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The map label for this gene is pbsY

Identifier: 33863319

GI number: 33863319

Start: 1129496

End: 1129612

Strand: Direct

Name: pbsY

Synonym: PMT1048

Alternate gene names: 33863319

Gene position: 1129496-1129612 (Clockwise)

Preceding gene: 33863318

Following gene: 33863320

Centisome position: 46.85

GC content: 48.72

Gene sequence:

>117_bases
ATGATTCTCATCGTTCTCCTCCCTATTTTACTTGCCGCCACCTGGGCCTTTATCAACATCCGCGGTGCTGCTTTAAAGCA
ACAGGGCTTGGGGCTTGTCAGCAAAAACAAAGGCTAA

Upstream 100 bases:

>100_bases
TGATGAAAATTCGATCAGCTGCTGAGGCCAAGCATGCTTGGCCTTATGTAAGTCCGTAGAATCGGTTCTCTGCAAAATCC
ACTAAGCGATCAGCCCCCTC

Downstream 100 bases:

>100_bases
AAATCCGCAATGGCCATCCCCAAATGGCCACTACCTAAGCTCGAGTTCAGGCCAAATCCCGAATGACCTGAACTCTTGAG
TTCCTTCCCTACTGTGCTTG

Product: photosystem II protein Y

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 38; Mature: 38

Protein sequence:

>38_residues
MILIVLLPILLAATWAFINIRGAALKQQGLGLVSKNKG

Sequences:

>Translated_38_residues
MILIVLLPILLAATWAFINIRGAALKQQGLGLVSKNKG
>Mature_38_residues
MILIVLLPILLAATWAFINIRGAALKQQGLGLVSKNKG

Specific function: Manganese-binding polypeptide with L-arginine metabolizing enzyme activity. Component of the core of photosystem II

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the psbY family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PSBY_PROMM (P59909)

Other databases:

- EMBL:   BX548175
- RefSeq:   NP_894879.1
- STRING:   P59909
- GeneID:   1727650
- GenomeReviews:   BX548175_GR
- KEGG:   pmt:PMT1048
- NMPDR:   fig|74547.1.peg.1046
- ProtClustDB:   PRK13240
- BioCyc:   PMAR74547:PMT1048-MONOMER
- GO:   GO:0015979
- HAMAP:   MF_00717
- InterPro:   IPR009388

Pfam domain/function: PF06298 PsbY

EC number: NA

Molecular weight: Translated: 4046; Mature: 4046

Theoretical pI: Translated: 11.93; Mature: 11.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xd545b80)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILIVLLPILLAATWAFINIRGAALKQQGLGLVSKNKG
CHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCH
>Mature Secondary Structure
MILIVLLPILLAATWAFINIRGAALKQQGLGLVSKNKG
CHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12917642