| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is mhpC [H]
Identifier: 33863445
GI number: 33863445
Start: 1266708
End: 1267706
Strand: Direct
Name: mhpC [H]
Synonym: PMT1175
Alternate gene names: 33863445
Gene position: 1266708-1267706 (Clockwise)
Preceding gene: 33863440
Following gene: 33863446
Centisome position: 52.54
GC content: 54.05
Gene sequence:
>999_bases TTGGTTCAAGCCGCTTTGTTTGCAACTGACTTCCAGACTGCCGAGCGGGCCATTCAAGAGACAGGTGCTGACTGGGGCGA ATCCCATGATTGGTATTGGCAAGGCCTACGTTGTCACTGGCGTGTACTGGGAGCAGAGGATGCACGGCCACTCGTGCTCA TCCACGGATTCGGTGCCAGCAGCGCTCATTGGCGACACAATGCTGCACCCCTAAAAGCGGCAGGATTCCGCGTCTACAGC ATTGATCTGATCGGTTTTGGAGCTTCAGCCCAGCCAGGACTGAAGCAATTTCGACGCCTCGACAATCGACTGTGGGGCAA ACAATTAGCAGCCTTTCTTGAGCAAATTGTCCAGGCCAGCCCCTCTCAACAAGCAGTACTAATAGGCAATTCTCTAGGAG CACTAACGGCTCTCACCACAGCCGCATTCCGCCCAGACCTTGTTGGAGCTGTGGTAGCAGCTCCATTACCGGATCCTGCA TTGGTTGAACCATTGAGCTTCCACCCCACCCGCTGGTGGCGCCGGTTAAAGCACAAGTTGATCGCAATCATCTTCCGCCT CTTGCCTCTGGAACTGATTGTTCCTCTCATCGCACGAACGCCACTCCTTAAAGCAGCTCTTCAAATGGGCTACCACCACT CCATCCATTTAGACCATGAGCTACTACACCTGATCGCCCAACCTGCAAGGCGACCCTCGGCAGCTCGCGCCCTACGAGCG ATGTGCGTTGGCATGACACTGCGGCCAGTGGGCTGCACAGCTCCTCGCTTACTAAAACGCCTTGCTAGCAGGCCCGATCG CCCCCCCATATTGCTTCTCTGGGGACGAGAGGACCGTTTTGTGCCATTAAAAATTGGCCATCGACTGCAGCATCAATACC CATGGATAACGCTTTCAGTGCTTAATGAAACTGGCCATTGCCCCCATGACGAATCCACCCAGGCTTTTGATCAAGCCGTG TTCAGCTGGCTGAACCTTAATTTAGGTAATGAACAATAA
Upstream 100 bases:
>100_bases CCAATAAAACCGAAAGATCACGGGAAGGACGAGACTCTGGGCGGAAGAAACCACCTCCTGGCTCCAAAACGACTGAGCCT TCGCGATAGTGGGTGGTGGG
Downstream 100 bases:
>100_bases AGGGCATGAAGCACACCCTTTCAGTGCTAGTCGAAGACGAATCCGGAGCTCTAAGCCGGATCGCAGGACTTTTTGCACGC CGTGGTTTCAACATCGACAG
Product: alpha/beta hydrolase superfamily protein
Products: 2-oxopent-4-enoate; succinate [C]
Alternate protein names: 2-hydroxy-6-ketonona-2,4-diene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4,7-triene-1,9-dioic acid 5,6-hydrolase; 2-hydroxy-6-oxonona-2,4-diene-1,9-dioic acid 5,6-hydrolase [H]
Number of amino acids: Translated: 332; Mature: 332
Protein sequence:
>332_residues MVQAALFATDFQTAERAIQETGADWGESHDWYWQGLRCHWRVLGAEDARPLVLIHGFGASSAHWRHNAAPLKAAGFRVYS IDLIGFGASAQPGLKQFRRLDNRLWGKQLAAFLEQIVQASPSQQAVLIGNSLGALTALTTAAFRPDLVGAVVAAPLPDPA LVEPLSFHPTRWWRRLKHKLIAIIFRLLPLELIVPLIARTPLLKAALQMGYHHSIHLDHELLHLIAQPARRPSAARALRA MCVGMTLRPVGCTAPRLLKRLASRPDRPPILLLWGREDRFVPLKIGHRLQHQYPWITLSVLNETGHCPHDESTQAFDQAV FSWLNLNLGNEQ
Sequences:
>Translated_332_residues MVQAALFATDFQTAERAIQETGADWGESHDWYWQGLRCHWRVLGAEDARPLVLIHGFGASSAHWRHNAAPLKAAGFRVYS IDLIGFGASAQPGLKQFRRLDNRLWGKQLAAFLEQIVQASPSQQAVLIGNSLGALTALTTAAFRPDLVGAVVAAPLPDPA LVEPLSFHPTRWWRRLKHKLIAIIFRLLPLELIVPLIARTPLLKAALQMGYHHSIHLDHELLHLIAQPARRPSAARALRA MCVGMTLRPVGCTAPRLLKRLASRPDRPPILLLWGREDRFVPLKIGHRLQHQYPWITLSVLNETGHCPHDESTQAFDQAV FSWLNLNLGNEQ >Mature_332_residues MVQAALFATDFQTAERAIQETGADWGESHDWYWQGLRCHWRVLGAEDARPLVLIHGFGASSAHWRHNAAPLKAAGFRVYS IDLIGFGASAQPGLKQFRRLDNRLWGKQLAAFLEQIVQASPSQQAVLIGNSLGALTALTTAAFRPDLVGAVVAAPLPDPA LVEPLSFHPTRWWRRLKHKLIAIIFRLLPLELIVPLIARTPLLKAALQMGYHHSIHLDHELLHLIAQPARRPSAARALRA MCVGMTLRPVGCTAPRLLKRLASRPDRPPILLLWGREDRFVPLKIGHRLQHQYPWITLSVLNETGHCPHDESTQAFDQAV FSWLNLNLGNEQ
Specific function: Catalyzes the cleavage of the C5-C6 bond of 2-hydroxy-6- oxononadienedioate and 2-hydroxy-6-oxononatrienedioate, a dienol ring fission product of the bacterial meta-cleavage pathway for degradation of phenylpropionic acid [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase superfamily. MhpC family [H]
Homologues:
Organism=Escherichia coli, GI87081721, Length=298, Percent_Identity=25.8389261744966, Blast_Score=70, Evalue=3e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR000639 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: 3.7.1.- [C]
Molecular weight: Translated: 37137; Mature: 37137
Theoretical pI: Translated: 10.39; Mature: 10.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVQAALFATDFQTAERAIQETGADWGESHDWYWQGLRCHWRVLGAEDARPLVLIHGFGAS CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEEECCCCCCCEEEEEECCCC SAHWRHNAAPLKAAGFRVYSIDLIGFGASAQPGLKQFRRLDNRLWGKQLAAFLEQIVQAS CCCCCCCCCCCHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSQQAVLIGNSLGALTALTTAAFRPDLVGAVVAAPLPDPALVEPLSFHPTRWWRRLKHKL CCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHH IAIIFRLLPLELIVPLIARTPLLKAALQMGYHHSIHLDHELLHLIAQPARRPSAARALRA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCHHHHHHHH MCVGMTLRPVGCTAPRLLKRLASRPDRPPILLLWGREDRFVPLKIGHRLQHQYPWITLSV HHHCCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCHHHHHCCCEEEEEE LNETGHCPHDESTQAFDQAVFSWLNLNLGNEQ ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure MVQAALFATDFQTAERAIQETGADWGESHDWYWQGLRCHWRVLGAEDARPLVLIHGFGAS CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHCCCCEEEEEEECCCCCCCEEEEEECCCC SAHWRHNAAPLKAAGFRVYSIDLIGFGASAQPGLKQFRRLDNRLWGKQLAAFLEQIVQAS CCCCCCCCCCCHHCCEEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PSQQAVLIGNSLGALTALTTAAFRPDLVGAVVAAPLPDPALVEPLSFHPTRWWRRLKHKL CCCCEEEEECCHHHHHHHHHHHCCCHHHHHHHHCCCCCHHHCCCCCCCHHHHHHHHHHHH IAIIFRLLPLELIVPLIARTPLLKAALQMGYHHSIHLDHELLHLIAQPARRPSAARALRA HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCEEECCHHHHHHHHCCCCCCHHHHHHHH MCVGMTLRPVGCTAPRLLKRLASRPDRPPILLLWGREDRFVPLKIGHRLQHQYPWITLSV HHHCCEECCCCCCHHHHHHHHHCCCCCCCEEEEECCCCCEEEEECCHHHHHCCCEEEEEE LNETGHCPHDESTQAFDQAVFSWLNLNLGNEQ ECCCCCCCCCCHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: 2-hydroxy-6-ketononadienedicarboxylate; H2O [C]
Specific reaction: 2-hydroxy-6-ketononadienedicarboxylate + H2O = 2-oxopent-4-enoate + succinate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA