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The map label for this gene is ynaI [H]

Identifier: 33863791

GI number: 33863791

Start: 1615031

End: 1616143

Strand: Reverse

Name: ynaI [H]

Synonym: PMT1524

Alternate gene names: 33863791

Gene position: 1616143-1615031 (Counterclockwise)

Preceding gene: 33863796

Following gene: 33863781

Centisome position: 67.04

GC content: 46.63

Gene sequence:

>1113_bases
ATGCCTCTGATGACACCCCTTCCCTTCAATCTTCAGGTGCCGATTGCCGGGCTTGTTTTAGCCATTGTCAGTTGGTTGTT
GCTAGACACTTTTGGCAGGCGGTTCCGCTCAGGTTCGTTGCGGCGTGGATTGCTGCTCAGTAGCAGGCAAAGCATTTCTC
TGAGTTGCGCACTTGTAGGAGTGATTTGTTGGCTGTTGGATTTGTTGGATCCGTCATTGATTCAATTCCCGCGTGATGGT
GTTAAGGCGTTTGGAATTCTTGTGGTCATAGGTCTTTCATGGACGCTGCTGTCTTGGAAGAAGGAGCTCAAGCAAAACCA
AGACAGTTATGCCACTCAGATGCTGCAGGGCTTTGGTGAAAAAGACAGGCTGTTCCTATTCGATGTTGTTCAGAAGACCA
TAGGTATTGCAGCCATGCTCATTTTATGCCTGGAGGTGATGCATCTGATGGGCATTTCGCCGGCTGTACTGGTTACCGCC
GGTGGGGTTGGCGCCGTTGCATTGGGTTTCGGGGCCAAGGGGATTGTCTCGAATTCCTTAAGCGGCCTTAGCCTTTACAT
TAACCGTCCGTTTGTTGTAAGTGATTTCATCGATATTCCCTCCGAAAACCTTTCTGGGAATGTAGAACATATCGGTTGGT
TTTATACCAAATTGCGCTCCTCTGATCGCCAACCAGTGTATATACCAAACAACATCTTTACAAGTAAGCCGGTTGTTAAT
ATTGCTGATATAGACAACCGTAGGATTTGGATTGAATTTGGTGTTAATTATGGCGATCGTAGAAAGATTGAGTCGATTGT
GAGTGATCTTCAGCAGGTTTTAGTTAATCATTCAGATGTAGATCAGAGCAAGAAAATGGCCGTGAATTTCACCGGCTATG
GCGATTCGAGTCTGAATCTACGCTTGGTTTGTTATTCCTCTAGTGGAAATCTAAGCGATGCTTGGGCCTTGCAGCAGAGG
TTGCTTCTCAAGATTGGTGATGTGGTTGAAGTGCATGGTGCCGGCATGCCATTCCCCACCCGCACTTTGATTCATTCAGG
CTCGAATCAAAAAAAGCAAACGATGAACCCTCTGATAGGAATCAATCAAGAATCGGGAGAAGGTGCAACTTGA

Upstream 100 bases:

>100_bases
AATTCGCTAATCAGCGCCGGCCAGCCGTTTGGCAGCGATTGGCTGATGGCACCACTAACGCTTCGCAGACAATTCAAATC
TGTGCGGATGCATCTTGCTT

Downstream 100 bases:

>100_bases
CCCTCCCCGATTTGCTTTTCAATTTCTAATGGCTCAACTGGATTATCGGCAGCCTTGAACAGAAATCCGGTAACTGAATC
CTGTTGCGCCTGGATCCTTT

Product: small mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 370; Mature: 369

Protein sequence:

>370_residues
MPLMTPLPFNLQVPIAGLVLAIVSWLLLDTFGRRFRSGSLRRGLLLSSRQSISLSCALVGVICWLLDLLDPSLIQFPRDG
VKAFGILVVIGLSWTLLSWKKELKQNQDSYATQMLQGFGEKDRLFLFDVVQKTIGIAAMLILCLEVMHLMGISPAVLVTA
GGVGAVALGFGAKGIVSNSLSGLSLYINRPFVVSDFIDIPSENLSGNVEHIGWFYTKLRSSDRQPVYIPNNIFTSKPVVN
IADIDNRRIWIEFGVNYGDRRKIESIVSDLQQVLVNHSDVDQSKKMAVNFTGYGDSSLNLRLVCYSSSGNLSDAWALQQR
LLLKIGDVVEVHGAGMPFPTRTLIHSGSNQKKQTMNPLIGINQESGEGAT

Sequences:

>Translated_370_residues
MPLMTPLPFNLQVPIAGLVLAIVSWLLLDTFGRRFRSGSLRRGLLLSSRQSISLSCALVGVICWLLDLLDPSLIQFPRDG
VKAFGILVVIGLSWTLLSWKKELKQNQDSYATQMLQGFGEKDRLFLFDVVQKTIGIAAMLILCLEVMHLMGISPAVLVTA
GGVGAVALGFGAKGIVSNSLSGLSLYINRPFVVSDFIDIPSENLSGNVEHIGWFYTKLRSSDRQPVYIPNNIFTSKPVVN
IADIDNRRIWIEFGVNYGDRRKIESIVSDLQQVLVNHSDVDQSKKMAVNFTGYGDSSLNLRLVCYSSSGNLSDAWALQQR
LLLKIGDVVEVHGAGMPFPTRTLIHSGSNQKKQTMNPLIGINQESGEGAT
>Mature_369_residues
PLMTPLPFNLQVPIAGLVLAIVSWLLLDTFGRRFRSGSLRRGLLLSSRQSISLSCALVGVICWLLDLLDPSLIQFPRDGV
KAFGILVVIGLSWTLLSWKKELKQNQDSYATQMLQGFGEKDRLFLFDVVQKTIGIAAMLILCLEVMHLMGISPAVLVTAG
GVGAVALGFGAKGIVSNSLSGLSLYINRPFVVSDFIDIPSENLSGNVEHIGWFYTKLRSSDRQPVYIPNNIFTSKPVVNI
ADIDNRRIWIEFGVNYGDRRKIESIVSDLQQVLVNHSDVDQSKKMAVNFTGYGDSSLNLRLVCYSSSGNLSDAWALQQRL
LLKIGDVVEVHGAGMPFPTRTLIHSGSNQKKQTMNPLIGINQESGEGAT

Specific function: Unknown

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI1787591, Length=325, Percent_Identity=31.0769230769231, Blast_Score=166, Evalue=3e-42,
Organism=Escherichia coli, GI1789291, Length=195, Percent_Identity=25.6410256410256, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI1786670, Length=157, Percent_Identity=31.8471337579618, Blast_Score=67, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR006686
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 40609; Mature: 40478

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPLMTPLPFNLQVPIAGLVLAIVSWLLLDTFGRRFRSGSLRRGLLLSSRQSISLSCALVG
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHH
VICWLLDLLDPSLIQFPRDGVKAFGILVVIGLSWTLLSWKKELKQNQDSYATQMLQGFGE
HHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
KDRLFLFDVVQKTIGIAAMLILCLEVMHLMGISPAVLVTAGGVGAVALGFGAKGIVSNSL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHEEECCCCCHHHHCCC
SGLSLYINRPFVVSDFIDIPSENLSGNVEHIGWFYTKLRSSDRQPVYIPNNIFTSKPVVN
CCEEEEEECCEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEE
IADIDNRRIWIEFGVNYGDRRKIESIVSDLQQVLVNHSDVDQSKKMAVNFTGYGDSSLNL
EEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEE
RLVCYSSSGNLSDAWALQQRLLLKIGDVVEVHGAGMPFPTRTLIHSGSNQKKQTMNPLIG
EEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCCHHHHCCCCEE
INQESGEGAT
CCCCCCCCCC
>Mature Secondary Structure 
PLMTPLPFNLQVPIAGLVLAIVSWLLLDTFGRRFRSGSLRRGLLLSSRQSISLSCALVG
CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCCCCHHHHHHH
VICWLLDLLDPSLIQFPRDGVKAFGILVVIGLSWTLLSWKKELKQNQDSYATQMLQGFGE
HHHHHHHHHCHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
KDRLFLFDVVQKTIGIAAMLILCLEVMHLMGISPAVLVTAGGVGAVALGFGAKGIVSNSL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCHHHEEECCCCCHHHHCCC
SGLSLYINRPFVVSDFIDIPSENLSGNVEHIGWFYTKLRSSDRQPVYIPNNIFTSKPVVN
CCEEEEEECCEEEEHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCEEECCCCCCCCCEEE
IADIDNRRIWIEFGVNYGDRRKIESIVSDLQQVLVNHSDVDQSKKMAVNFTGYGDSSLNL
EEECCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCEE
RLVCYSSSGNLSDAWALQQRLLLKIGDVVEVHGAGMPFPTRTLIHSGSNQKKQTMNPLIG
EEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCCCCCCHHHHCCCCCCHHHHCCCCEE
INQESGEGAT
CCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]