| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863804
Identifier: 33863804
GI number: 33863804
Start: 1628608
End: 1629522
Strand: Reverse
Name: 33863804
Synonym: PMT1537
Alternate gene names: NA
Gene position: 1629522-1628608 (Counterclockwise)
Preceding gene: 33863810
Following gene: 33863800
Centisome position: 67.59
GC content: 54.75
Gene sequence:
>915_bases ATGTCTGGCCTTCAGGTGCTTCTGGTGGCGGGTACTCATGGCAATGAAATCAACGGTCCCTGGCTTCTCGATCAATGGTC TCAGACCCCTGAGCTGATCAACACCCATGGTGTTGGTGTGGTGCCGGTGATCGGTAATCCAGAGGCTCTTGCGTTGGGCC GGCGTTATTTGGATTGCGATCTCAACCGCAGCTTTCGGCTCGACTTGCTCAGATCTCCCAGCATCTTGGATCGAGAGGTT GTTCGTGCCAAGCAGTTGCTTAGTTTTTTTGGTCCAGAGGGATCAACCCCTTGCCAGATCGTTATTGATTTGCACAGCAC CACTTCAGCAATGGGAAGCACTCTTGTGGTTTATGGCCGACGGTCGGTTGACTTGGCTTTAGCAGCATTGATTCAGGCTC GCTTGGGTTTGCCTATCTATCTGCATGATGGGGATGATGACCAGCAGGGGTTTTTGGTGGAGCGCTGGCCCTGTGGCTTA GTGATTGAAATCGGTCCTGTTCCCCAGGGCCTGTTAAAGGCCCGCATTATTGAACAGACACGACTTGCTGTTCAGGCCTG TCTCGAGGCTCTGAGCAGCGTTGCATCTGGATCGCCGACCTACCCAGATGAGTTTGTGGTGCACTCTCATCTGGGTAGTC TGGACCTGCCCCGTGATGCCTTGGGCCAGCCTGCTGCATGTGTGCATCCATCTCTTCAGGGCCGTGATTGGCAGCCTCTG CAGATGGGCGCCCCCTTGTTTCTCTGGCCAGATGGAGAGGTGTTCAGATTTGAAGGTCGAGATTCTCCCATCCCCGTTTT TATCAACGAGGCGGCCTACGTTGAAAAGCACATCGCCATGAGCCTGACCTGTCGAGAGGTCTGCCCCCTGCCTGAGCAAT GGCAAGGGGCCCTGCAGCAGTTAGTCGACTGTTAA
Upstream 100 bases:
>100_bases CCAGCCCATGCGTGCTGCGGCAACGATTGCGGGGGGGATCGACATGGTTGTTCCCTTTGCAGCCATTTTCGGTCAGGCTG AGGATTGCGATCGAATCTTG
Downstream 100 bases:
>100_bases CGAGGGGGACCGTTGTAGATGATCTGATTGACAGACCTTCCGTCGGGGGCAATCTGAATGACGGTTTCTGTGGTCGGTTC ATTGCCATATTCCGACCAGC
Product: aspartoacylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 304; Mature: 303
Protein sequence:
>304_residues MSGLQVLLVAGTHGNEINGPWLLDQWSQTPELINTHGVGVVPVIGNPEALALGRRYLDCDLNRSFRLDLLRSPSILDREV VRAKQLLSFFGPEGSTPCQIVIDLHSTTSAMGSTLVVYGRRSVDLALAALIQARLGLPIYLHDGDDDQQGFLVERWPCGL VIEIGPVPQGLLKARIIEQTRLAVQACLEALSSVASGSPTYPDEFVVHSHLGSLDLPRDALGQPAACVHPSLQGRDWQPL QMGAPLFLWPDGEVFRFEGRDSPIPVFINEAAYVEKHIAMSLTCREVCPLPEQWQGALQQLVDC
Sequences:
>Translated_304_residues MSGLQVLLVAGTHGNEINGPWLLDQWSQTPELINTHGVGVVPVIGNPEALALGRRYLDCDLNRSFRLDLLRSPSILDREV VRAKQLLSFFGPEGSTPCQIVIDLHSTTSAMGSTLVVYGRRSVDLALAALIQARLGLPIYLHDGDDDQQGFLVERWPCGL VIEIGPVPQGLLKARIIEQTRLAVQACLEALSSVASGSPTYPDEFVVHSHLGSLDLPRDALGQPAACVHPSLQGRDWQPL QMGAPLFLWPDGEVFRFEGRDSPIPVFINEAAYVEKHIAMSLTCREVCPLPEQWQGALQQLVDC >Mature_303_residues SGLQVLLVAGTHGNEINGPWLLDQWSQTPELINTHGVGVVPVIGNPEALALGRRYLDCDLNRSFRLDLLRSPSILDREVV RAKQLLSFFGPEGSTPCQIVIDLHSTTSAMGSTLVVYGRRSVDLALAALIQARLGLPIYLHDGDDDQQGFLVERWPCGLV IEIGPVPQGLLKARIIEQTRLAVQACLEALSSVASGSPTYPDEFVVHSHLGSLDLPRDALGQPAACVHPSLQGRDWQPLQ MGAPLFLWPDGEVFRFEGRDSPIPVFINEAAYVEKHIAMSLTCREVCPLPEQWQGALQQLVDC
Specific function: Unknown
COG id: COG2988
COG function: function code E; Succinylglutamate desuccinylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AspA/AstE family. Aspartoacylase subfamily
Homologues:
Organism=Homo sapiens, GI4557335, Length=290, Percent_Identity=37.2413793103448, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI189339202, Length=290, Percent_Identity=37.2413793103448, Blast_Score=182, Evalue=3e-46, Organism=Homo sapiens, GI18087825, Length=295, Percent_Identity=36.271186440678, Blast_Score=174, Evalue=7e-44,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ASPA_PROMM (Q7V5L6)
Other databases:
- EMBL: BX548175 - RefSeq: NP_895364.1 - ProteinModelPortal: Q7V5L6 - SMR: Q7V5L6 - STRING: Q7V5L6 - GeneID: 1728413 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT1537 - NMPDR: fig|74547.1.peg.1531 - eggNOG: COG2988 - HOGENOM: HBG635125 - OMA: DFLIQMF - ProtClustDB: PRK02259 - BioCyc: PMAR74547:PMT1537-MONOMER - HAMAP: MF_00704 - InterPro: IPR016708 - InterPro: IPR007036 - PIRSF: PIRSF018001
Pfam domain/function: PF04952 AstE_AspA
EC number: =3.5.1.15
Molecular weight: Translated: 33251; Mature: 33119
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: BINDING 55-55 BINDING 163-163 BINDING 273-273
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGLQVLLVAGTHGNEINGPWLLDQWSQTPELINTHGVGVVPVIGNPEALALGRRYLDCD CCCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHCCCCEEEEEECCCCHHHHCCEEEECC LNRSFRLDLLRSPSILDREVVRAKQLLSFFGPEGSTPCQIVIDLHSTTSAMGSTLVVYGR CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHCCCEEEEECC RSVDLALAALIQARLGLPIYLHDGDDDQQGFLVERWPCGLVIEIGPVPQGLLKARIIEQT CCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHH RLAVQACLEALSSVASGSPTYPDEFVVHSHLGSLDLPRDALGQPAACVHPSLQGRDWQPL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHCCCCEEECCCCCCCCCCCH QMGAPLFLWPDGEVFRFEGRDSPIPVFINEAAYVEKHIAMSLTCREVCPLPEQWQGALQQ HCCCCEEECCCCCEEEECCCCCCCCEEECCHHHHHHHHHHEEEHHHHCCCCHHHHHHHHH LVDC HHCC >Mature Secondary Structure SGLQVLLVAGTHGNEINGPWLLDQWSQTPELINTHGVGVVPVIGNPEALALGRRYLDCD CCEEEEEEECCCCCCCCCCEEECCCCCCCHHHHCCCCEEEEEECCCCHHHHCCEEEECC LNRSFRLDLLRSPSILDREVVRAKQLLSFFGPEGSTPCQIVIDLHSTTSAMGSTLVVYGR CCCCEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCCHHHCCCEEEEECC RSVDLALAALIQARLGLPIYLHDGDDDQQGFLVERWPCGLVIEIGPVPQGLLKARIIEQT CCHHHHHHHHHHHHCCCEEEEECCCCCCCCEEEEECCCCEEEEECCCCHHHHHHHHHHHH RLAVQACLEALSSVASGSPTYPDEFVVHSHLGSLDLPRDALGQPAACVHPSLQGRDWQPL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCHHHHCCCCEEECCCCCCCCCCCH QMGAPLFLWPDGEVFRFEGRDSPIPVFINEAAYVEKHIAMSLTCREVCPLPEQWQGALQQ HCCCCEEECCCCCEEEECCCCCCCCEEECCHHHHHHHHHHEEEHHHHCCCCHHHHHHHHH LVDC HHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642