| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863491
Identifier: 33863491
GI number: 33863491
Start: 1309502
End: 1310650
Strand: Direct
Name: 33863491
Synonym: PMT1223
Alternate gene names: NA
Gene position: 1309502-1310650 (Clockwise)
Preceding gene: 33863486
Following gene: 33863492
Centisome position: 54.32
GC content: 42.3
Gene sequence:
>1149_bases ATGACATTTGAATTAGAGAATAAAGTGCCAAGCATCCACCCAAAAGCAACGAATTGGCTTGACAATAATAATAGCAATTT TAATTTCAACCTTACCAAGGCCTCATCTCTAGTTAACAGTGGATGGGGGAAAAACTACGGCAACCAATTGCTAGACTCTA ATCTATTAGATCCTATCAAGAATCCAAAGATCAAGTCATCTGATTTGATTGACATCGGCAATATTCGCATTCCAGAAATC AACTTGACTCAGCCACTGGAAATCGAAAACGATCTCATCCAACCTATTAATCCTGATGCTGCCGTTTCAACCGATATCGC GGATAGGCTCATTAACAATAGGGATGCAAGGATGGAAAATCTATGGTCTACCATTCGTGGAGGAATGTCTGGACACAACA ATGAACATGACGACATACATGTACATGTTGGACAAGAAACTACTATTTGGCACGATGGTGGCAGTCTATTTACAATAACC ACTGAAGGGGAAGATACATACACAACCGAGACAGATCCCAATGGTGAAAACACTTATTGGAGGAATGGGGAAGAGATTAG CGAAGAAGATCATGCATACGGTGATCCCACTGAAGGACAAATTGAAGGGGCAAGAAGCAATCTTGGAAGTCATGCAGGTG GAGAGGATGAAGGCGAAGGGGGCTGGTGGGATAGTTTTTGGGATTGGGTGACGGGTAATAACATCACGCCTTATCCAGGA CTGGAGGACCCCGGCAGAACACCATGGTGGACTACCGCAAATGCCTACAACCTTGATTCACTGATTAACCAAGTTGATCC TCATTTAGCTTCTGAATATCTACTTGAAGAGGTTGTAACAACTTCATTAGAGAATAGAATTGTAGACAATTTATTATTGC AAGGCAACAACACCTCTGCCCAGATTGAAGGCACTGACGAACTGACAAACTTCGACAAAGGATTGCTCGCAAATAAAGTT ACCACTAACTTTGAGCATGCCCAAGATTTTGGAGAACCGATCGCCGCTGATCATGATGTCTTCAGCTTTGGTGGAATCAC ACAAAGCATGCCTTTATCGTCTTCAGATGAGAACGTTCTTTTAACTGTAGACAATGTCATGCCTCAACAAATGTTGAGCA ACAATATGACAACGCCTATCGAGTTCTAA
Upstream 100 bases:
>100_bases AACTCATCAACCCTTTAAAATAATGATTAACAACAACCTCGTTCGCAATCAAGTCAAAGCTAATTGGGAAGACATAACAA GGAAGCGCGAGGATCATGCA
Downstream 100 bases:
>100_bases TCCAATCAGAAGAGCAGAAAAACTAAAGCTCAGCACTGCAAGCCAAGTGAGAGCATCTACAGGTAAATCATGAGTCAATA ATAGAGCGGCCACCACTTAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 382; Mature: 381
Protein sequence:
>382_residues MTFELENKVPSIHPKATNWLDNNNSNFNFNLTKASSLVNSGWGKNYGNQLLDSNLLDPIKNPKIKSSDLIDIGNIRIPEI NLTQPLEIENDLIQPINPDAAVSTDIADRLINNRDARMENLWSTIRGGMSGHNNEHDDIHVHVGQETTIWHDGGSLFTIT TEGEDTYTTETDPNGENTYWRNGEEISEEDHAYGDPTEGQIEGARSNLGSHAGGEDEGEGGWWDSFWDWVTGNNITPYPG LEDPGRTPWWTTANAYNLDSLINQVDPHLASEYLLEEVVTTSLENRIVDNLLLQGNNTSAQIEGTDELTNFDKGLLANKV TTNFEHAQDFGEPIAADHDVFSFGGITQSMPLSSSDENVLLTVDNVMPQQMLSNNMTTPIEF
Sequences:
>Translated_382_residues MTFELENKVPSIHPKATNWLDNNNSNFNFNLTKASSLVNSGWGKNYGNQLLDSNLLDPIKNPKIKSSDLIDIGNIRIPEI NLTQPLEIENDLIQPINPDAAVSTDIADRLINNRDARMENLWSTIRGGMSGHNNEHDDIHVHVGQETTIWHDGGSLFTIT TEGEDTYTTETDPNGENTYWRNGEEISEEDHAYGDPTEGQIEGARSNLGSHAGGEDEGEGGWWDSFWDWVTGNNITPYPG LEDPGRTPWWTTANAYNLDSLINQVDPHLASEYLLEEVVTTSLENRIVDNLLLQGNNTSAQIEGTDELTNFDKGLLANKV TTNFEHAQDFGEPIAADHDVFSFGGITQSMPLSSSDENVLLTVDNVMPQQMLSNNMTTPIEF >Mature_381_residues TFELENKVPSIHPKATNWLDNNNSNFNFNLTKASSLVNSGWGKNYGNQLLDSNLLDPIKNPKIKSSDLIDIGNIRIPEIN LTQPLEIENDLIQPINPDAAVSTDIADRLINNRDARMENLWSTIRGGMSGHNNEHDDIHVHVGQETTIWHDGGSLFTITT EGEDTYTTETDPNGENTYWRNGEEISEEDHAYGDPTEGQIEGARSNLGSHAGGEDEGEGGWWDSFWDWVTGNNITPYPGL EDPGRTPWWTTANAYNLDSLINQVDPHLASEYLLEEVVTTSLENRIVDNLLLQGNNTSAQIEGTDELTNFDKGLLANKVT TNFEHAQDFGEPIAADHDVFSFGGITQSMPLSSSDENVLLTVDNVMPQQMLSNNMTTPIEF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 42429; Mature: 42298
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFELENKVPSIHPKATNWLDNNNSNFNFNLTKASSLVNSGWGKNYGNQLLDSNLLDPIK CCEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCC NPKIKSSDLIDIGNIRIPEINLTQPLEIENDLIQPINPDAAVSTDIADRLINNRDARMEN CCCCCCCCCEEECCEECCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCHHHHH LWSTIRGGMSGHNNEHDDIHVHVGQETTIWHDGGSLFTITTEGEDTYTTETDPNGENTYW HHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCC RNGEEISEEDHAYGDPTEGQIEGARSNLGSHAGGEDEGEGGWWDSFWDWVTGNNITPYPG CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC LEDPGRTPWWTTANAYNLDSLINQVDPHLASEYLLEEVVTTSLENRIVDNLLLQGNNTSA CCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCE QIEGTDELTNFDKGLLANKVTTNFEHAQDFGEPIAADHDVFSFGGITQSMPLSSSDENVL EEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEE LTVDNVMPQQMLSNNMTTPIEF EEECCCCHHHHHHCCCCCCCCC >Mature Secondary Structure TFELENKVPSIHPKATNWLDNNNSNFNFNLTKASSLVNSGWGKNYGNQLLDSNLLDPIK CEECCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHCCCCCCHHHHHHHHHHCCCCC NPKIKSSDLIDIGNIRIPEINLTQPLEIENDLIQPINPDAAVSTDIADRLINNRDARMEN CCCCCCCCCEEECCEECCCCCCCCCCCCCCHHCCCCCCCHHHHHHHHHHHHCCCCHHHHH LWSTIRGGMSGHNNEHDDIHVHVGQETTIWHDGGSLFTITTEGEDTYTTETDPNGENTYW HHHHHHCCCCCCCCCCCEEEEEECCCEEEEECCCEEEEEEECCCCCCCCCCCCCCCCCCC RNGEEISEEDHAYGDPTEGQIEGARSNLGSHAGGEDEGEGGWWDSFWDWVTGNNITPYPG CCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCCCCCCC LEDPGRTPWWTTANAYNLDSLINQVDPHLASEYLLEEVVTTSLENRIVDNLLLQGNNTSA CCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCE QIEGTDELTNFDKGLLANKVTTNFEHAQDFGEPIAADHDVFSFGGITQSMPLSSSDENVL EEECCHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCCCCCEEECCCCCCCCCCCCCCCEEE LTVDNVMPQQMLSNNMTTPIEF EEECCCCHHHHHHCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA