BacMap

Definition	Prochlorococcus marinus str. MIT 9313 chromosome, complete genome.
Accession	NC_005071
Length	2,410,873

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The map label for this gene is 33863295

Identifier: 33863295

GI number: 33863295

Start: 1100124

End: 1100915

Strand: Direct

Name: 33863295

Synonym: PMT1024

Alternate gene names: NA

Gene position: 1100124-1100915 (Clockwise)

Preceding gene: 33863294

Following gene: 33863301

Centisome position: 45.63

GC content: 41.92

Gene sequence:

>792_bases
TTGGGGAGCATCATGGGATTCCGCCTCAAACTGCATGAACAGGTAATCAATCAATCCACAGGAGGCAATACATCGATATT
CAATAAGTTAAGTGGCGCAACAATTGCTGTTTCAATCTTTTTTGCAGTTCTAAGCACTGAAAATCAAATTGATTTTCAGT
TTGGCGGACAAATAGATGCAATCGATTGGATCATTGGCTGTCTGTTTTGCATTGAATATTTTTGTCGAGTGTGGACTGCC
CCACTTGAGGGCAAATATGGAGAGGGTATAGAAGGCACGATTCGCTACATGTTCTCACCAATGGCCATTATTGATCTGAT
TGCAATTATCCCCTCCTTTATCGGCGTAAGAACAGAACTAAAGATCCTGAGAATTATTCGTCTTCTTACGATTCTAAAGG
TTGGCCGCAGCGAAAGATTCAAGCAAAGCATGCTTCATTTCAACTATGCACTCAGATCCAAGAGCCAAGAGCTGCAGATA
TCTACTGTTTATACATTATTACTTTTACTCATTAGCAGCACATTCATGTATCTTGCAGAGTCATCTATTCAGCCTGATCT
ATTAGGTTCAATACCAAGATGCCTCTGGTGGTCAATTAATGCAGTCAGCTCAGTGGGGCATGGAGATTCAGTGCCAATTA
GTGCGGTAGGCAAGATTATCGCTTCAGTAACTTCTCTTATGGGAATTGGCGCCATCGCCATACCTACCGGAATTCTTGCC
GCAGGTTTTAGCGAATCAATTGCTGTGCAAAAGAATAATCTTGAGGAATCTGCTCAGGAAAGCATTGCTTAG

Upstream 100 bases:

>100_bases
TGCTCACGTCTACCACGAAAGCTCCGGACAACTGGCACGCTAAGGCTCGCTTGAGCGACCCGTGCCTAGGATGGATTGAA
ATCAAAAGGGAGAGGGTACC

Downstream 100 bases:

>100_bases
GAATCGACACACGGCAATTTGTTCATAACATCAAACAATCAAATCCTTGTTTTCAGGCAAAAGTTGAAAGATGGGAGTTT
TAGCTGTAGTTGGCTAGACA

Product: VIC family potassium channel protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MGSIMGFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDAIDWIIGCLFCIEYFCRVWTA
PLEGKYGEGIEGTIRYMFSPMAIIDLIAIIPSFIGVRTELKILRIIRLLTILKVGRSERFKQSMLHFNYALRSKSQELQI
STVYTLLLLLISSTFMYLAESSIQPDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILA
AGFSESIAVQKNNLEESAQESIA

Sequences:

>Translated_263_residues
MGSIMGFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDAIDWIIGCLFCIEYFCRVWTA
PLEGKYGEGIEGTIRYMFSPMAIIDLIAIIPSFIGVRTELKILRIIRLLTILKVGRSERFKQSMLHFNYALRSKSQELQI
STVYTLLLLLISSTFMYLAESSIQPDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILA
AGFSESIAVQKNNLEESAQESIA
>Mature_262_residues
GSIMGFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDAIDWIIGCLFCIEYFCRVWTAP
LEGKYGEGIEGTIRYMFSPMAIIDLIAIIPSFIGVRTELKILRIIRLLTILKVGRSERFKQSMLHFNYALRSKSQELQIS
TVYTLLLLLISSTFMYLAESSIQPDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILAA
GFSESIAVQKNNLEESAQESIA

Specific function: Unknown

COG id: COG1226

COG function: function code P; Kef-type K+ transport systems, predicted NAD-binding component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cyclic nucleotide-binding domain [H]

Homologues:

Organism=Homo sapiens, GI32479527, Length=265, Percent_Identity=30.188679245283, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI32479525, Length=246, Percent_Identity=31.7073170731707, Blast_Score=103, Evalue=2e-22,
Organism=Homo sapiens, GI27436974, Length=244, Percent_Identity=29.0983606557377, Blast_Score=102, Evalue=3e-22,
Organism=Homo sapiens, GI26051262, Length=219, Percent_Identity=26.4840182648402, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI26051260, Length=219, Percent_Identity=26.4840182648402, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI26051266, Length=219, Percent_Identity=26.4840182648402, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI26051264, Length=219, Percent_Identity=26.4840182648402, Blast_Score=96, Evalue=3e-20,
Organism=Homo sapiens, GI27436981, Length=275, Percent_Identity=26.5454545454545, Blast_Score=93, Evalue=3e-19,
Organism=Homo sapiens, GI26638655, Length=203, Percent_Identity=29.5566502463054, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI26051268, Length=226, Percent_Identity=26.1061946902655, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI4826784, Length=244, Percent_Identity=28.6885245901639, Blast_Score=92, Evalue=6e-19,
Organism=Homo sapiens, GI26638653, Length=203, Percent_Identity=29.5566502463054, Blast_Score=92, Evalue=7e-19,
Organism=Homo sapiens, GI27436986, Length=274, Percent_Identity=27.007299270073, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI27436984, Length=274, Percent_Identity=27.007299270073, Blast_Score=91, Evalue=8e-19,
Organism=Homo sapiens, GI4826782, Length=217, Percent_Identity=26.7281105990783, Blast_Score=91, Evalue=1e-18,
Organism=Homo sapiens, GI9789987, Length=275, Percent_Identity=26.9090909090909, Blast_Score=90, Evalue=2e-18,
Organism=Homo sapiens, GI119395748, Length=258, Percent_Identity=25.1937984496124, Blast_Score=89, Evalue=3e-18,
Organism=Homo sapiens, GI4504817, Length=206, Percent_Identity=25.7281553398058, Blast_Score=89, Evalue=4e-18,
Organism=Homo sapiens, GI236462242, Length=203, Percent_Identity=27.0935960591133, Blast_Score=88, Evalue=8e-18,
Organism=Homo sapiens, GI25952092, Length=210, Percent_Identity=24.2857142857143, Blast_Score=87, Evalue=1e-17,
Organism=Homo sapiens, GI28373065, Length=203, Percent_Identity=27.0935960591133, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI236461719, Length=203, Percent_Identity=27.0935960591133, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI236462079, Length=203, Percent_Identity=27.0935960591133, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI236461942, Length=203, Percent_Identity=27.0935960591133, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI4504821, Length=209, Percent_Identity=26.3157894736842, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI88758565, Length=189, Percent_Identity=26.4550264550265, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI4758630, Length=227, Percent_Identity=25.9911894273128, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI25952087, Length=196, Percent_Identity=26.530612244898, Blast_Score=85, Evalue=5e-17,
Organism=Homo sapiens, GI20070166, Length=209, Percent_Identity=27.2727272727273, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI25952108, Length=210, Percent_Identity=27.6190476190476, Blast_Score=84, Evalue=1e-16,
Organism=Homo sapiens, GI5031819, Length=137, Percent_Identity=26.2773722627737, Blast_Score=73, Evalue=3e-13,
Organism=Homo sapiens, GI27436988, Length=209, Percent_Identity=26.7942583732057, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI13492973, Length=197, Percent_Identity=26.3959390862944, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI24497458, Length=222, Percent_Identity=24.7747747747748, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI45383011, Length=171, Percent_Identity=24.5614035087719, Blast_Score=68, Evalue=6e-12,
Organism=Homo sapiens, GI21217561, Length=222, Percent_Identity=24.7747747747748, Blast_Score=68, Evalue=7e-12,
Organism=Homo sapiens, GI21217563, Length=223, Percent_Identity=24.6636771300448, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI27436996, Length=272, Percent_Identity=25.7352941176471, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI24497460, Length=169, Percent_Identity=26.0355029585799, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI4826786, Length=263, Percent_Identity=22.8136882129278, Blast_Score=65, Evalue=6e-11,
Organism=Homo sapiens, GI163792201, Length=263, Percent_Identity=22.8136882129278, Blast_Score=65, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17544122, Length=281, Percent_Identity=28.8256227758007, Blast_Score=102, Evalue=3e-22,
Organism=Caenorhabditis elegans, GI25147238, Length=193, Percent_Identity=35.2331606217617, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI25147242, Length=193, Percent_Identity=35.2331606217617, Blast_Score=99, Evalue=2e-21,
Organism=Caenorhabditis elegans, GI71989381, Length=194, Percent_Identity=29.3814432989691, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71989376, Length=194, Percent_Identity=29.3814432989691, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71989361, Length=191, Percent_Identity=27.7486910994764, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI71989369, Length=194, Percent_Identity=29.3814432989691, Blast_Score=96, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI32564066, Length=250, Percent_Identity=28.4, Blast_Score=89, Evalue=3e-18,
Organism=Caenorhabditis elegans, GI71994134, Length=252, Percent_Identity=25.3968253968254, Blast_Score=88, Evalue=4e-18,
Organism=Caenorhabditis elegans, GI193206869, Length=201, Percent_Identity=23.3830845771144, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI25148255, Length=201, Percent_Identity=23.3830845771144, Blast_Score=82, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI71994313, Length=197, Percent_Identity=27.9187817258883, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI72000220, Length=184, Percent_Identity=25.5434782608696, Blast_Score=73, Evalue=1e-13,
Organism=Caenorhabditis elegans, GI71985535, Length=219, Percent_Identity=25.1141552511416, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI71986003, Length=210, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71986008, Length=210, Percent_Identity=26.1904761904762, Blast_Score=72, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI71986011, Length=193, Percent_Identity=26.9430051813472, Blast_Score=71, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17569273, Length=187, Percent_Identity=27.807486631016, Blast_Score=70, Evalue=8e-13,
Organism=Caenorhabditis elegans, GI71994320, Length=187, Percent_Identity=28.8770053475936, Blast_Score=70, Evalue=9e-13,
Organism=Caenorhabditis elegans, GI32564076, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193207406, Length=228, Percent_Identity=24.1228070175439, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32564084, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32564088, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32564086, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI32564090, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32564082, Length=206, Percent_Identity=27.1844660194175, Blast_Score=70, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI32564080, Length=206, Percent_Identity=27.1844660194175, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71986574, Length=161, Percent_Identity=26.0869565217391, Blast_Score=64, Evalue=6e-11,
Organism=Drosophila melanogaster, GI221330117, Length=228, Percent_Identity=29.8245614035088, Blast_Score=96, Evalue=3e-20,
Organism=Drosophila melanogaster, GI221330119, Length=228, Percent_Identity=29.8245614035088, Blast_Score=95, Evalue=4e-20,
Organism=Drosophila melanogaster, GI281363095, Length=228, Percent_Identity=29.8245614035088, Blast_Score=95, Evalue=5e-20,
Organism=Drosophila melanogaster, GI281363097, Length=226, Percent_Identity=30.0884955752212, Blast_Score=95, Evalue=6e-20,
Organism=Drosophila melanogaster, GI116007764, Length=238, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI281365536, Length=238, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24656294, Length=238, Percent_Identity=29.4117647058824, Blast_Score=92, Evalue=4e-19,
Organism=Drosophila melanogaster, GI24656289, Length=238, Percent_Identity=29.4117647058824, Blast_Score=91, Evalue=5e-19,
Organism=Drosophila melanogaster, GI17737641, Length=202, Percent_Identity=28.7128712871287, Blast_Score=91, Evalue=7e-19,
Organism=Drosophila melanogaster, GI161084970, Length=202, Percent_Identity=28.7128712871287, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24642914, Length=237, Percent_Identity=24.4725738396624, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24642916, Length=237, Percent_Identity=24.4725738396624, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24642910, Length=237, Percent_Identity=24.4725738396624, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI45555859, Length=237, Percent_Identity=24.4725738396624, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI45549143, Length=237, Percent_Identity=24.4725738396624, Blast_Score=87, Evalue=9e-18,
Organism=Drosophila melanogaster, GI161076829, Length=195, Percent_Identity=25.6410256410256, Blast_Score=64, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018490
- InterPro:   IPR018488
- InterPro:   IPR000595
- InterPro:   IPR005821
- InterPro:   IPR003091
- InterPro:   IPR014710 [H]

Pfam domain/function: PF00027 cNMP_binding; PF00520 Ion_trans [H]

EC number: NA

Molecular weight: Translated: 28737; Mature: 28606

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSIMGFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDA
CCCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCHH
IDWIIGCLFCIEYFCRVWTAPLEGKYGEGIEGTIRYMFSPMAIIDLIAIIPSFIGVRTEL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILRIIRLLTILKVGRSERFKQSMLHFNYALRSKSQELQISTVYTLLLLLISSTFMYLAE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSIQPDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AGFSESIAVQKNNLEESAQESIA
HCCCCHHEEECCCHHHHHHHCCC
>Mature Secondary Structure 
GSIMGFRLKLHEQVINQSTGGNTSIFNKLSGATIAVSIFFAVLSTENQIDFQFGGQIDA
CCCHHHHHHHHHHHHCCCCCCCHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEECCCCHH
IDWIIGCLFCIEYFCRVWTAPLEGKYGEGIEGTIRYMFSPMAIIDLIAIIPSFIGVRTEL
HHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KILRIIRLLTILKVGRSERFKQSMLHFNYALRSKSQELQISTVYTLLLLLISSTFMYLAE
HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
SSIQPDLLGSIPRCLWWSINAVSSVGHGDSVPISAVGKIIASVTSLMGIGAIAIPTGILA
CCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AGFSESIAVQKNNLEESAQESIA
HCCCCHHEEECCCHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1522059 [H]