCACCACTGTT TGGCTGCAGTCAACAGCCCCTTTGGGCCTTCCCTCATCTCTGGCATTGGCGCCAAAGGCTTCTGGCCCTCCCAGGTGTAG CCAAAACCTGTGATTCGCAGGCCTGGCGTCAGGACTATTTCGGCGCACTCTTTCCTCTACATCCGAGCAATATTGTTCCG GCCGGTCCTGATCTGGCCAAACTGGTAAATGCATCAGCCCCTGATCAGCGATGA
Upstream 100 bases:
>100_bases AAGCCAGGGACCGTTGATTTCATTGCCATGAGTACCCGCCACCAGAAGCACCTGAAGGCCAGACATCAAGATTCGATCGC AATCCTCAGCCTGACCGAAA
Downstream 100 bases:
>100_bases CCAACAACACACAATCCTTGAATTCAGACATCGCCGCTATGGCAGAGAAGGAGTTTGAGGGTGTTTATGGCCGCTACAGG ATCACCAGCACTGACGAATT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 337; Mature: 336
Protein sequence:
>337_residues MAAKGTTMSIPPAIVAAARMGWHWQWIQLMNGLAPADAKGNYQRPPSQHQQARLPAEQELSNRSADQYPRLIIGRSCPWA HRTWLVLQLRNLQSSLTLHLARADHKAGRWQLDPAWLGCNSLLALYQRCGSPPSHRATVPALVDPGTMTSQSPQLLGNES AQLVEVLNLWPAAKDAPDLAPSNLQGEINGWQKLLQPAVNDGVYRCGFARNQAAYDKACNELFDTLAQVDRSLSNKGPWL CGDQLTLADVRLFPTLIRWEMVYAPLFGCSQQPLWAFPHLWHWRQRLLALPGVAKTCDSQAWRQDYFGALFPLHPSNIVP AGPDLAKLVNASAPDQR
Sequences:
>Translated_337_residues MAAKGTTMSIPPAIVAAARMGWHWQWIQLMNGLAPADAKGNYQRPPSQHQQARLPAEQELSNRSADQYPRLIIGRSCPWA HRTWLVLQLRNLQSSLTLHLARADHKAGRWQLDPAWLGCNSLLALYQRCGSPPSHRATVPALVDPGTMTSQSPQLLGNES AQLVEVLNLWPAAKDAPDLAPSNLQGEINGWQKLLQPAVNDGVYRCGFARNQAAYDKACNELFDTLAQVDRSLSNKGPWL CGDQLTLADVRLFPTLIRWEMVYAPLFGCSQQPLWAFPHLWHWRQRLLALPGVAKTCDSQAWRQDYFGALFPLHPSNIVP AGPDLAKLVNASAPDQR >Mature_336_residues AAKGTTMSIPPAIVAAARMGWHWQWIQLMNGLAPADAKGNYQRPPSQHQQARLPAEQELSNRSADQYPRLIIGRSCPWAH RTWLVLQLRNLQSSLTLHLARADHKAGRWQLDPAWLGCNSLLALYQRCGSPPSHRATVPALVDPGTMTSQSPQLLGNESA QLVEVLNLWPAAKDAPDLAPSNLQGEINGWQKLLQPAVNDGVYRCGFARNQAAYDKACNELFDTLAQVDRSLSNKGPWLC GDQLTLADVRLFPTLIRWEMVYAPLFGCSQQPLWAFPHLWHWRQRLLALPGVAKTCDSQAWRQDYFGALFPLHPSNIVPA GPDLAKLVNASAPDQR
Specific function: Unknown
COG id: COG0435
COG function: function code O; Predicted glutathione S-transferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 GST C-terminal domain [H]
Homologues:
Organism=Escherichia coli, GI1789489, Length=271, Percent_Identity=31.7343173431734, Blast_Score=139, Evalue=3e-34, Organism=Saccharomyces cerevisiae, GI6322929, Length=330, Percent_Identity=25.1515151515152, Blast_Score=101, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6321593, Length=176, Percent_Identity=29.5454545454545, Blast_Score=84, Evalue=4e-17, Organism=Saccharomyces cerevisiae, GI6323906, Length=244, Percent_Identity=26.6393442622951, Blast_Score=80, Evalue=5e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010987 - InterPro: IPR017933 - InterPro: IPR004046 - InterPro: IPR016639 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00043 GST_C [H]
EC number: NA
Molecular weight: Translated: 37477; Mature: 37346
Theoretical pI: Translated: 8.74; Mature: 8.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKGTTMSIPPAIVAAARMGWHWQWIQLMNGLAPADAKGNYQRPPSQHQQARLPAEQEL CCCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHH SNRSADQYPRLIIGRSCPWAHRTWLVLQLRNLQSSLTLHLARADHKAGRWQLDPAWLGCN HCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCEECCHHHHCHH SLLALYQRCGSPPSHRATVPALVDPGTMTSQSPQLLGNESAQLVEVLNLWPAAKDAPDLA HHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCC PSNLQGEINGWQKLLQPAVNDGVYRCGFARNQAAYDKACNELFDTLAQVDRSLSNKGPWL CCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE CGDQLTLADVRLFPTLIRWEMVYAPLFGCSQQPLWAFPHLWHWRQRLLALPGVAKTCDSQ ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH AWRQDYFGALFPLHPSNIVPAGPDLAKLVNASAPDQR HHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure AAKGTTMSIPPAIVAAARMGWHWQWIQLMNGLAPADAKGNYQRPPSQHQQARLPAEQEL CCCCCCCCCCHHHHHHHHHCCCHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCHHHHH SNRSADQYPRLIIGRSCPWAHRTWLVLQLRNLQSSLTLHLARADHKAGRWQLDPAWLGCN HCCCHHHCCCEEEECCCCCHHHHHHHHHHHHHHHHHHEEEHHCCCCCCCEECCHHHHCHH SLLALYQRCGSPPSHRATVPALVDPGTMTSQSPQLLGNESAQLVEVLNLWPAAKDAPDLA HHHHHHHHHCCCCCCCCCCCEEECCCCCCCCCCHHHCCCHHHHHHHHHHCCCCCCCCCCC PSNLQGEINGWQKLLQPAVNDGVYRCGFARNQAAYDKACNELFDTLAQVDRSLSNKGPWL CCCCCCCHHHHHHHHHHHHCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCEE CGDQLTLADVRLFPTLIRWEMVYAPLFGCSQQPLWAFPHLWHWRQRLLALPGVAKTCDSQ ECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHH AWRQDYFGALFPLHPSNIVPAGPDLAKLVNASAPDQR HHHHHHCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9278503 [H]