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The map label for this gene is 33863649

Identifier: 33863649

GI number: 33863649

Start: 1466670

End: 1467731

Strand: Reverse

Name: 33863649

Synonym: PMT1382

Alternate gene names: NA

Gene position: 1467731-1466670 (Counterclockwise)

Preceding gene: 33863651

Following gene: 33863648

Centisome position: 60.88

GC content: 41.43

Gene sequence:

>1062_bases
TTGAGGCTTTTCATGCGCTTAATTTGCTACGGTGGGCCAATGTATTATTTGACAGCCAACATGAACCGTTTTTTTAGAGC
TTTTCGCCCTCTTGGATTGCAGCGACGTTATAAGCTGAAAAAGCGAAGTGTGCATCGAATCCTCCCCATCGAGAACAAAG
AATTCCCTAAAACTCACCATGACAAGGGCTTGCAAGCCAAAGAAAAGTATAATTTCATCAAAAATAATGGCTATATAGTA
CTTCCAGGAGCAGTAAGTCCAGGTCTTTGCGATAAAATATCTAATTATTATGATTCTGTCCTCGCTAATGGAAGTCTTCA
GGTAAAGCCAAAATGCGAATTTTTTGACAAAGAAGGAAAATATTCTTATGGGGAAGAAATTGGAGATAGGGATCCGAGTC
AACTAATAGGCCTAAAAATGTTGGATTTATATTCGCACAATATTGATGCACGTGAGGCAATGTTTTCTCCTGATATCCAG
GAGGTATTGTCGTTGATATTTGGGGCAAACGCATTGGCTTTTCAGCAACTTGGAATCATTTACGGAACTGAGCAGGATTT
GCACCAAGACACAGCGTATGTTCGCGTCTCGGAGCCTTTCCTGATCGCTGCCTCATGGATTGCTCTTGAAGATATTACCC
CAGGCTCTGGCGAGCTTGAGCTAATACCTGGATCGCACAATTTGAAGGATAATTTTTTCAATTCTTCAGGCGATGAATGG
TGCAAAAAGGTTGAGAGCAATCCTTCTAAAAGTGCCTGGTGGAACTATAAAGATAAAGATATTCACGACAAATTTATTGG
CAGGCTTAGAAGCCTCAAAGCCCAGCAAGAGCCTTTCGTATTCAATGCTAAAAAGGGCGATTGCCTTATATGGATTTCGC
ATTTGGTCCATGGGGGGTCCCCAATATCAAGTAGGACGGGCAGCGGGATTCCAACAAGAAAGTCTCTGGTTACTCATTAC
TGTCCATTTCCTCAGGCTCACCCAATATACTTTCATCAAATCAATAATTCTGGCCCTATAGAATATAGCGACAATTCTCT
CTATTCTTACAAGTACCTGTAA

Upstream 100 bases:

>100_bases
ATTAACTACGGCCGAGCACATCATTAGGTTCAGCCGCAACCAACAGGAGATGCTTGATTCATAATTGAAGATTATTCGGC
AAAATTAAAGATACTCGTCA

Downstream 100 bases:

>100_bases
TCCGTTTAATTCGGCACGATAGCGAGATTCGCTAATAATCAAATCCCTAACGGGATTGCAGCGATTAATTCAATGATTCC
CAGCTGCGGCAGCATCAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: Phytanoyl-CoA Dioxygenase Family Protein

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MRLFMRLICYGGPMYYLTANMNRFFRAFRPLGLQRRYKLKKRSVHRILPIENKEFPKTHHDKGLQAKEKYNFIKNNGYIV
LPGAVSPGLCDKISNYYDSVLANGSLQVKPKCEFFDKEGKYSYGEEIGDRDPSQLIGLKMLDLYSHNIDAREAMFSPDIQ
EVLSLIFGANALAFQQLGIIYGTEQDLHQDTAYVRVSEPFLIAASWIALEDITPGSGELELIPGSHNLKDNFFNSSGDEW
CKKVESNPSKSAWWNYKDKDIHDKFIGRLRSLKAQQEPFVFNAKKGDCLIWISHLVHGGSPISSRTGSGIPTRKSLVTHY
CPFPQAHPIYFHQINNSGPIEYSDNSLYSYKYL

Sequences:

>Translated_353_residues
MRLFMRLICYGGPMYYLTANMNRFFRAFRPLGLQRRYKLKKRSVHRILPIENKEFPKTHHDKGLQAKEKYNFIKNNGYIV
LPGAVSPGLCDKISNYYDSVLANGSLQVKPKCEFFDKEGKYSYGEEIGDRDPSQLIGLKMLDLYSHNIDAREAMFSPDIQ
EVLSLIFGANALAFQQLGIIYGTEQDLHQDTAYVRVSEPFLIAASWIALEDITPGSGELELIPGSHNLKDNFFNSSGDEW
CKKVESNPSKSAWWNYKDKDIHDKFIGRLRSLKAQQEPFVFNAKKGDCLIWISHLVHGGSPISSRTGSGIPTRKSLVTHY
CPFPQAHPIYFHQINNSGPIEYSDNSLYSYKYL
>Mature_353_residues
MRLFMRLICYGGPMYYLTANMNRFFRAFRPLGLQRRYKLKKRSVHRILPIENKEFPKTHHDKGLQAKEKYNFIKNNGYIV
LPGAVSPGLCDKISNYYDSVLANGSLQVKPKCEFFDKEGKYSYGEEIGDRDPSQLIGLKMLDLYSHNIDAREAMFSPDIQ
EVLSLIFGANALAFQQLGIIYGTEQDLHQDTAYVRVSEPFLIAASWIALEDITPGSGELELIPGSHNLKDNFFNSSGDEW
CKKVESNPSKSAWWNYKDKDIHDKFIGRLRSLKAQQEPFVFNAKKGDCLIWISHLVHGGSPISSRTGSGIPTRKSLVTHY
CPFPQAHPIYFHQINNSGPIEYSDNSLYSYKYL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 40357; Mature: 40357

Theoretical pI: Translated: 8.83; Mature: 8.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLFMRLICYGGPMYYLTANMNRFFRAFRPLGLQRRYKLKKRSVHRILPIENKEFPKTHH
CHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DKGLQAKEKYNFIKNNGYIVLPGAVSPGLCDKISNYYDSVLANGSLQVKPKCEFFDKEGK
CCCCCHHHHHCEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
YSYGEEIGDRDPSQLIGLKMLDLYSHNIDAREAMFSPDIQEVLSLIFGANALAFQQLGII
CCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHCEE
YGTEQDLHQDTAYVRVSEPFLIAASWIALEDITPGSGELELIPGSHNLKDNFFNSSGDEW
ECCCHHHCCCCEEEEECCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHH
CKKVESNPSKSAWWNYKDKDIHDKFIGRLRSLKAQQEPFVFNAKKGDCLIWISHLVHGGS
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHCCCC
PISSRTGSGIPTRKSLVTHYCPFPQAHPIYFHQINNSGPIEYSDNSLYSYKYL
CCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCCEEEEECC
>Mature Secondary Structure
MRLFMRLICYGGPMYYLTANMNRFFRAFRPLGLQRRYKLKKRSVHRILPIENKEFPKTHH
CHHHHHHHHCCCCEEEEECCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DKGLQAKEKYNFIKNNGYIVLPGAVSPGLCDKISNYYDSVLANGSLQVKPKCEFFDKEGK
CCCCCHHHHHCEEECCCEEEECCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCCCCCCCC
YSYGEEIGDRDPSQLIGLKMLDLYSHNIDAREAMFSPDIQEVLSLIFGANALAFQQLGII
CCHHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHCCCHHHHHHHCEE
YGTEQDLHQDTAYVRVSEPFLIAASWIALEDITPGSGELELIPGSHNLKDNFFNSSGDEW
ECCCHHHCCCCEEEEECCCEEEEEEEEEEECCCCCCCCEEEECCCCCCCCCCCCCCHHHH
CKKVESNPSKSAWWNYKDKDIHDKFIGRLRSLKAQQEPFVFNAKKGDCLIWISHLVHGGS
HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEECCCCCEEEEEHHHHCCCC
PISSRTGSGIPTRKSLVTHYCPFPQAHPIYFHQINNSGPIEYSDNSLYSYKYL
CCCCCCCCCCCCHHHHHHHCCCCCCCCCEEEEEECCCCCEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA