| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is yloA [H]
Identifier: 33863586
GI number: 33863586
Start: 1403994
End: 1405838
Strand: Direct
Name: yloA [H]
Synonym: PMT1319
Alternate gene names: 33863586
Gene position: 1403994-1405838 (Clockwise)
Preceding gene: 33863585
Following gene: 33863587
Centisome position: 58.24
GC content: 55.77
Gene sequence:
>1845_bases TTGCCAACGCCACTGGGCCCAGTAATCACCGTGAGCTTTCCTTCAGCGGCGGATGAAGCCATTGATTGCATTGAATCGGA TCGCAGAGTAGGAAGGCTGCGTGCAATCCAGGTCCCGACTGAATCGATGGCCCATGCTGCCCTCCAGGTCATGGACCTCT CAAGCTTGCGCGCTGTACTGAGCGAGCTCCGCAAGGAGGTGCTGCCAAGCCGCTTCGAAAAGGTCCAACAACCAGAACCT CATACCCTCCAACTGGGGCTGCGCACACTCAAAGGTCTTGTGTGGCTGGAACTCAGTTGGCGTGCTGATTGTCCCCGACT GGTCAAGATCACCCCTCCTCCCCGCCTAGGCAGCGGCAGCACTTTGGCCCAGCAGATTCAACATGGCCTTCGACAGATGG CCCTCATTGAACTGAAACAGAAAGGATTTGATCGCGTGGTGGAGTGCGGCCTCGCCCACCGCCCCGGCGAACCTATCGAG CGCACTCTTGTGCTGGAACTGATGGGACGCCACAGCAACCTGCTTCTGCTTGATCGTCAACGCCAGGTGATCACCCTTGG ACGCCAGGTACGCAACCATCAATCAAGAGTGAGACCAATCGGAACTGCAGACATCTATGTAGCTCCACCACCGATGCAAG GCAGAGAACCAAGCTCAAAGGAATCCCTAAAACGCTGGAAAGACATTCTCTGCCTTGTGCCAACCAAGCTACGTAGCGCT CTGCAGCAGTGTTACCAAGGCATCAGTCCTGCACTAGCTTTGCAGCTGGTTGACGACGATGCAAAAAAAGCACATGCCCT GCTGGAGGTTTCAGTACTTGAGATCACCGACGAGCAATGGCAACACCTTTACCACCGCTGGAGTCGATGGCTGGACTGTC TTGAGAAAGAGCGCTTCACGATGAGGTTTGACGGTCCAAGCAGCTACCGCGTCTGGGACTGTGACACCTCAACCTCCTCC TCCTTCACCGATGGGCTCAGCCTCACTCTCGGGAGTTATTACCGAAGGCATCTTGAAACCCAATCTCTCAATCAACTAGC CGAAGACCTCCAGAAAAGACTTTTTCAGTGGCGACAACGAGAGGAGCAGGCCCTTGGCGAACAACAGGGTCGACTCAACG AAACCAGTCAAAGCAATTCTCTTCAACAACAAGCCGACGCCATGCTTTGCCTGCCTTCGCCGAGCAAGGATCTGATCAAC CAAACCCAAAAGCTCTACCGAAAAGCTCAAAAATTCCGCCGCTCAGTGCCCGTGCTGAAAACACGGATTGAACATCACCA GCAAAGGCTGCAGCTGATCCAAGGCAGTGAAATGTTTCTGGAAGATCTGCTTGGAACCAGCTGGGAAGGACAGCGAGAAC GGTCGATAAGGCTGCAGGAGTTGCGGCAGGAGCTGGACGAGTTGCTGATCTCTCAATCCCGCAATCGCCAGAAGCGAGGC CGTCGCAATCAACAACCCCCAAGCCCCCTCGAACTGACCACTCCTGGTGGACTCATCGTTCAGGTTGGTCGCAACCACCG CCAAAACGATTGGATCAGCCTTCGCCAAGCTCGCCCTGGTGATCTTTGGTTTCATGCCCAGGAATGTCCAGGCAGCCATG TCGTTCTCAAGGCCTCCAATGGCCATGCTGAGGAGGCCGACCTGCAACTAGCTGCAGACCTGGCCGCTCACTTCAGTCGT GCTAGAGGCAATCAACGCGTACCCGTGGTGATGGTGCCCACAAGCAACCTGCAGCGAATCCCAGGAGCAGGCCCAGGGAC CGTGCGATACCGGGACGGAAACCTTTGCTGGGCTGAACCAGACCGAGGGCTTCAACACCTCTCTGCCTCAGAACTCTTAG TCTGA
Upstream 100 bases:
>100_bases ATCGCCCTCAATCTCGCCTTGCCTGGCTTCACGCGTTGTCGCCGAAATAGACAGCCAGATCTCTGGATGGAGCTCTAGGA GTTGCTTCACTAACGAACCC
Downstream 100 bases:
>100_bases TGAAAACCAAGCGGCGCCTGTTCTGACCAGTCCCGATCAGCCCACAGGTTCGGTTCTTCCACCCCCTACCCCGATTCACG TCGAGCAGGGAATCAAGCAC
Product: secreted protein MPB70 precursor
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 614; Mature: 613
Protein sequence:
>614_residues MPTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVLSELRKEVLPSRFEKVQQPEP HTLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGSTLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIE RTLVLELMGRHSNLLLLDRQRQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSA LQQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFTMRFDGPSSYRVWDCDTSTSS SFTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQREEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLIN QTQKLYRKAQKFRRSVPVLKTRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRG RRNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASNGHAEEADLQLAADLAAHFSR ARGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEPDRGLQHLSASELLV
Sequences:
>Translated_614_residues MPTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVLSELRKEVLPSRFEKVQQPEP HTLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGSTLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIE RTLVLELMGRHSNLLLLDRQRQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSA LQQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFTMRFDGPSSYRVWDCDTSTSS SFTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQREEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLIN QTQKLYRKAQKFRRSVPVLKTRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRG RRNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASNGHAEEADLQLAADLAAHFSR ARGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEPDRGLQHLSASELLV >Mature_613_residues PTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVLSELRKEVLPSRFEKVQQPEPH TLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGSTLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIER TLVLELMGRHSNLLLLDRQRQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSAL QQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFTMRFDGPSSYRVWDCDTSTSSS FTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQREEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLINQ TQKLYRKAQKFRRSVPVLKTRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRGR RNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASNGHAEEADLQLAADLAAHFSRA RGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEPDRGLQHLSASELLV
Specific function: Unknown
COG id: COG1293
COG function: function code K; Predicted RNA-binding protein homologous to eukaryotic snRNP
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the SDCCAG1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008532 - InterPro: IPR008616 [H]
Pfam domain/function: PF05670 DUF814; PF05833 FbpA [H]
EC number: NA
Molecular weight: Translated: 69894; Mature: 69763
Theoretical pI: Translated: 9.55; Mature: 9.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVL CCCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHH SELRKEVLPSRFEKVQQPEPHTLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCCCCCCH TLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIERTLVLELMGRHSNLLLLDRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC RQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSA HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH LQQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFT HHHHHHCCCHHHEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEE MRFDGPSSYRVWDCDTSTSSSFTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQR EEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLINQTQKLYRKAQKFRRSVPVLK HHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHH TRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRG HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHC RRNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASN CCCCCCCCCEEEECCCCEEEEECCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEEECCC GHAEEADLQLAADLAAHFSRARGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEP CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCEEECCC DRGLQHLSASELLV CHHHHHCCHHHCCC >Mature Secondary Structure PTPLGPVITVSFPSAADEAIDCIESDRRVGRLRAIQVPTESMAHAALQVMDLSSLRAVL CCCCCCEEEEECCCHHHHHHHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHHHHHHH SELRKEVLPSRFEKVQQPEPHTLQLGLRTLKGLVWLELSWRADCPRLVKITPPPRLGSGS HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCEEEEEEECCCCCCCEEEECCCCCCCCCH TLAQQIQHGLRQMALIELKQKGFDRVVECGLAHRPGEPIERTLVLELMGRHSNLLLLDRQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCCCEEEEECC RQVITLGRQVRNHQSRVRPIGTADIYVAPPPMQGREPSSKESLKRWKDILCLVPTKLRSA HHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHH LQQCYQGISPALALQLVDDDAKKAHALLEVSVLEITDEQWQHLYHRWSRWLDCLEKERFT HHHHHHCCCHHHEEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCEE MRFDGPSSYRVWDCDTSTSSSFTDGLSLTLGSYYRRHLETQSLNQLAEDLQKRLFQWRQR EEECCCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EEQALGEQQGRLNETSQSNSLQQQADAMLCLPSPSKDLINQTQKLYRKAQKFRRSVPVLK HHHHHHHHHCCCCCCHHHHHHHHHCCCEEECCCCCHHHHHHHHHHHHHHHHHHHCCHHHH TRIEHHQQRLQLIQGSEMFLEDLLGTSWEGQRERSIRLQELRQELDELLISQSRNRQKRG HHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHC RRNQQPPSPLELTTPGGLIVQVGRNHRQNDWISLRQARPGDLWFHAQECPGSHVVLKASN CCCCCCCCCEEEECCCCEEEEECCCCCCCCCEECCCCCCCCEEEEECCCCCCEEEEECCC GHAEEADLQLAADLAAHFSRARGNQRVPVVMVPTSNLQRIPGAGPGTVRYRDGNLCWAEP CCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCEEECCC DRGLQHLSASELLV CHHHHHCCHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9384377; 9534248 [H]