| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863294
Identifier: 33863294
GI number: 33863294
Start: 1099543
End: 1100169
Strand: Direct
Name: 33863294
Synonym: PMT1023
Alternate gene names: NA
Gene position: 1099543-1100169 (Clockwise)
Preceding gene: 33863292
Following gene: 33863295
Centisome position: 45.61
GC content: 43.7
Gene sequence:
>627_bases GTGATGACTGAATGCAAAAGACCTACAATAATGGGCATAACATTTTCAGTGAAACGTGGTTTCTTGAGTATTAAAAACAC CAACTTTATAAACAACCACGATTGCAAATACCACATAAGAATCCATTCTCAGACCAGGCAACGTAATAACCATAACTACT ATGGACTAGGCATGAGATATTGCCTAATCTATTACTTAAAGAAAGAAAAGTATCGTTTGGAATTGCTTTATTTCTCACCT TTTCTTTTGATCACCTGGCTTCTCCTGCGTCCAATCGAAGATTCCCTGATAGCCACCAAATGCCGAGCTAATCCCGAACA TCGCAATAAACAATACTCCGACAACCACAATCACTCCAATCGTCAGTGGACTCAAGTCAAGAGCCATCGCGAAAACAAGA GCACGCATGACGATCCGCAAGACATCTTCATCATCCTCTCAGATCGAGGTCAAAGCCGAAGAATTAAGCAAACTAAATCC TTGCTCACGTCTACCACGAAAGCTCCGGACAACTGGCACGCTAAGGCTCGCTTGAGCGACCCGTGCCTAGGATGGATTGA AATCAAAAGGGAGAGGGTACCTTGGGGAGCATCATGGGATTCCGCCTCAAACTGCATGAACAGGTAA
Upstream 100 bases:
>100_bases TGATGGCTCAATTCAAACTTTAAAACGAACCCAATAACTGCTGAGCGATTGAGGTGCACTAATTAGCAATGGTCACTTTG TTTAGGCCTCCGACCAATAG
Downstream 100 bases:
>100_bases TCAATCAATCCACAGGAGGCAATACATCGATATTCAATAAGTTAAGTGGCGCAACAATTGCTGTTTCAATCTTTTTTGCA GTTCTAAGCACTGAAAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 208; Mature: 208
Protein sequence:
>208_residues MMTECKRPTIMGITFSVKRGFLSIKNTNFINNHDCKYHIRIHSQTRQRNNHNYYGLGMRYCLIYYLKKEKYRLELLYFSP FLLITWLLLRPIEDSLIATKCRANPEHRNKQYSDNHNHSNRQWTQVKSHRENKSTHDDPQDIFIILSDRGQSRRIKQTKS LLTSTTKAPDNWHAKARLSDPCLGWIEIKRERVPWGASWDSASNCMNR
Sequences:
>Translated_208_residues MMTECKRPTIMGITFSVKRGFLSIKNTNFINNHDCKYHIRIHSQTRQRNNHNYYGLGMRYCLIYYLKKEKYRLELLYFSP FLLITWLLLRPIEDSLIATKCRANPEHRNKQYSDNHNHSNRQWTQVKSHRENKSTHDDPQDIFIILSDRGQSRRIKQTKS LLTSTTKAPDNWHAKARLSDPCLGWIEIKRERVPWGASWDSASNCMNR >Mature_208_residues MMTECKRPTIMGITFSVKRGFLSIKNTNFINNHDCKYHIRIHSQTRQRNNHNYYGLGMRYCLIYYLKKEKYRLELLYFSP FLLITWLLLRPIEDSLIATKCRANPEHRNKQYSDNHNHSNRQWTQVKSHRENKSTHDDPQDIFIILSDRGQSRRIKQTKS LLTSTTKAPDNWHAKARLSDPCLGWIEIKRERVPWGASWDSASNCMNR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24800; Mature: 24800
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTECKRPTIMGITFSVKRGFLSIKNTNFINNHDCKYHIRIHSQTRQRNNHNYYGLGMRY CCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCHHHCCCCCEEEHHHHH CLIYYLKKEKYRLELLYFSPFLLITWLLLRPIEDSLIATKCRANPEHRNKQYSDNHNHSN HHHHHHHCCCEEEEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCC RQWTQVKSHRENKSTHDDPQDIFIILSDRGQSRRIKQTKSLLTSTTKAPDNWHAKARLSD CHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCC PCLGWIEIKRERVPWGASWDSASNCMNR CCEEEEEEEECCCCCCCCCCCHHHHHCC >Mature Secondary Structure MMTECKRPTIMGITFSVKRGFLSIKNTNFINNHDCKYHIRIHSQTRQRNNHNYYGLGMRY CCCCCCCCEEEEEEEEECCCEEEECCCCCCCCCCCEEEEEEECCHHHCCCCCEEEHHHHH CLIYYLKKEKYRLELLYFSPFLLITWLLLRPIEDSLIATKCRANPEHRNKQYSDNHNHSN HHHHHHHCCCEEEEEEEECHHHHHHHHHHCCCCHHHHHHHHCCCHHHCCCCCCCCCCCCC RQWTQVKSHRENKSTHDDPQDIFIILSDRGQSRRIKQTKSLLTSTTKAPDNWHAKARLSD CHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCC PCLGWIEIKRERVPWGASWDSASNCMNR CCEEEEEEEECCCCCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA