| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is gltX [H]
Identifier: 33863576
GI number: 33863576
Start: 1395402
End: 1396832
Strand: Direct
Name: gltX [H]
Synonym: PMT1308
Alternate gene names: 33863576
Gene position: 1395402-1396832 (Clockwise)
Preceding gene: 33863575
Following gene: 33863581
Centisome position: 57.88
GC content: 54.09
Gene sequence:
>1431_bases GTGAAGGTGCGCGTTCGGCTGGCCCCGAGTCCAACAGGCACACTTCACATCGGCACGGCAAGAACGGCAGTTTTCAACTG GCTCTTTGCACGCCATCAGGGAGGACAATTCCTCTTGCGCATCGAGGACACCGACAAAGAACGATCCAAGCCAGAATTCA CCACCAACATCCTCGAAGGTCTGAAGTGGCTTGGCCTCAACTGGGATGAACAGCCCATCATTCAAAGCCAGCATGTGGAT GACCATCGCGCAGCAATCCAAAAGCTGCTCGATCGTGACCTGGCCTACCGCTGCTACGCCAGCGAGACTGAACTGGAGGC CATGCGAGAAACACAAAAGGCCCAGGGCAAGGCCCCTCGCTACGACAACCGTCACCGAGATCTCAATCCCGAGCAAGAAG CCGCCTTCCAATCTGAAGGTAGAACTGCCGTGGTGCGCTTCCGTATCGATGATGATGCGACCATCAGTTGGAAGGACCTG GTGCGCGGTCCAATGCACTGGAAGGGATCAGATTTGGGCGGCGACATGGTGATCTCACGTCGGGCTCCAGCCAAGGAAAT TGGAGACCCGCTCTACAACCTTGTTGTGGTGGTTGATGACGCCGCCATGAGTATCTCGCATGTGATCCGCGGCGAAGATC ACATCGCAAACACGGCCAAACAACTGCTGATCTATGAGGCCCTTGGATTACCAATACCTCAATTCGCCCATACCCCGCTC ATTCTCAATTCCGAAGGACGCAAACTCTCCAAGCGGGATGGAGTGACCTCGATCAGTGACTTCCAAGCCATGGGGTACAC AGCCGAAGCTATGGCCAACTACATGTCCCTGCTGGGTTGGTCAGTCCCCGAAGGGACTGACGAACGGTTCACTCTTCAGC AAGCTGCAACCGTCTTCAGTTTTGACCGAGTCAATAAAGCAGGAGCAAAGTTTGACTGGGACAAACTCAACTGGCTCAAC TCTCAAGTGCTACATGACTTGCCTAAAGATCAACTGTTGCATGAACTCAAACCCTTGTGGTCTAAGGCTGGCTGGGCTCT ACCAGAAGAAAACTGGTGTTTGGATCTAGCCGAGCTGCTTGGACCATCGCTGACACTGCTCAAGGATGGTGTCGATCAAG CTCGCCCTTTTTTCGAAGAACCAACGCTGCAAGCTGATGGCCTGGAACAACTTGCCGTGGACGGAGCCAAGGCAGGCCTT AGCAATCTTCTCGATCAGCTGGATCGCACTTCCTGGGACGGTTTTGATGTCAAGCAAGCACAACAACTGCTAACGAATGC TGCTCAGGCTGCCAACGTCAAAAAAGGTGTGATCATGAAAAGCCTCAGAGCTGCGCTTCTAGGCCGCCTACAAGGGCCAG ACCTAATCACAACATGGGGATTACTGGCCAGGATCGGGCAAGACTTGAACAGGCTGCGTCGTTGTCTCTGA
Upstream 100 bases:
>100_bases GGACCGTAGTTCAATTGGTTAGAGCACCGCCCTGTCACGGCGGAAGTTGCGGGTTCGAACCCCGTCGGTCCCGTTCTTAT TCCTAATCCTGAGAGTCATT
Downstream 100 bases:
>100_bases GCAGTCGTCTTCGTTTGAATCTTCAGGAGCGATTAAACCCAGGGCCTTGGCCAGCGGCTGGGCCGTGAGGCCTTGAATGC CAACTGTCATCAGGATGGTG
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS [H]
Number of amino acids: Translated: 476; Mature: 476
Protein sequence:
>476_residues MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGQFLLRIEDTDKERSKPEFTTNILEGLKWLGLNWDEQPIIQSQHVD DHRAAIQKLLDRDLAYRCYASETELEAMRETQKAQGKAPRYDNRHRDLNPEQEAAFQSEGRTAVVRFRIDDDATISWKDL VRGPMHWKGSDLGGDMVISRRAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMSLLGWSVPEGTDERFTLQQAATVFSFDRVNKAGAKFDWDKLNWLN SQVLHDLPKDQLLHELKPLWSKAGWALPEENWCLDLAELLGPSLTLLKDGVDQARPFFEEPTLQADGLEQLAVDGAKAGL SNLLDQLDRTSWDGFDVKQAQQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL
Sequences:
>Translated_476_residues MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGQFLLRIEDTDKERSKPEFTTNILEGLKWLGLNWDEQPIIQSQHVD DHRAAIQKLLDRDLAYRCYASETELEAMRETQKAQGKAPRYDNRHRDLNPEQEAAFQSEGRTAVVRFRIDDDATISWKDL VRGPMHWKGSDLGGDMVISRRAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMSLLGWSVPEGTDERFTLQQAATVFSFDRVNKAGAKFDWDKLNWLN SQVLHDLPKDQLLHELKPLWSKAGWALPEENWCLDLAELLGPSLTLLKDGVDQARPFFEEPTLQADGLEQLAVDGAKAGL SNLLDQLDRTSWDGFDVKQAQQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL >Mature_476_residues MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGQFLLRIEDTDKERSKPEFTTNILEGLKWLGLNWDEQPIIQSQHVD DHRAAIQKLLDRDLAYRCYASETELEAMRETQKAQGKAPRYDNRHRDLNPEQEAAFQSEGRTAVVRFRIDDDATISWKDL VRGPMHWKGSDLGGDMVISRRAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMSLLGWSVPEGTDERFTLQQAATVFSFDRVNKAGAKFDWDKLNWLN SQVLHDLPKDQLLHELKPLWSKAGWALPEENWCLDLAELLGPSLTLLKDGVDQARPFFEEPTLQADGLEQLAVDGAKAGL SNLLDQLDRTSWDGFDVKQAQQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu) [H]
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family [H]
Homologues:
Organism=Homo sapiens, GI134288884, Length=476, Percent_Identity=34.0336134453782, Blast_Score=215, Evalue=6e-56, Organism=Homo sapiens, GI62241042, Length=344, Percent_Identity=22.6744186046512, Blast_Score=74, Evalue=3e-13, Organism=Escherichia coli, GI1788743, Length=485, Percent_Identity=37.9381443298969, Blast_Score=318, Evalue=6e-88, Organism=Escherichia coli, GI226510925, Length=275, Percent_Identity=32.7272727272727, Blast_Score=128, Evalue=8e-31, Organism=Escherichia coli, GI1786895, Length=318, Percent_Identity=22.9559748427673, Blast_Score=75, Evalue=8e-15, Organism=Caenorhabditis elegans, GI71993394, Length=299, Percent_Identity=36.7892976588629, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17511007, Length=365, Percent_Identity=24.1095890410959, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6324540, Length=494, Percent_Identity=30.9716599190283, Blast_Score=221, Evalue=2e-58, Organism=Saccharomyces cerevisiae, GI6321192, Length=233, Percent_Identity=26.6094420600858, Blast_Score=75, Evalue=3e-14, Organism=Saccharomyces cerevisiae, GI6324742, Length=133, Percent_Identity=30.8270676691729, Blast_Score=74, Evalue=7e-14, Organism=Drosophila melanogaster, GI24665321, Length=503, Percent_Identity=33.9960238568588, Blast_Score=244, Evalue=8e-65,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 [H]
Pfam domain/function: PF00749 tRNA-synt_1c [H]
EC number: =6.1.1.17 [H]
Molecular weight: Translated: 53387; Mature: 53387
Theoretical pI: Translated: 6.31; Mature: 6.31
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGQFLLRIEDTDKERSKPEFTTNILEG CEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHH LKWLGLNWDEQPIIQSQHVDDHRAAIQKLLDRDLAYRCYASETELEAMRETQKAQGKAPR HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC YDNRHRDLNPEQEAAFQSEGRTAVVRFRIDDDATISWKDLVRGPMHWKGSDLGGDMVISR CCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHCCCCCCCCCCCCCCEEEEC RAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL CCCHHHHCCHHEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMSLLGWSVPEGTDERFTLQQAATVFS EECCCCCCCHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH FDRVNKAGAKFDWDKLNWLNSQVLHDLPKDQLLHELKPLWSKAGWALPEENWCLDLAELL HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC GPSLTLLKDGVDQARPFFEEPTLQADGLEQLAVDGAKAGLSNLLDQLDRTSWDGFDVKQA CCCHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH QQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKVRVRLAPSPTGTLHIGTARTAVFNWLFARHQGGQFLLRIEDTDKERSKPEFTTNILEG CEEEEEECCCCCCEEEECHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHHHHHHH LKWLGLNWDEQPIIQSQHVDDHRAAIQKLLDRDLAYRCYASETELEAMRETQKAQGKAPR HHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCC YDNRHRDLNPEQEAAFQSEGRTAVVRFRIDDDATISWKDLVRGPMHWKGSDLGGDMVISR CCCCCCCCCCHHHHHHHCCCCEEEEEEEECCCCEEEHHHHHCCCCCCCCCCCCCCEEEEC RAPAKEIGDPLYNLVVVVDDAAMSISHVIRGEDHIANTAKQLLIYEALGLPIPQFAHTPL CCCHHHHCCHHEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCE ILNSEGRKLSKRDGVTSISDFQAMGYTAEAMANYMSLLGWSVPEGTDERFTLQQAATVFS EECCCCCCCHHHCCCCCHHHHHHHCCCHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHH FDRVNKAGAKFDWDKLNWLNSQVLHDLPKDQLLHELKPLWSKAGWALPEENWCLDLAELL HHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHC GPSLTLLKDGVDQARPFFEEPTLQADGLEQLAVDGAKAGLSNLLDQLDRTSWDGFDVKQA CCCHHHHHCCHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHH QQLLTNAAQAANVKKGVIMKSLRAALLGRLQGPDLITTWGLLARIGQDLNRLRRCL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA