| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is cysQ [H]
Identifier: 33863645
GI number: 33863645
Start: 1463341
End: 1464258
Strand: Reverse
Name: cysQ [H]
Synonym: PMT1378
Alternate gene names: 33863645
Gene position: 1464258-1463341 (Counterclockwise)
Preceding gene: 33863648
Following gene: 33863631
Centisome position: 60.74
GC content: 55.99
Gene sequence:
>918_bases ATGATGCCGAACGCACCTGTTCTGCCTGATGGTGTGAACCTGGAGATTTTGTTGCAGCACTTGAGGCGATTGAGCTGGGG TGCTGCAGACATCCTGCTGGCCTATGCCCGGGGAGAACAGCCACCGCATGGATTTTCTAAGGCTCTGAGTGTTGAGGATG GTGGTGAGGGGCCTGTTTCTGCCGCTGACCTTGCGGTGAATCGCTGGCTTCTGGATGGCTTAGAAGCGAATTTCCCCTTG GCAGATTGGACTCTATTGAGTGAGGAGACAGCAAAGGAGCAACTCACTGCAGGCGAACCCTTAGCGGCGGAATGGTTGTG GATCCTTGATCCCTTGGATGGCACAAAGGATTTCTTGCAGGGCACAGGTGAATACGCCGTGCATCTCGCTTTGGTGCGTG GTCAACGCCCAGTGCTTGGAGTGGTACTCCTGCCAGAAGCCGAGGAGCTTTGGTTCGGTGTGATCGGTTCTGGGGCTTGG TGCGAAGACCGGCGGGGAAAACGTTCGCCGGTGCGTTTTAGTCAGCGCCAGGCTGTTTGTGAGTTGATGCTGGTAGCGAG TCGCAACCACCGCGACAACAGGCTTGAACAGCTGCTAGAGAGTCTTGCTCTTGGTGGTAGCAAGGCTGTGGGCAGTGTGG GTTGCAAGGTGACCACGATTTTGCGCGGAGAAACAGATTTGTATGTCTCTCTTTCAGGCCGTAGTGCTCCAAAAGATTGG GATATGGCGGCTCCAGAGGCGGTGCTGATGGCGGCAGGGGGATGTTTCACTCATGCTGATGGACGCCAGCTTGCTTATAA CAGCGGTGATGTACGTCAGGCTGGATGTTTAATCGCCAGCCATGGGCTCGCCCACGCCCAGCTTTGTGAAGCAGCGGCGC GGGCTATGAAAGAGATCGACCCAGGCTTTCAGGTTTGA
Upstream 100 bases:
>100_bases AGAGATCTCCGAGGTGACCAATGGGCGTGCCAACCACATAGAGCACCCCTGGTGCTGGTTCCTCTCGTTGACTCACAATG TGGCCTGCACGTGTCTATGC
Downstream 100 bases:
>100_bases ATTGACCTGAAGCAGCCGATTAGTTGAGAGGGGCTACAGGAGTTGGAGCTGGCTCTGATTGAGTCTCTTCGCCGTTTTGA GGCACGCCTCTGAGTGTGAG
Product: 3'-phosphoadenosine-5'-phosphosulfate (PAPS) 3'-phosphatase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 305; Mature: 305
Protein sequence:
>305_residues MMPNAPVLPDGVNLEILLQHLRRLSWGAADILLAYARGEQPPHGFSKALSVEDGGEGPVSAADLAVNRWLLDGLEANFPL ADWTLLSEETAKEQLTAGEPLAAEWLWILDPLDGTKDFLQGTGEYAVHLALVRGQRPVLGVVLLPEAEELWFGVIGSGAW CEDRRGKRSPVRFSQRQAVCELMLVASRNHRDNRLEQLLESLALGGSKAVGSVGCKVTTILRGETDLYVSLSGRSAPKDW DMAAPEAVLMAAGGCFTHADGRQLAYNSGDVRQAGCLIASHGLAHAQLCEAAARAMKEIDPGFQV
Sequences:
>Translated_305_residues MMPNAPVLPDGVNLEILLQHLRRLSWGAADILLAYARGEQPPHGFSKALSVEDGGEGPVSAADLAVNRWLLDGLEANFPL ADWTLLSEETAKEQLTAGEPLAAEWLWILDPLDGTKDFLQGTGEYAVHLALVRGQRPVLGVVLLPEAEELWFGVIGSGAW CEDRRGKRSPVRFSQRQAVCELMLVASRNHRDNRLEQLLESLALGGSKAVGSVGCKVTTILRGETDLYVSLSGRSAPKDW DMAAPEAVLMAAGGCFTHADGRQLAYNSGDVRQAGCLIASHGLAHAQLCEAAARAMKEIDPGFQV >Mature_305_residues MMPNAPVLPDGVNLEILLQHLRRLSWGAADILLAYARGEQPPHGFSKALSVEDGGEGPVSAADLAVNRWLLDGLEANFPL ADWTLLSEETAKEQLTAGEPLAAEWLWILDPLDGTKDFLQGTGEYAVHLALVRGQRPVLGVVLLPEAEELWFGVIGSGAW CEDRRGKRSPVRFSQRQAVCELMLVASRNHRDNRLEQLLESLALGGSKAVGSVGCKVTTILRGETDLYVSLSGRSAPKDW DMAAPEAVLMAAGGCFTHADGRQLAYNSGDVRQAGCLIASHGLAHAQLCEAAARAMKEIDPGFQV
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Escherichia coli, GI1790659, Length=214, Percent_Identity=31.7757009345794, Blast_Score=87, Evalue=1e-18, Organism=Caenorhabditis elegans, GI193202572, Length=231, Percent_Identity=25.974025974026, Blast_Score=68, Evalue=6e-12, Organism=Caenorhabditis elegans, GI71995897, Length=250, Percent_Identity=28, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71995905, Length=250, Percent_Identity=28, Blast_Score=67, Evalue=1e-11, Organism=Caenorhabditis elegans, GI193202570, Length=233, Percent_Identity=25.7510729613734, Blast_Score=66, Evalue=3e-11, Organism=Drosophila melanogaster, GI24651149, Length=267, Percent_Identity=29.2134831460674, Blast_Score=79, Evalue=3e-15, Organism=Drosophila melanogaster, GI24664922, Length=225, Percent_Identity=28, Blast_Score=77, Evalue=1e-14, Organism=Drosophila melanogaster, GI24664926, Length=224, Percent_Identity=26.7857142857143, Blast_Score=75, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 32811; Mature: 32811
Theoretical pI: Translated: 4.84; Mature: 4.84
Prosite motif: PS00630 IMP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMPNAPVLPDGVNLEILLQHLRRLSWGAADILLAYARGEQPPHGFSKALSVEDGGEGPVS CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCCH AADLAVNRWLLDGLEANFPLADWTLLSEETAKEQLTAGEPLAAEWLWILDPLDGTKDFLQ HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH GTGEYAVHLALVRGQRPVLGVVLLPEAEELWFGVIGSGAWCEDRRGKRSPVRFSQRQAVC CCCCCEEEEEEECCCCCEEEEEECCCHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHH ELMLVASRNHRDNRLEQLLESLALGGSKAVGSVGCKVTTILRGETDLYVSLSGRSAPKDW HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCC DMAAPEAVLMAAGGCFTHADGRQLAYNSGDVRQAGCLIASHGLAHAQLCEAAARAMKEID CCCCCCEEEEECCCCEECCCCCEEEECCCCCHHHCEEEHHCCCHHHHHHHHHHHHHHHCC PGFQV CCCCC >Mature Secondary Structure MMPNAPVLPDGVNLEILLQHLRRLSWGAADILLAYARGEQPPHGFSKALSVEDGGEGPVS CCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCHHHEECCCCCCCCCCH AADLAVNRWLLDGLEANFPLADWTLLSEETAKEQLTAGEPLAAEWLWILDPLDGTKDFLQ HHHHHHHHHHHHCCCCCCCCCCEEEHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHH GTGEYAVHLALVRGQRPVLGVVLLPEAEELWFGVIGSGAWCEDRRGKRSPVRFSQRQAVC CCCCCEEEEEEECCCCCEEEEEECCCHHHHEEEECCCCCCCCCCCCCCCCCCHHHHHHHH ELMLVASRNHRDNRLEQLLESLALGGSKAVGSVGCKVTTILRGETDLYVSLSGRSAPKDW HHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEECCCEEEEEECCCCCCCCC DMAAPEAVLMAAGGCFTHADGRQLAYNSGDVRQAGCLIASHGLAHAQLCEAAARAMKEID CCCCCCEEEEECCCCEECCCCCEEEECCCCCHHHCEEEHHCCCHHHHHHHHHHHHHHHCC PGFQV CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]