| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863284
Identifier: 33863284
GI number: 33863284
Start: 1088804
End: 1089553
Strand: Direct
Name: 33863284
Synonym: PMT1013
Alternate gene names: NA
Gene position: 1088804-1089553 (Clockwise)
Preceding gene: 33863283
Following gene: 33863289
Centisome position: 45.16
GC content: 42.53
Gene sequence:
>750_bases ATGGTCTTTAATCCTGCTCAAAGATACAAGACAGCTAAACATTTCATCTGGATTGCTATTCCTAGAATCAGCTTATTGAG TTTTGCTGTGATAATAAGCCCTTGGTCTAATCCTGCCCTAGCGGAAAAACTAGTTCCAATAACGACATCAGAAGGAATGG TCTTGTTGCAAAGAAGCAAGTCTGTATCAGATTACGGCTCGTTAATGGAAGCTTTTCTGACCCAATCAAACCTTGCCTAT TGCGGGGTTGCCAGTGCCGTAATGGTTTTAAACAGCCTAGCAATTCCGGCACCTCCAGTAGATGGTTTCAGAAACTACCA CTTCTGGACCCAAGACAATATCTTCAACTCGGATTCATCACAAGTAGTCATTAGCCCAGCCAAAATCAGGCGGCAAGGCA TGACACTTCAAGAACTTCAAAACCTACTCAGTCATCATGGTGTTTCTTCTAAGCGTTTACACGGAGATATCCTTAGTCTG CAAGCGTTTAGATCACTTATAAAAGCTAATCTTGACGATTCAAGTGATCGCTTGATTGTCAATTATGACAGAAAAGTTAT TGGCCAAAAAGGCGGTGGGCACTTCTCTCCACTAGCAGCTTATGACGCTGTTACTGACAAAGTTCTAATCCTAGATGTTG CCCGATATCGCTATCCTTCTGTATGGGTAAAAACACATGATCTATGGAGAGCAATGCGAACATTAGACGGCATATCAGGA TTGCAGAGAGGGATACTCGCGATTGAATAG
Upstream 100 bases:
>100_bases TATGCTCACCGAAAAGCATTGATAATGTAAGGATTCATTCCTTCTGTCAAGCAAGTCTGAAACTAGATAAAATGGTGCAC TGCTCCGCATAGGTGAGACA
Downstream 100 bases:
>100_bases TGTGCAAGATTAGGGGGAAACATTTATAAAATCAGTGCTCATGACACTTGTCCTTTTTCGCAAAGAAATACTAATACAAT AGACAAATCATTGTCCCTAT
Product: phytochelatin synthase
Products: NA
Alternate protein names: Phytochelatin Synthase-Like Protein; Phytochelatin Synthase Family; Glutathione Gamma-Glutamylcysteinyltransferase; Phytochelatin Synthase Family Protein; Phytochelatin Synthase-Like
Number of amino acids: Translated: 249; Mature: 249
Protein sequence:
>249_residues MVFNPAQRYKTAKHFIWIAIPRISLLSFAVIISPWSNPALAEKLVPITTSEGMVLLQRSKSVSDYGSLMEAFLTQSNLAY CGVASAVMVLNSLAIPAPPVDGFRNYHFWTQDNIFNSDSSQVVISPAKIRRQGMTLQELQNLLSHHGVSSKRLHGDILSL QAFRSLIKANLDDSSDRLIVNYDRKVIGQKGGGHFSPLAAYDAVTDKVLILDVARYRYPSVWVKTHDLWRAMRTLDGISG LQRGILAIE
Sequences:
>Translated_249_residues MVFNPAQRYKTAKHFIWIAIPRISLLSFAVIISPWSNPALAEKLVPITTSEGMVLLQRSKSVSDYGSLMEAFLTQSNLAY CGVASAVMVLNSLAIPAPPVDGFRNYHFWTQDNIFNSDSSQVVISPAKIRRQGMTLQELQNLLSHHGVSSKRLHGDILSL QAFRSLIKANLDDSSDRLIVNYDRKVIGQKGGGHFSPLAAYDAVTDKVLILDVARYRYPSVWVKTHDLWRAMRTLDGISG LQRGILAIE >Mature_249_residues MVFNPAQRYKTAKHFIWIAIPRISLLSFAVIISPWSNPALAEKLVPITTSEGMVLLQRSKSVSDYGSLMEAFLTQSNLAY CGVASAVMVLNSLAIPAPPVDGFRNYHFWTQDNIFNSDSSQVVISPAKIRRQGMTLQELQNLLSHHGVSSKRLHGDILSL QAFRSLIKANLDDSSDRLIVNYDRKVIGQKGGGHFSPLAAYDAVTDKVLILDVARYRYPSVWVKTHDLWRAMRTLDGISG LQRGILAIE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Caenorhabditis elegans, GI193204637, Length=217, Percent_Identity=34.1013824884793, Blast_Score=119, Evalue=1e-27, Organism=Caenorhabditis elegans, GI193204635, Length=217, Percent_Identity=34.1013824884793, Blast_Score=119, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27725; Mature: 27725
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVFNPAQRYKTAKHFIWIAIPRISLLSFAVIISPWSNPALAEKLVPITTSEGMVLLQRSK CCCCHHHHHHHHHHEEEEEEHHHHHHHHHHEECCCCCHHHHHHCCCEECCCCEEEEECCC SVSDYGSLMEAFLTQSNLAYCGVASAVMVLNSLAIPAPPVDGFRNYHFWTQDNIFNSDSS CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCC QVVISPAKIRRQGMTLQELQNLLSHHGVSSKRLHGDILSLQAFRSLIKANLDDSSDRLIV EEEEEHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE NYDRKVIGQKGGGHFSPLAAYDAVTDKVLILDVARYRYPSVWVKTHDLWRAMRTLDGISG EECHHHHCCCCCCCCCHHHHHHHHHCHHHEEEHHHHCCCEEEEEHHHHHHHHHHHHHHHH LQRGILAIE HHHCCEECC >Mature Secondary Structure MVFNPAQRYKTAKHFIWIAIPRISLLSFAVIISPWSNPALAEKLVPITTSEGMVLLQRSK CCCCHHHHHHHHHHEEEEEEHHHHHHHHHHEECCCCCHHHHHHCCCEECCCCEEEEECCC SVSDYGSLMEAFLTQSNLAYCGVASAVMVLNSLAIPAPPVDGFRNYHFWTQDNIFNSDSS CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCCCCCCC QVVISPAKIRRQGMTLQELQNLLSHHGVSSKRLHGDILSLQAFRSLIKANLDDSSDRLIV EEEEEHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCEEEE NYDRKVIGQKGGGHFSPLAAYDAVTDKVLILDVARYRYPSVWVKTHDLWRAMRTLDGISG EECHHHHCCCCCCCCCHHHHHHHHHCHHHEEEHHHHCCCEEEEEHHHHHHHHHHHHHHHH LQRGILAIE HHHCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA