| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is lpxA [H]
Identifier: 33863677
GI number: 33863677
Start: 1496576
End: 1497427
Strand: Reverse
Name: lpxA [H]
Synonym: PMT1410
Alternate gene names: 33863677
Gene position: 1497427-1496576 (Counterclockwise)
Preceding gene: 33863678
Following gene: 33863676
Centisome position: 62.11
GC content: 54.93
Gene sequence:
>852_bases ATGAGCGAGGTGAGCAAACTCTCAGCGATCACTGCAGAAAAAAAGGCTCAGGTTCACCCTGCGGCTGTGGTGGATCCTCG TGCTGAGCTCGCTTCCGGTGTCATTGTTGGGCCGGGAGCAGTGATTGGACCTGATGTCAAGATTGGTCCTGATACTTGGA TTGGCCCCCATGTGGTGCTCGATGGCCGTTTGACCCTTGGCGCCAATAACCGGGTTTTCCCCGGAGCCTGCCTTGGTCTT GAGCCACAGGACCTCAAGTATCGCGGCGCACCTACAGAGGTGGTGATTGGCGATGCCAACACAATTAGGGAATACGTCAC CATCAACCGTGCCACGGAGGAAGGTGAACAGACCAAGATCGGTAATCACAACTTGTTGATGGCCTATTGCCACCTTGGTC ACAACTGTGTGCTGGGCAATGGGATTGTGATGTCGAATGGAATTCAAATGGCTGGTCATGTCTTGGTCGAAGACCGGGCC GTGATCGGTGGCTGCTTAGGAATTCACCAATTCGTTCACATTGGCAGTCTTGCCATGGTGGGAGGCATGACAAGGGTTGA TCGCGATGTCCCCCCGTACTGCCTCGCCGAAGGGCATCCAGGTCGATTGAGGGGTCTCAATCGCGTTGGCCTGCGGCGCA GTGGTCTGAAGACTCAAGAGGGAGGAGAACTTGTCCAGTTGCAAGAGATTTGGAATTTGCTGTTTCGATCTGACCATGTC TTTGTTGAGGGGTTGCGGCTTGCTCGACAAGAGCAGTTGATGCCAGCGGGTGCACACCTCTGTGCCTTTCTGGAGGCCTC GATTGAGAAGGGACGTCGTGGTCCTATGCCTGCGATGTCTTTGAGTCGCTGA
Upstream 100 bases:
>100_bases TGAAGCGGCAGCGCTTTGGCAAGGTCAGGGGTGAAGCCAGGGTGGAGGGCCAGCTGGTTTGCTCTGGTGAGTTGATGTTT TCCTTGGTGGACTGAGGATC
Downstream 100 bases:
>100_bases TGGTGCGCCTGCTGATCAGCACTGGCGAGGTCTCTGGTGATTTGCAGGGAAGTCTCTTGATTCAAGCTCTCCAAAGGGAG GTTGAACGGCGTTCCTTACC
Product: UDP-N-acetylglucosamine acyltransferase
Products: NA
Alternate protein names: UDP-N-acetylglucosamine acyltransferase [H]
Number of amino acids: Translated: 283; Mature: 282
Protein sequence:
>283_residues MSEVSKLSAITAEKKAQVHPAAVVDPRAELASGVIVGPGAVIGPDVKIGPDTWIGPHVVLDGRLTLGANNRVFPGACLGL EPQDLKYRGAPTEVVIGDANTIREYVTINRATEEGEQTKIGNHNLLMAYCHLGHNCVLGNGIVMSNGIQMAGHVLVEDRA VIGGCLGIHQFVHIGSLAMVGGMTRVDRDVPPYCLAEGHPGRLRGLNRVGLRRSGLKTQEGGELVQLQEIWNLLFRSDHV FVEGLRLARQEQLMPAGAHLCAFLEASIEKGRRGPMPAMSLSR
Sequences:
>Translated_283_residues MSEVSKLSAITAEKKAQVHPAAVVDPRAELASGVIVGPGAVIGPDVKIGPDTWIGPHVVLDGRLTLGANNRVFPGACLGL EPQDLKYRGAPTEVVIGDANTIREYVTINRATEEGEQTKIGNHNLLMAYCHLGHNCVLGNGIVMSNGIQMAGHVLVEDRA VIGGCLGIHQFVHIGSLAMVGGMTRVDRDVPPYCLAEGHPGRLRGLNRVGLRRSGLKTQEGGELVQLQEIWNLLFRSDHV FVEGLRLARQEQLMPAGAHLCAFLEASIEKGRRGPMPAMSLSR >Mature_282_residues SEVSKLSAITAEKKAQVHPAAVVDPRAELASGVIVGPGAVIGPDVKIGPDTWIGPHVVLDGRLTLGANNRVFPGACLGLE PQDLKYRGAPTEVVIGDANTIREYVTINRATEEGEQTKIGNHNLLMAYCHLGHNCVLGNGIVMSNGIQMAGHVLVEDRAV IGGCLGIHQFVHIGSLAMVGGMTRVDRDVPPYCLAEGHPGRLRGLNRVGLRRSGLKTQEGGELVQLQEIWNLLFRSDHVF VEGLRLARQEQLMPAGAHLCAFLEASIEKGRRGPMPAMSLSR
Specific function: Involved in the biosynthesis of lipid A, a phosphorylated glycolipid that anchors the lipopolysaccharide to the outer membrane of the cell [H]
COG id: COG1043
COG function: function code M; Acyl-[acyl carrier protein]--UDP-N-acetylglucosamine O-acyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family. LpxA subfamily [H]
Homologues:
Organism=Escherichia coli, GI1786378, Length=226, Percent_Identity=42.0353982300885, Blast_Score=183, Evalue=1e-47,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR010137 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: =2.3.1.129 [H]
Molecular weight: Translated: 30316; Mature: 30184
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEVSKLSAITAEKKAQVHPAAVVDPRAELASGVIVGPGAVIGPDVKIGPDTWIGPHVVL CCHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCEEECCCCEECCCCEECCCCCCCCEEEE DGRLTLGANNRVFPGACLGLEPQDLKYRGAPTEVVIGDANTIREYVTINRATEEGEQTKI CCEEEECCCCCCCCCEEECCCCCCCEECCCCCEEEECCHHHHHHHHEEECCCCCCCCCCC GNHNLLMAYCHLGHNCVLGNGIVMSNGIQMAGHVLVEDRAVIGGCLGIHQFVHIGSLAMV CCCCEEEEEECCCCCEEEECCEEEECCCEEECEEEEECCHHHHHHHHHHHHHHHHHHHHH GGMTRVDRDVPPYCLAEGHPGRLRGLNRVGLRRSGLKTQEGGELVQLQEIWNLLFRSDHV CCCHHHCCCCCCCEECCCCCHHHCCCHHHCCHHCCCCCCCCCCEEEHHHHHHHHHCCCCH FVEGLRLARQEQLMPAGAHLCAFLEASIEKGRRGPMPAMSLSR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure SEVSKLSAITAEKKAQVHPAAVVDPRAELASGVIVGPGAVIGPDVKIGPDTWIGPHVVL CHHHHHHHHHHHHHCCCCCCEEECCHHHHHCCEEECCCCEECCCCEECCCCCCCCEEEE DGRLTLGANNRVFPGACLGLEPQDLKYRGAPTEVVIGDANTIREYVTINRATEEGEQTKI CCEEEECCCCCCCCCEEECCCCCCCEECCCCCEEEECCHHHHHHHHEEECCCCCCCCCCC GNHNLLMAYCHLGHNCVLGNGIVMSNGIQMAGHVLVEDRAVIGGCLGIHQFVHIGSLAMV CCCCEEEEEECCCCCEEEECCEEEECCCEEECEEEEECCHHHHHHHHHHHHHHHHHHHHH GGMTRVDRDVPPYCLAEGHPGRLRGLNRVGLRRSGLKTQEGGELVQLQEIWNLLFRSDHV CCCHHHCCCCCCCEECCCCCHHHCCCHHHCCHHCCCCCCCCCCEEEHHHHHHHHHCCCCH FVEGLRLARQEQLMPAGAHLCAFLEASIEKGRRGPMPAMSLSR HHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA