Click here to switch to the map view.

The map label for this gene is atpB [H]

Identifier: 33863718

GI number: 33863718

Start: 1537700

End: 1539166

Strand: Direct

Name: atpB [H]

Synonym: PMT1451

Alternate gene names: 33863718

Gene position: 1537700-1539166 (Clockwise)

Preceding gene: 33863715

Following gene: 33863719

Centisome position: 63.78

GC content: 55.76

Gene sequence:

>1467_bases
ATGGCCGCTGCAGCTACCGCCACCGCCGGCACCAAGGGCGTCATTCGTCAGGTGATTGGCCCGGTTCTGGATGTGGAATT
CCCTGCCGGCAAGCTGCCCAAGATCCTCAATGCCCTTCGCATTGAGGGCAAGAACCCATCCGGTCAGGATGTTGCCATCA
CTGCCGAAGTGCAGCAACTCCTCGGCGACCATCGAGTGCGTGCGGTCTCCATGAGCAGCACGGATGGTCTGGTTCGTGGC
ATGGAAGCCCTCGACACCGGCGCTGCAATTTCCGTGCCCGTTGGTGAAGCCACTCTGGGCAGGATCTTCAACGTGCTCGG
CGAACCAGTTGATGAGCAGGGTCCTGTTACAACCGATGCAACTGCCCCGATTCACAGACCATCACCAAAACTCACTGAGC
TAGAGACCAAACCAACAGTTTTTGAAACTGGCATCAAGGTGATTGATCTCCTGGCTCCTTACCGTCAAGGCGGCAAGGTT
GGCCTCTTCGGTGGTGCCGGTGTTGGCAAGACCGTGCTGATTCAGGAGCTGATCAATAACATCGCCAAAGAACACGGTGG
TGTGTCTGTCTTTGGTGGTGTGGGCGAGCGCACTCGTGAAGGCAACGACCTCTACGAGGAATTCAAAGAATCCGGAGTGA
TCAACTCCGACGACCTATCGAAGTCGAAGGTAGCTCTTTGCTTCGGGCAGATGAATGAGCCCCCTGGCGCCCGGATGCGC
GTTGGGCTTTCAGCTCTCACCATGGCTGAGCACTTCCGCGACGTGAACAAGCAAGACGTGCTGCTGTTCATCGACAACAT
CTTCCGTTTTGTGCAAGCCGGATCAGAAGTTTCTGCTTTGTTGGGTCGCATGCCTTCCGCCGTGGGTTACCAGCCCACCC
TTGGCACCGACGTTGGTGCACTTCAAGAGCGCATCACATCAACCCTAGAGGGATCGATTACCTCGATTCAGGCCGTCTAC
GTTCCCGCTGATGACCTCACCGACCCCGCACCAGCCACAACATTTGCCCACTTAGACGCCACAACTGTGCTGGCTCGTGC
ATTGGCCGCCAAGGGCATTTACCCAGCTGTGGATCCTTTGGATTCCACCAGCACCATGCTTCAGCCATCAGTTGTTGGTG
ATGAGCATTACCGCACAGCACGAAGCGTGCAGGCCACACTCCAGCGCTACAAGGAACTGCAAGACATCATTGCCATCCTT
GGTCTCGACGAACTCTCAGAAGATGATCGCCGCACAGTAGATCGAGCCCGCAAGATTGAGAAGTTCCTTTCCCAGCCTTT
CTTTGTCGCCGAGATTTTTACCGGCATGTCCGGCAAGTACGTCAAGCTGGAAGAAACCATCGCCGGCTTCAATATGATCA
TGTCCGGTGAACTAGACCATCTCCCTGAGCAAGCCTTCTACCTGGTTGGCAACATCGACGAGGTCAAAGCTAAGGCCGAG
AAGATGGCTTCAGAAGCAAAGGGTTGA

Upstream 100 bases:

>100_bases
CACCGAACCCTGAGAAGATCTCGCCATGCAGTGGTAATGTTGCGCCGCTCTGAAAGGGAATGCGTTAGACACGCAACCCC
TTGCAAAACTCTATTTTCTT

Downstream 100 bases:

>100_bases
AGCCCAGCGGGGAGTGAGACATCTCCCCGCTAATCACTTTCATCCCCATTCAGTTTCTCCACGTCAAACCCAAGCCTCCG
AACCATGTCTCTCACCCTCC

Product: F0F1 ATP synthase subunit beta

Products: NA

Alternate protein names: ATP synthase F1 sector subunit beta; F-ATPase subunit beta [H]

Number of amino acids: Translated: 488; Mature: 487

Protein sequence:

>488_residues
MAAAATATAGTKGVIRQVIGPVLDVEFPAGKLPKILNALRIEGKNPSGQDVAITAEVQQLLGDHRVRAVSMSSTDGLVRG
MEALDTGAAISVPVGEATLGRIFNVLGEPVDEQGPVTTDATAPIHRPSPKLTELETKPTVFETGIKVIDLLAPYRQGGKV
GLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVINSDDLSKSKVALCFGQMNEPPGARMR
VGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERITSTLEGSITSIQAVY
VPADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKELQDIIAIL
GLDELSEDDRRTVDRARKIEKFLSQPFFVAEIFTGMSGKYVKLEETIAGFNMIMSGELDHLPEQAFYLVGNIDEVKAKAE
KMASEAKG

Sequences:

>Translated_488_residues
MAAAATATAGTKGVIRQVIGPVLDVEFPAGKLPKILNALRIEGKNPSGQDVAITAEVQQLLGDHRVRAVSMSSTDGLVRG
MEALDTGAAISVPVGEATLGRIFNVLGEPVDEQGPVTTDATAPIHRPSPKLTELETKPTVFETGIKVIDLLAPYRQGGKV
GLFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVINSDDLSKSKVALCFGQMNEPPGARMR
VGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERITSTLEGSITSIQAVY
VPADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKELQDIIAIL
GLDELSEDDRRTVDRARKIEKFLSQPFFVAEIFTGMSGKYVKLEETIAGFNMIMSGELDHLPEQAFYLVGNIDEVKAKAE
KMASEAKG
>Mature_487_residues
AAAATATAGTKGVIRQVIGPVLDVEFPAGKLPKILNALRIEGKNPSGQDVAITAEVQQLLGDHRVRAVSMSSTDGLVRGM
EALDTGAAISVPVGEATLGRIFNVLGEPVDEQGPVTTDATAPIHRPSPKLTELETKPTVFETGIKVIDLLAPYRQGGKVG
LFGGAGVGKTVLIQELINNIAKEHGGVSVFGGVGERTREGNDLYEEFKESGVINSDDLSKSKVALCFGQMNEPPGARMRV
GLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGALQERITSTLEGSITSIQAVYV
PADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPLDSTSTMLQPSVVGDEHYRTARSVQATLQRYKELQDIIAILG
LDELSEDDRRTVDRARKIEKFLSQPFFVAEIFTGMSGKYVKLEETIAGFNMIMSGELDHLPEQAFYLVGNIDEVKAKAEK
MASEAKG

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane. The catalytic sites are hosted primarily by the beta subunits [H]

COG id: COG0055

COG function: function code C; F0F1-type ATP synthase, beta subunit

Gene ontology:

Cell location: Cellular thylakoid membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase alpha/beta chains family [H]

Homologues:

Organism=Homo sapiens, GI32189394, Length=473, Percent_Identity=67.4418604651163, Blast_Score=642, Evalue=0.0,
Organism=Homo sapiens, GI19913424, Length=306, Percent_Identity=29.4117647058824, Blast_Score=106, Evalue=5e-23,
Organism=Homo sapiens, GI19913428, Length=368, Percent_Identity=26.6304347826087, Blast_Score=103, Evalue=4e-22,
Organism=Homo sapiens, GI19913426, Length=381, Percent_Identity=25.9842519685039, Blast_Score=101, Evalue=1e-21,
Organism=Homo sapiens, GI50345984, Length=412, Percent_Identity=24.7572815533981, Blast_Score=82, Evalue=1e-15,
Organism=Homo sapiens, GI4757810, Length=412, Percent_Identity=24.7572815533981, Blast_Score=82, Evalue=1e-15,
Organism=Escherichia coli, GI1790170, Length=470, Percent_Identity=63.8297872340426, Blast_Score=595, Evalue=1e-171,
Organism=Escherichia coli, GI1788251, Length=349, Percent_Identity=30.945558739255, Blast_Score=130, Evalue=2e-31,
Organism=Escherichia coli, GI1790172, Length=431, Percent_Identity=23.6658932714617, Blast_Score=98, Evalue=1e-21,
Organism=Caenorhabditis elegans, GI25144756, Length=485, Percent_Identity=64.9484536082474, Blast_Score=626, Evalue=1e-180,
Organism=Caenorhabditis elegans, GI17570191, Length=435, Percent_Identity=26.4367816091954, Blast_Score=111, Evalue=8e-25,
Organism=Caenorhabditis elegans, GI17510931, Length=361, Percent_Identity=26.8698060941828, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI17565854, Length=324, Percent_Identity=28.0864197530864, Blast_Score=108, Evalue=8e-24,
Organism=Caenorhabditis elegans, GI71988080, Length=359, Percent_Identity=23.6768802228412, Blast_Score=82, Evalue=7e-16,
Organism=Caenorhabditis elegans, GI71988063, Length=359, Percent_Identity=23.6768802228412, Blast_Score=82, Evalue=8e-16,
Organism=Saccharomyces cerevisiae, GI6322581, Length=475, Percent_Identity=66.1052631578947, Blast_Score=627, Evalue=0.0,
Organism=Saccharomyces cerevisiae, GI6319603, Length=438, Percent_Identity=25.5707762557078, Blast_Score=103, Evalue=7e-23,
Organism=Saccharomyces cerevisiae, GI6319370, Length=388, Percent_Identity=25, Blast_Score=80, Evalue=1e-15,
Organism=Saccharomyces cerevisiae, GI6320016, Length=254, Percent_Identity=25.9842519685039, Blast_Score=70, Evalue=9e-13,
Organism=Drosophila melanogaster, GI24638766, Length=475, Percent_Identity=65.8947368421053, Blast_Score=633, Evalue=0.0,
Organism=Drosophila melanogaster, GI28574560, Length=484, Percent_Identity=65.2892561983471, Blast_Score=615, Evalue=1e-176,
Organism=Drosophila melanogaster, GI24583992, Length=324, Percent_Identity=29.0123456790123, Blast_Score=114, Evalue=2e-25,
Organism=Drosophila melanogaster, GI20129479, Length=431, Percent_Identity=26.2180974477958, Blast_Score=111, Evalue=1e-24,
Organism=Drosophila melanogaster, GI24583988, Length=324, Percent_Identity=28.7037037037037, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24583986, Length=324, Percent_Identity=28.7037037037037, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI24583984, Length=324, Percent_Identity=28.7037037037037, Blast_Score=110, Evalue=2e-24,
Organism=Drosophila melanogaster, GI281361666, Length=365, Percent_Identity=26.8493150684932, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24646341, Length=365, Percent_Identity=26.8493150684932, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI17136796, Length=365, Percent_Identity=26.8493150684932, Blast_Score=110, Evalue=3e-24,
Organism=Drosophila melanogaster, GI24638768, Length=97, Percent_Identity=48.4536082474227, Blast_Score=84, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24658560, Length=382, Percent_Identity=23.5602094240838, Blast_Score=77, Evalue=4e-14,

Paralogues:

None

Copy number: 10836 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 8,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020003
- InterPro:   IPR000194
- InterPro:   IPR003593
- InterPro:   IPR005722
- InterPro:   IPR018118
- InterPro:   IPR000793
- InterPro:   IPR004100 [H]

Pfam domain/function: PF00006 ATP-synt_ab; PF00306 ATP-synt_ab_C; PF02874 ATP-synt_ab_N [H]

EC number: =3.6.3.14 [H]

Molecular weight: Translated: 52137; Mature: 52006

Theoretical pI: Translated: 4.80; Mature: 4.80

Prosite motif: PS00152 ATPASE_ALPHA_BETA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAAATATAGTKGVIRQVIGPVLDVEFPAGKLPKILNALRIEGKNPSGQDVAITAEVQQL
CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHH
LGDHRVRAVSMSSTDGLVRGMEALDTGAAISVPVGEATLGRIFNVLGEPVDEQGPVTTDA
HCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCC
TAPIHRPSPKLTELETKPTVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
IAKEHGGVSVFGGVGERTREGNDLYEEFKESGVINSDDLSKSKVALCFGQMNEPPGARMR
HHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEE
VGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHH
LQERITSTLEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPL
HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
DSTSTMLQPSVVGDEHYRTARSVQATLQRYKELQDIIAILGLDELSEDDRRTVDRARKIE
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH
KFLSQPFFVAEIFTGMSGKYVKLEETIAGFNMIMSGELDHLPEQAFYLVGNIDEVKAKAE
HHHCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCHHHCCHHHEEEECCHHHHHHHHH
KMASEAKG
HHHHHCCC
>Mature Secondary Structure 
AAAATATAGTKGVIRQVIGPVLDVEFPAGKLPKILNALRIEGKNPSGQDVAITAEVQQL
CCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCCCCCEEEHHHHHHH
LGDHRVRAVSMSSTDGLVRGMEALDTGAAISVPVGEATLGRIFNVLGEPVDEQGPVTTDA
HCCCCEEEEECCCCCHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHCCCCCCCCCCCCCC
TAPIHRPSPKLTELETKPTVFETGIKVIDLLAPYRQGGKVGLFGGAGVGKTVLIQELINN
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCHHHHHHHHHHH
IAKEHGGVSVFGGVGERTREGNDLYEEFKESGVINSDDLSKSKVALCFGQMNEPPGARMR
HHHHCCCEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEE
VGLSALTMAEHFRDVNKQDVLLFIDNIFRFVQAGSEVSALLGRMPSAVGYQPTLGTDVGA
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCCCCCHHH
LQERITSTLEGSITSIQAVYVPADDLTDPAPATTFAHLDATTVLARALAAKGIYPAVDPL
HHHHHHHHHCCCCEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCC
DSTSTMLQPSVVGDEHYRTARSVQATLQRYKELQDIIAILGLDELSEDDRRTVDRARKIE
CCCHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCCHHHHHHHHHHHHH
KFLSQPFFVAEIFTGMSGKYVKLEETIAGFNMIMSGELDHLPEQAFYLVGNIDEVKAKAE
HHHCCCHHHHHHHHCCCCCEEEHHHHHHHHHHHCCCCHHHCCHHHEEEECCHHHHHHHHH
KMASEAKG
HHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA