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The map label for this gene is psbA [H]

Identifier: 33863799

GI number: 33863799

Start: 1625915

End: 1626991

Strand: Reverse

Name: psbA [H]

Synonym: PMT1532

Alternate gene names: 33863799

Gene position: 1626991-1625915 (Counterclockwise)

Preceding gene: 33863800

Following gene: 33863796

Centisome position: 67.49

GC content: 53.48

Gene sequence:

>1077_bases
ATGACCACCACCATTCGCAGTGGTCGCCTCAGTGGCTGGGAGTCCTTCTGCAATTGGGTCACCTCTACCAATAACCGCAT
TTATGTGGGTTGGTTCGGTGTCCTGATGGTTCCCACGCTGTTGGCAGCTGCCATCTGCTTCACTATTGCCTTTATTGCGG
CACCGCCGGTTGATATCGACGGTATCCGTGAGCCTGTTGCTGGCTCTTTCCTCTACGGCAATAACATCATTTCTGGTGCT
GTTGTTCCTTCCAGCAACGCCATCGGCCTGCACTTTTATCCCATTTGGGAAGCTGCTTCTGTTGATGAGTGGCTTTACAA
CGGCGGTCCTTACCAGCTTGTTGTGTTCCACTTCCTGATCGGCATTTGTTGCTGGTTGGGTCGCCAATGGGAACTCTCCT
ACCGCTTGGGCATGCGCCCTTGGATCTGTGTGGCCTACAGCGCACCGCTGTCGGCAGCCTTTGCTGTTTTCCTGATCTAT
CCCGTTGGTCAGGGTTCCTTCTCGGATGGCATGCCTTTAGGCATCTCTGGAACCTTCAACTTCATGTTGGTGTTCCAGGC
AGAGCACAACATCCTCATGCATCCCTTCCACATGATTGGTGTGGCAGGAATGTTTGGCGGCAGTTTGTTCTCCGCCATGC
ACGGTTCACTGGTGACCTCATCGTTGATTCGTGAAACCACCGAAACCGAGTCTCAGAACTACGGCTATAAGTTCGGCCAA
GAGGAAGAGACCTACAACATCGTGGCTGCCCACGGTTATTTCGGTCGTCTGATCTTCCAGTACGCCAGCTTCAATAACAG
CCGCAGTCTGCACTTCTTCCTGGCTGCCTGGCCGGTGATCTGCATCTGGATCACCTCACTGGGTATTAGCACTATGGCCT
TCAACTTGAACGGCTTTAACTTCAACCAGTCGGTTCTCGATGCCCAAGGCAGAGTTGTACCAACCTGGGCTGATGTGCTC
AACCGCAGCAACCTCGGTATGGAAGTGATGCACGAGCGTAATGCTCATAACTTCCCTCTCGACCTGGCAGCTGCTGAGTC
CACACCTGTGGCTCTGATTGCTCCTGCGATTGGCTGA

Upstream 100 bases:

>100_bases
TCCATTTACAGATTGCGCAATGTTCCTTTACAATTAGCTCTGGCAGGTTTTCCTGCGTTTTTAGCTGTCCCTTCGGGGGC
TCTTTTTCTTACTTAACTCA

Downstream 100 bases:

>100_bases
TCTGATCATCACCAATACAAGGTTTGGCAGCAGCTGAACCTCAAAACCCCCTCTCAAGAGGGGGTTTTTTTATGATTGTT
CTGGTGTATTAGCTCAGATC

Product: photosystem II PsbA protein (D1)

Products: NA

Alternate protein names: 32 kDa thylakoid membrane protein; Photosystem II protein D1 [H]

Number of amino acids: Translated: 358; Mature: 357

Protein sequence:

>358_residues
MTTTIRSGRLSGWESFCNWVTSTNNRIYVGWFGVLMVPTLLAAAICFTIAFIAAPPVDIDGIREPVAGSFLYGNNIISGA
VVPSSNAIGLHFYPIWEAASVDEWLYNGGPYQLVVFHFLIGICCWLGRQWELSYRLGMRPWICVAYSAPLSAAFAVFLIY
PVGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMIGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKFGQ
EEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVICIWITSLGISTMAFNLNGFNFNQSVLDAQGRVVPTWADVL
NRSNLGMEVMHERNAHNFPLDLAAAESTPVALIAPAIG

Sequences:

>Translated_358_residues
MTTTIRSGRLSGWESFCNWVTSTNNRIYVGWFGVLMVPTLLAAAICFTIAFIAAPPVDIDGIREPVAGSFLYGNNIISGA
VVPSSNAIGLHFYPIWEAASVDEWLYNGGPYQLVVFHFLIGICCWLGRQWELSYRLGMRPWICVAYSAPLSAAFAVFLIY
PVGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMIGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKFGQ
EEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVICIWITSLGISTMAFNLNGFNFNQSVLDAQGRVVPTWADVL
NRSNLGMEVMHERNAHNFPLDLAAAESTPVALIAPAIG
>Mature_357_residues
TTTIRSGRLSGWESFCNWVTSTNNRIYVGWFGVLMVPTLLAAAICFTIAFIAAPPVDIDGIREPVAGSFLYGNNIISGAV
VPSSNAIGLHFYPIWEAASVDEWLYNGGPYQLVVFHFLIGICCWLGRQWELSYRLGMRPWICVAYSAPLSAAFAVFLIYP
VGQGSFSDGMPLGISGTFNFMLVFQAEHNILMHPFHMIGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKFGQE
EETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVICIWITSLGISTMAFNLNGFNFNQSVLDAQGRVVPTWADVLN
RSNLGMEVMHERNAHNFPLDLAAAESTPVALIAPAIG

Specific function: This is one of the two reaction center proteins of photosystem II [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the reaction center pufL/M/psbA/D family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000484
- InterPro:   IPR005867 [H]

Pfam domain/function: PF00124 Photo_RC [H]

EC number: NA

Molecular weight: Translated: 39413; Mature: 39281

Theoretical pI: Translated: 5.96; Mature: 5.96

Prosite motif: PS00244 REACTION_CENTER

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTTIRSGRLSGWESFCNWVTSTNNRIYVGWFGVLMVPTLLAAAICFTIAFIAAPPVDID
CCCCCCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GIREPVAGSFLYGNNIISGAVVPSSNAIGLHFYPIWEAASVDEWLYNGGPYQLVVFHFLI
CCCCCCCCCEEECCCEEECEEECCCCEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHH
GICCWLGRQWELSYRLGMRPWICVAYSAPLSAAFAVFLIYPVGQGSFSDGMPLGISGTFN
HHHHHCCCCEEEEEECCCCCEEEEEECCCHHHHEEEEEEEECCCCCCCCCCCEEECCCEE
FMLVFQAEHNILMHPFHMIGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKFGQ
EEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVICIWITSLGISTMAFNLNGFN
CCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCC
FNQSVLDAQGRVVPTWADVLNRSNLGMEVMHERNAHNFPLDLAAAESTPVALIAPAIG
CCHHHHCCCCCEEEHHHHHHCCCCCCHHHHHHCCCCCCCEEEECCCCCCEEEEECCCC
>Mature Secondary Structure 
TTTIRSGRLSGWESFCNWVTSTNNRIYVGWFGVLMVPTLLAAAICFTIAFIAAPPVDID
CCCCCCCCCCCHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
GIREPVAGSFLYGNNIISGAVVPSSNAIGLHFYPIWEAASVDEWLYNGGPYQLVVFHFLI
CCCCCCCCCEEECCCEEECEEECCCCEEEEEEEECCCCCCHHHHHHCCCCHHHHHHHHHH
GICCWLGRQWELSYRLGMRPWICVAYSAPLSAAFAVFLIYPVGQGSFSDGMPLGISGTFN
HHHHHCCCCEEEEEECCCCCEEEEEECCCHHHHEEEEEEEECCCCCCCCCCCEEECCCEE
FMLVFQAEHNILMHPFHMIGVAGMFGGSLFSAMHGSLVTSSLIRETTETESQNYGYKFGQ
EEEEEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
EEETYNIVAAHGYFGRLIFQYASFNNSRSLHFFLAAWPVICIWITSLGISTMAFNLNGFN
CCCCEEEEEECCHHHHHHHHHHCCCCCCCEEEHHHHHHHHHHHHHHCCCEEEEEEECCCC
FNQSVLDAQGRVVPTWADVLNRSNLGMEVMHERNAHNFPLDLAAAESTPVALIAPAIG
CCHHHHCCCCCEEEHHHHHHCCCCCCHHHHHHCCCCCCCEEEECCCCCCEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA