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The map label for this gene is yjbQ [C]

Identifier: 33863549

GI number: 33863549

Start: 1368268

End: 1368966

Strand: Direct

Name: yjbQ [C]

Synonym: PMT1281

Alternate gene names: 33863549

Gene position: 1368268-1368966 (Clockwise)

Preceding gene: 33863545

Following gene: 33863550

Centisome position: 56.75

GC content: 55.94

Gene sequence:

>699_bases
GTGGCGAGTGTTGTCTTTGCCAGCACAAGGTTTCGAGACAAGCCATCGGGTAGATATTTTTCAGCTGCTTCAGACCCGCT
GCGCATGGAGAGAGGCAGAGCCACTCGCAATCGCAGCAAGCAAAGCAATGATCGCCAGCAGACCCTTTCAGCGAAACAGC
ACGCCCCATTGCTGCTAGGTCAACTGTGTAGACCAAACTTAGGCAGCCAGTCACTCCCCCCAACAGCGATGTCTCTTCAG
CAAGCGTTACACCAGCTGGAGATCGTCACGACAGGAGAAGGCTTCACAGACCTCACTGCCCAACTCAATCATTGGATTGC
CTCCTCGAGAATTAAGCGTGGCGTTCTCCACCTCACGGCATTGCACACCAGCTGCAGCCTCACCATCAACGAAAACGCAG
ACCCACGAGTGCTCACAGATCTCTCGGCTTATCTCAAGGCTCTCGTGCCAGAAGAGGGCTTCCGGCCGATCAACGACCTA
GGCGCGCGGCGTTCCTATCTCCATGACGATGAAGGGCCAGACGATATGCCCGCGCATATCCGCACAGCTCTCACCTGCAG
CACTCTTAGCCTCAGCATTGATCAAGGCAGGCTGCTACTAGGCATCTGGCAGGCGATTTATCTCTGGGAACATCGCCGGC
ATGGAAGCCACAGGCGGGTGGCGATCCACGCGATTGGCGAAATGAACAGCCATGAATGA

Upstream 100 bases:

>100_bases
TGTTCCAGGTGCATTCCTTGCGGCATCAGTCATCAGTCAACGTCATCCAACCACAAGGGAATTCCTCACCATTGCTGGCC
ATCAAGGCATAGGTCATCCA

Downstream 100 bases:

>100_bases
TCTGCCTGATGAATTGTTAAAGCAACTTGATCGTTATGCCGCGATGCACGGCATGGATCAAAAACAAGCCATCGAGCATC
TACTACGAGGTGCCCTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 232; Mature: 231

Protein sequence:

>232_residues
MASVVFASTRFRDKPSGRYFSAASDPLRMERGRATRNRSKQSNDRQQTLSAKQHAPLLLGQLCRPNLGSQSLPPTAMSLQ
QALHQLEIVTTGEGFTDLTAQLNHWIASSRIKRGVLHLTALHTSCSLTINENADPRVLTDLSAYLKALVPEEGFRPINDL
GARRSYLHDDEGPDDMPAHIRTALTCSTLSLSIDQGRLLLGIWQAIYLWEHRRHGSHRRVAIHAIGEMNSHE

Sequences:

>Translated_232_residues
MASVVFASTRFRDKPSGRYFSAASDPLRMERGRATRNRSKQSNDRQQTLSAKQHAPLLLGQLCRPNLGSQSLPPTAMSLQ
QALHQLEIVTTGEGFTDLTAQLNHWIASSRIKRGVLHLTALHTSCSLTINENADPRVLTDLSAYLKALVPEEGFRPINDL
GARRSYLHDDEGPDDMPAHIRTALTCSTLSLSIDQGRLLLGIWQAIYLWEHRRHGSHRRVAIHAIGEMNSHE
>Mature_231_residues
ASVVFASTRFRDKPSGRYFSAASDPLRMERGRATRNRSKQSNDRQQTLSAKQHAPLLLGQLCRPNLGSQSLPPTAMSLQQ
ALHQLEIVTTGEGFTDLTAQLNHWIASSRIKRGVLHLTALHTSCSLTINENADPRVLTDLSAYLKALVPEEGFRPINDLG
ARRSYLHDDEGPDDMPAHIRTALTCSTLSLSIDQGRLLLGIWQAIYLWEHRRHGSHRRVAIHAIGEMNSHE

Specific function: Unknown

COG id: COG0432

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0047 family [H]

Homologues:

Organism=Escherichia coli, GI1790491, Length=135, Percent_Identity=40.7407407407407, Blast_Score=99, Evalue=2e-22,
Organism=Drosophila melanogaster, GI221476594, Length=113, Percent_Identity=40.7079646017699, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI221476589, Length=113, Percent_Identity=40.7079646017699, Blast_Score=89, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001602 [H]

Pfam domain/function: PF01894 UPF0047 [H]

EC number: NA

Molecular weight: Translated: 25902; Mature: 25771

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVVFASTRFRDKPSGRYFSAASDPLRMERGRATRNRSKQSNDRQQTLSAKQHAPLLLG
CCCEEEECCCCCCCCCCCEECCCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHCCHHHHH
QLCRPNLGSQSLPPTAMSLQQALHQLEIVTTGEGFTDLTAQLNHWIASSRIKRGVLHLTA
HHHCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
LHTSCSLTINENADPRVLTDLSAYLKALVPEEGFRPINDLGARRSYLHDDEGPDDMPAHI
ECCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
RTALTCSTLSLSIDQGRLLLGIWQAIYLWEHRRHGSHRRVAIHAIGEMNSHE
HHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure 
ASVVFASTRFRDKPSGRYFSAASDPLRMERGRATRNRSKQSNDRQQTLSAKQHAPLLLG
CCEEEECCCCCCCCCCCEECCCCCCHHHHHCCHHHHCCCCCHHHHHHHHHHHCCHHHHH
QLCRPNLGSQSLPPTAMSLQQALHQLEIVTTGEGFTDLTAQLNHWIASSRIKRGVLHLTA
HHHCCCCCCCCCCHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHEEE
LHTSCSLTINENADPRVLTDLSAYLKALVPEEGFRPINDLGARRSYLHDDEGPDDMPAHI
ECCEEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCCCCCCCCHHHH
RTALTCSTLSLSIDQGRLLLGIWQAIYLWEHRRHGSHRRVAIHAIGEMNSHE
HHHHHHHEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]