| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863803
Identifier: 33863803
GI number: 33863803
Start: 1628237
End: 1628611
Strand: Direct
Name: 33863803
Synonym: PMT1536
Alternate gene names: NA
Gene position: 1628237-1628611 (Clockwise)
Preceding gene: 33863802
Following gene: 33863805
Centisome position: 67.54
GC content: 55.2
Gene sequence:
>375_bases ATGTCTCTTCGCACAATCTCACTCGTCATAGCCCTTAGTGGAACTGCCTGCTTGGCCGATCTAGCGACACCGACCCACGC CCAAGACCAGCTTCCTTCCTCCCAGATCCGCGCCCTCAACCTGGCCCGTGGCACCGCGGTCAAAGAAAACGGCGGTCTTT CGGTTTACCAACCGGCGCCTTGCATGTTTGACACCAGCAATGGTGGTAACGATTGCCTGATCAGAAACACCATCAATGGC TACACCTATAGCTTCTTAGGTGGGGCCCCAGGCTGGTCGGAATATGGCAATGAACCGACCACAGAAACCGTCATTCAGAT TGCCCCCGACGGAAGGTCTGTCAATCAGATCATCTACAACGGTCCCCCTCGTTAA
Upstream 100 bases:
>100_bases CCCATTGCGTCACCCTCGCCAACCATAAAAACCTTCGGTTTTTGAGCAGACCAAGCGACGCGTTCTTGCTATTAGATGGG TTGAGCCTTCGAGCAAAGCG
Downstream 100 bases:
>100_bases CAGTCGACTAACTGCTGCAGGGCCCCTTGCCATTGCTCAGGCAGGGGGCAGACCTCTCGACAGGTCAGGCTCATGGCGAT GTGCTTTTCAACGTAGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MSLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAPCMFDTSNGGNDCLIRNTING YTYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYNGPPR
Sequences:
>Translated_124_residues MSLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAPCMFDTSNGGNDCLIRNTING YTYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYNGPPR >Mature_123_residues SLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAPCMFDTSNGGNDCLIRNTINGY TYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYNGPPR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13116; Mature: 12985
Theoretical pI: Translated: 4.91; Mature: 4.91
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAP CCCEEEEEEEEECCCCEEHHCCCCCCCCCCCCCCHHEEEECCCCCEEECCCCEEEECCCC CMFDTSNGGNDCLIRNTINGYTYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYN CEEECCCCCCEEEEEECCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEC GPPR CCCC >Mature Secondary Structure SLRTISLVIALSGTACLADLATPTHAQDQLPSSQIRALNLARGTAVKENGGLSVYQPAP CCEEEEEEEEECCCCEEHHCCCCCCCCCCCCCCHHEEEECCCCCEEECCCCEEEECCCC CMFDTSNGGNDCLIRNTINGYTYSFLGGAPGWSEYGNEPTTETVIQIAPDGRSVNQIIYN CEEECCCCCCEEEEEECCCCEEEEEECCCCCHHHHCCCCCCCEEEEECCCCCCCCEEEEC GPPR CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA