| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is plsY
Identifier: 33863668
GI number: 33863668
Start: 1488074
End: 1488649
Strand: Direct
Name: plsY
Synonym: PMT1401
Alternate gene names: 33863668
Gene position: 1488074-1488649 (Clockwise)
Preceding gene: 33863667
Following gene: 33863672
Centisome position: 61.72
GC content: 58.68
Gene sequence:
>576_bases ATGGGGTATCTACTGGGTTCACTGCCCAGCGGATATCTTGCAGCCCACTGGCTGGCAGGAATCGACCTGCGTGAGAAGGG TTCTGGATCAACCGGGGCCACCAATGTGCTGCGCCAGGTGGGTAAAGGTCCTGCCCTAGCCGTTTTCCTTATCGATGTTG GCAAGGGCACAACCGCCGTACTGGTTGCTAGGGCACTTGAGCTGGATGATGGCTGGCAAGTTGCGGCAGGTCTAGCAGCC TTGGCAGGTCACATCTGGCCTGTTTGGCTGGGATGGAAAGGTGGCAAAGCTGTCGCAACAGGTCTGGGGATGCTGCTAGG CATCTCCTGGCCTGTAGGACTGGCCTGTTTCGGCATCTTCCTCACTGTGCTGAGCTTCAGCAGGATCGTGTCTTTATCGA GCATTATCGCCGCCCTAAGCTTACCGTTGCTGATGATCTTGCGCTTTCAAGGCAACTCACCGCCGGCTTACCTGGCGGTG GCCTTTGCCGCCATGGCAATGGTGGTGTGGCGACACCGCTCCAATCTGCAACGCTTGCTGGCGGGCACCGAACCTCGCCT CGGTCAGTCCAGCTGA
Upstream 100 bases:
>100_bases TCTGGCTAGCCTTTGCAGCTGGGCCGCAAGAACGGTTCGAAGACGAAGAACTGCTCTGATGATGTTCAATTCTCTATTTG GGAATCTTCTCTCCCTAGTC
Downstream 100 bases:
>100_bases CGCTGTTCAATCTCAAGGCAGCAGCGTGCAAACGCTTCTGCCGGATCAACAGCACGGGTAATCGGCCTGCCAATCACCAA ACGTGAAGCTCCTGCATTCA
Product: membrane protein
Products: NA
Alternate protein names: Acyl-PO4 G3P acyltransferase; Acyl-phosphate--glycerol-3-phosphate acyltransferase; G3P acyltransferase; GPAT; Lysophosphatidic acid synthase; LPA synthase
Number of amino acids: Translated: 191; Mature: 190
Protein sequence:
>191_residues MGYLLGSLPSGYLAAHWLAGIDLREKGSGSTGATNVLRQVGKGPALAVFLIDVGKGTTAVLVARALELDDGWQVAAGLAA LAGHIWPVWLGWKGGKAVATGLGMLLGISWPVGLACFGIFLTVLSFSRIVSLSSIIAALSLPLLMILRFQGNSPPAYLAV AFAAMAMVVWRHRSNLQRLLAGTEPRLGQSS
Sequences:
>Translated_191_residues MGYLLGSLPSGYLAAHWLAGIDLREKGSGSTGATNVLRQVGKGPALAVFLIDVGKGTTAVLVARALELDDGWQVAAGLAA LAGHIWPVWLGWKGGKAVATGLGMLLGISWPVGLACFGIFLTVLSFSRIVSLSSIIAALSLPLLMILRFQGNSPPAYLAV AFAAMAMVVWRHRSNLQRLLAGTEPRLGQSS >Mature_190_residues GYLLGSLPSGYLAAHWLAGIDLREKGSGSTGATNVLRQVGKGPALAVFLIDVGKGTTAVLVARALELDDGWQVAAGLAAL AGHIWPVWLGWKGGKAVATGLGMLLGISWPVGLACFGIFLTVLSFSRIVSLSSIIAALSLPLLMILRFQGNSPPAYLAVA FAAMAMVVWRHRSNLQRLLAGTEPRLGQSS
Specific function: Catalyzes the transfer of an acyl group from acyl- phosphate (acyl-PO(4)) to glycerol-3-phosphate (G3P) to form lysophosphatidic acid (LPA). This enzyme utilizes acyl-phosphate as fatty acyl donor, but not acyl-CoA or acyl-ACP
COG id: COG0344
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the plsY family
Homologues:
Organism=Escherichia coli, GI1789439, Length=188, Percent_Identity=37.2340425531915, Blast_Score=98, Evalue=3e-22,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PLSY_PROMM (Q7V5Y3)
Other databases:
- EMBL: BX548175 - RefSeq: NP_895228.1 - STRING: Q7V5Y3 - GeneID: 1728238 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT1401 - NMPDR: fig|74547.1.peg.1395 - eggNOG: COG0344 - HOGENOM: HBG734487 - ProtClustDB: PRK14419 - BioCyc: PMAR74547:PMT1401-MONOMER - HAMAP: MF_01043 - InterPro: IPR003811 - TIGRFAMs: TIGR00023
Pfam domain/function: PF02660 DUF205
EC number: NA
Molecular weight: Translated: 19934; Mature: 19803
Theoretical pI: Translated: 10.76; Mature: 10.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xed36f00)-; HASH(0xef85910)-; HASH(0xe211dfc)-; HASH(0xd5f5e80)-; HASH(0xded4398)-;
Cys/Met content:
0.5 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGYLLGSLPSGYLAAHWLAGIDLREKGSGSTGATNVLRQVGKGPALAVFLIDVGKGTTAV CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHH LVARALELDDGWQVAAGLAALAGHIWPVWLGWKGGKAVATGLGMLLGISWPVGLACFGIF HHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHH LTVLSFSRIVSLSSIIAALSLPLLMILRFQGNSPPAYLAVAFAAMAMVVWRHRSNLQRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGTEPRLGQSS CCCCCCCCCCH >Mature Secondary Structure GYLLGSLPSGYLAAHWLAGIDLREKGSGSTGATNVLRQVGKGPALAVFLIDVGKGTTAV CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHCCCCEEEEEEEECCCCHHHH LVARALELDDGWQVAAGLAALAGHIWPVWLGWKGGKAVATGLGMLLGISWPVGLACFGIF HHHHHHCCCCCHHHHHHHHHHHHHHCEEEEECCCCHHHHHHHHHHHHCCCHHHHHHHHHH LTVLSFSRIVSLSSIIAALSLPLLMILRFQGNSPPAYLAVAFAAMAMVVWRHRSNLQRLL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH AGTEPRLGQSS CCCCCCCCCCH
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12917642