| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863290
Identifier: 33863290
GI number: 33863290
Start: 1095405
End: 1096115
Strand: Direct
Name: 33863290
Synonym: PMT1019
Alternate gene names: NA
Gene position: 1095405-1096115 (Clockwise)
Preceding gene: 33863289
Following gene: 33863291
Centisome position: 45.44
GC content: 54.85
Gene sequence:
>711_bases ATGCAGACCCTTGACTGGATCTGGTTGCTACACCCGATTTTCGCCGTAGCCTTGATCTACCCCCTACTGGGGATAGTCCT AAACCTGTCACTTCAAACCCGCAGTCGTCGGCTCAAACGTCAGAACGAAAGTCCAGCCAATGTCGGGAGTGTGCACAGCA ATCTCGGACGATGGCTCTCAGCCGGAGTGATCGCAATCGTGCTGCTTGCTCTGGTGGTGATGATCAGCACTGAACATCCG CTAACGGAGTTTGAGGGAGGTCTGATCCGTGCTGGATTGCTTCTACTGGTACTCATTGGAAGTTGCATCGCCTTGCTGAC AACCTGGCGAGACAAAAGACCCGCCTATCGAGCAGGCTTCTCCTTACTCTGCTGGGCAGGTGTCATCGTCCTTGGTATGC AGCCGGAAGTATTCCGCCTCGGTGACAACCCCCTCAAAGCAGAATTCTGGCAATCGCATTTCTGGGGTGGCATTGGTCTC GTTGGGCTGATGCTGTTCTCGCTGGCATCCCGACAAGAAATCCTGCGTGATCTGCGCTGGCGATGGCTGCACATCACAGC CAATAGTCTTGCAGCGGTGATCTTCCTGGCAGAAGCAATCACCGGCCCCAAAGCCCTACTAGAGATCCCCCTGAGCTGGC AAAAGCCTTACATCCAACAGGCAAAAGCCGAGCGGGTAGCTAATTACACCGCGAATGCTCCTCAACCGTAG
Upstream 100 bases:
>100_bases AGTTCAACTCAATAAGCTCTAAGCGATGGCGTGCAGGCTTTTAGCACCATTGCTAAATCCAATTTTGTCTCCCTTTTGAT TCCCCGGCCAGACCCTCACC
Downstream 100 bases:
>100_bases GAGTAGTTGTGCGCGCTCGTTCGCCAGTGCTGGAACAAACCTCACGCCGCCAAACAGACCAACGATGCGCTCTAAGCCCT CCTGATCTTTCAATTGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 236; Mature: 236
Protein sequence:
>236_residues MQTLDWIWLLHPIFAVALIYPLLGIVLNLSLQTRSRRLKRQNESPANVGSVHSNLGRWLSAGVIAIVLLALVVMISTEHP LTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGFSLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGL VGLMLFSLASRQEILRDLRWRWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPQP
Sequences:
>Translated_236_residues MQTLDWIWLLHPIFAVALIYPLLGIVLNLSLQTRSRRLKRQNESPANVGSVHSNLGRWLSAGVIAIVLLALVVMISTEHP LTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGFSLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGL VGLMLFSLASRQEILRDLRWRWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPQP >Mature_236_residues MQTLDWIWLLHPIFAVALIYPLLGIVLNLSLQTRSRRLKRQNESPANVGSVHSNLGRWLSAGVIAIVLLALVVMISTEHP LTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGFSLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGL VGLMLFSLASRQEILRDLRWRWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26319; Mature: 26319
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQTLDWIWLLHPIFAVALIYPLLGIVLNLSLQTRSRRLKRQNESPANVGSVHSNLGRWLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AGVIAIVLLALVVMISTEHPLTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGF HHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGLVGLMLFSLASRQEILRDLRW HHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPQP HEEEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MQTLDWIWLLHPIFAVALIYPLLGIVLNLSLQTRSRRLKRQNESPANVGSVHSNLGRWLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHH AGVIAIVLLALVVMISTEHPLTEFEGGLIRAGLLLLVLIGSCIALLTTWRDKRPAYRAGF HHHHHHHHHHHHHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH SLLCWAGVIVLGMQPEVFRLGDNPLKAEFWQSHFWGGIGLVGLMLFSLASRQEILRDLRW HHHHHHHHHHHCCCCCCEECCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH RWLHITANSLAAVIFLAEAITGPKALLEIPLSWQKPYIQQAKAERVANYTANAPQP HEEEEEHHHHHHHHHHHHHHCCCHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA