| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863454
Identifier: 33863454
GI number: 33863454
Start: 1274940
End: 1275185
Strand: Direct
Name: 33863454
Synonym: PMT1184
Alternate gene names: NA
Gene position: 1274940-1275185 (Clockwise)
Preceding gene: 33863453
Following gene: 33863455
Centisome position: 52.88
GC content: 50.41
Gene sequence:
>246_bases ATGACGATCTCTAAGATTGAGATTCAATGGCCCAATGGCACAAGATCCCATACAGAACCAGGGATTGATTGGCTCCAGGT TGCTCGAGACGCAGGAATCATCATTCCCACAGGCTGCTTACAAGGGAGCTGTGGTGCTTGTGAGATTGAAGTGAATGGAG AAGTGGTGAGAGCCTGCATCGCCATCGTTCCCAGAACGAAGTCATGCCAACTCAAGGTGGAGTTCGCCGATGATCCTTTC TGGTGA
Upstream 100 bases:
>100_bases CGACCGATATATCCAACCATGAGCAACAAAGAGAACAACTACTCAATCGTCTCGCCGATGTTTTCGAAGAACATGTCAAC ATCAACCCACTGCTGGGAAC
Downstream 100 bases:
>100_bases TCTATCGCAGAGCTATCAATCCTTTTTAAACAGCATTTGCCTTACAGCTTTTGCAGGAAGCAACGGGGGTTTAGCACTGA TGACTTTCTACCGGGAGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 81; Mature: 80
Protein sequence:
>81_residues MTISKIEIQWPNGTRSHTEPGIDWLQVARDAGIIIPTGCLQGSCGACEIEVNGEVVRACIAIVPRTKSCQLKVEFADDPF W
Sequences:
>Translated_81_residues MTISKIEIQWPNGTRSHTEPGIDWLQVARDAGIIIPTGCLQGSCGACEIEVNGEVVRACIAIVPRTKSCQLKVEFADDPF W >Mature_80_residues TISKIEIQWPNGTRSHTEPGIDWLQVARDAGIIIPTGCLQGSCGACEIEVNGEVVRACIAIVPRTKSCQLKVEFADDPFW
Specific function: Unknown
COG id: COG0633
COG function: function code C; Ferredoxin
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8871; Mature: 8740
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00197 2FE2S_FER_1 ; PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
6.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 7.4 %Cys+Met (Translated Protein) 6.2 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTISKIEIQWPNGTRSHTEPGIDWLQVARDAGIIIPTGCLQGSCGACEIEVNGEVVRACI CCCEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCHHHHHHH AIVPRTKSCQLKVEFADDPFW HHCCCCCCCEEEEEECCCCCC >Mature Secondary Structure TISKIEIQWPNGTRSHTEPGIDWLQVARDAGIIIPTGCLQGSCGACEIEVNGEVVRACI CCEEEEEECCCCCCCCCCCCCHHHHHHCCCCEEEECCCCCCCCCEEEEEECCHHHHHHH AIVPRTKSCQLKVEFADDPFW HHCCCCCCCEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA