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The map label for this gene is clcD [C]

Identifier: 33863302

GI number: 33863302

Start: 1109710

End: 1110450

Strand: Direct

Name: clcD [C]

Synonym: PMT1031

Alternate gene names: 33863302

Gene position: 1109710-1110450 (Clockwise)

Preceding gene: 33863301

Following gene: 33863303

Centisome position: 46.03

GC content: 52.63

Gene sequence:

>741_bases
ATGAAAAGCGAATGGATTGTGATCAAAGAAGGCTCAGTCCCCCTGCGCTGCTGGTGGTCAAAACCGAGTCAAGGTCGTGA
TGAAATCGTTGAAGGTCCAAATCGTGTTGCCCTGGTGTTACCAGAAATCTTCGGAGTCAATAACTGGGTTCGCAGTGTGG
CCGATCGCCTCGCCACCAGAGGCATCCCAGCCCTGGCGATGCCACTATTTTCTCGAACCGCACCGGAGCTAGAGCTTGGC
TATAGCGAAGACAACCTGATCGAAGGTCGACGACACAAGGACTCAACCTCAATGGAGCAAATCCTGACCGATACCTACAC
AGCTATTTGCTGGCTTAACAAACAGCTTGATCAACCACAAATCACTGTGATCGGCTTCTGTTTCGGCGGACACGCTGCTC
TGATCACTGCAACCATGACCGAGGTGAGAGAAACCTTCAATTTTTATGGTGCCGGTGTAAGCAAAACCCGCCCGGGAGGT
GGTGCACCAAGCCTCGAATTATTGCCGCAGGTCTCAGGCCGACTGACATGTCTGTGCGGTACAGCAGATCCGTTGATCCC
AACTTCAGATCGGCAAGCAATCCAAGCCGCATTACGCATGCAGGATCCTGATGAAGAGCGACTGCGCTACGTAGAGATCA
TTGGCGCCGATCATGGTTTTATGTGCGAAGAAAGAGACAGCTTCGCCGCTGAAGCTTCCGCCCTAGGTTGGCACCTACTG
CTAGAGAGTCTCGAACGCTAA

Upstream 100 bases:

>100_bases
ATCTAGGCAAAGCAACTCCTAGATCAGCCAGCTAAAGGCCCCATACTGCAGAAATCTGACAGAAGGCTTCGCACCGAAGA
CTCTTGAGACAGCTACTCAA

Downstream 100 bases:

>100_bases
TCATTTGGCCGCTTCTGGTCTGGCCTCATCCTTGCGACGACCAATTCTGCTTAAAAGGCCTGGTTTTAAACCCTTTTGTC
AAAGCCCAGTCCACGACATC

Product: dienelactone hydrolase

Products: NA

Alternate protein names: Dienelactone hydrolase; DLH [H]

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MKSEWIVIKEGSVPLRCWWSKPSQGRDEIVEGPNRVALVLPEIFGVNNWVRSVADRLATRGIPALAMPLFSRTAPELELG
YSEDNLIEGRRHKDSTSMEQILTDTYTAICWLNKQLDQPQITVIGFCFGGHAALITATMTEVRETFNFYGAGVSKTRPGG
GAPSLELLPQVSGRLTCLCGTADPLIPTSDRQAIQAALRMQDPDEERLRYVEIIGADHGFMCEERDSFAAEASALGWHLL
LESLER

Sequences:

>Translated_246_residues
MKSEWIVIKEGSVPLRCWWSKPSQGRDEIVEGPNRVALVLPEIFGVNNWVRSVADRLATRGIPALAMPLFSRTAPELELG
YSEDNLIEGRRHKDSTSMEQILTDTYTAICWLNKQLDQPQITVIGFCFGGHAALITATMTEVRETFNFYGAGVSKTRPGG
GAPSLELLPQVSGRLTCLCGTADPLIPTSDRQAIQAALRMQDPDEERLRYVEIIGADHGFMCEERDSFAAEASALGWHLL
LESLER
>Mature_246_residues
MKSEWIVIKEGSVPLRCWWSKPSQGRDEIVEGPNRVALVLPEIFGVNNWVRSVADRLATRGIPALAMPLFSRTAPELELG
YSEDNLIEGRRHKDSTSMEQILTDTYTAICWLNKQLDQPQITVIGFCFGGHAALITATMTEVRETFNFYGAGVSKTRPGG
GAPSLELLPQVSGRLTCLCGTADPLIPTSDRQAIQAALRMQDPDEERLRYVEIIGADHGFMCEERDSFAAEASALGWHLL
LESLER

Specific function: Unknown

COG id: COG0412

COG function: function code Q; Dienelactone hydrolase and related enzymes

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dienelactone hydrolase family [H]

Homologues:

Organism=Escherichia coli, GI48994982, Length=233, Percent_Identity=26.6094420600858, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: =3.1.1.45 [H]

Molecular weight: Translated: 27262; Mature: 27262

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSEWIVIKEGSVPLRCWWSKPSQGRDEIVEGPNRVALVLPEIFGVNNWVRSVADRLATR
CCCCEEEEECCCCEEEEEECCCCCCCHHHHCCCCEEEEEEHHHHCCHHHHHHHHHHHHHC
GIPALAMPLFSRTAPELELGYSEDNLIEGRRHKDSTSMEQILTDTYTAICWLNKQLDQPQ
CCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCC
ITVIGFCFGGHAALITATMTEVRETFNFYGAGVSKTRPGGGAPSLELLPQVSGRLTCLCG
EEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEC
TADPLIPTSDRQAIQAALRMQDPDEERLRYVEIIGADHGFMCEERDSFAAEASALGWHLL
CCCCCCCCCHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
LESLER
HHHHCC
>Mature Secondary Structure
MKSEWIVIKEGSVPLRCWWSKPSQGRDEIVEGPNRVALVLPEIFGVNNWVRSVADRLATR
CCCCEEEEECCCCEEEEEECCCCCCCHHHHCCCCEEEEEEHHHHCCHHHHHHHHHHHHHC
GIPALAMPLFSRTAPELELGYSEDNLIEGRRHKDSTSMEQILTDTYTAICWLNKQLDQPQ
CCCHHHHHHHHCCCCCEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCCCC
ITVIGFCFGGHAALITATMTEVRETFNFYGAGVSKTRPGGGAPSLELLPQVSGRLTCLCG
EEEEEEEECCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCEEEEEC
TADPLIPTSDRQAIQAALRMQDPDEERLRYVEIIGADHGFMCEERDSFAAEASALGWHLL
CCCCCCCCCHHHHHHHHHHCCCCCHHHEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH
LESLER
HHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]