| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863281
Identifier: 33863281
GI number: 33863281
Start: 1086709
End: 1087071
Strand: Direct
Name: 33863281
Synonym: PMT1010
Alternate gene names: NA
Gene position: 1086709-1087071 (Clockwise)
Preceding gene: 33863279
Following gene: 33863282
Centisome position: 45.08
GC content: 39.39
Gene sequence:
>363_bases ATGATGACATTCCTTAGTTTGATGATGAGTTTTCTAATCAGTATTTCACCAGTAGTCCCAAGTGCATTAGCTCCAGAATC AACCTCTTTTACATGTGATGGAAGTCTTGTCGAAGCAACAATCTACAACAATGAGAATGGAACATACAACAGAGTAAAAG CATATGAAGAGCTTGATGCTGGAGCTTTTATCGTGATCAACCTAGTGAATTCAAAACTAATGCTACCAAGAACCTTCAAC GTTGGCGAAACCAGTTTTACTGATGGCAAATGGTGGTGGAACTATGAAGATCATCAACATCCAACCTTCCGGGGTCTTAC ACCCCTCGGTGAAATTCAAGAATTTAGTTGTGAAGCTCTATAA
Upstream 100 bases:
>100_bases CTTTACTTATTGCGATGATTTAAAAATCAATACCTTGAGAGCACGTATTTGCCATACTATCAATCAGTTGAACCCTATTA GTTGAATCAGGACAGAGTTA
Downstream 100 bases:
>100_bases GCTAACTTTGGCTTAGGAATGGCTACCACCTTCTCTCGCGAATTAGGATTTAGTTAGTAACAAACAAGTGGATGGTTCCT AAGCTTTGCTGAATATGATT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MMTFLSLMMSFLISISPVVPSALAPESTSFTCDGSLVEATIYNNENGTYNRVKAYEELDAGAFIVINLVNSKLMLPRTFN VGETSFTDGKWWWNYEDHQHPTFRGLTPLGEIQEFSCEAL
Sequences:
>Translated_120_residues MMTFLSLMMSFLISISPVVPSALAPESTSFTCDGSLVEATIYNNENGTYNRVKAYEELDAGAFIVINLVNSKLMLPRTFN VGETSFTDGKWWWNYEDHQHPTFRGLTPLGEIQEFSCEAL >Mature_120_residues MMTFLSLMMSFLISISPVVPSALAPESTSFTCDGSLVEATIYNNENGTYNRVKAYEELDAGAFIVINLVNSKLMLPRTFN VGETSFTDGKWWWNYEDHQHPTFRGLTPLGEIQEFSCEAL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13496; Mature: 13496
Theoretical pI: Translated: 4.19; Mature: 4.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTFLSLMMSFLISISPVVPSALAPESTSFTCDGSLVEATIYNNENGTYNRVKAYEELDA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCCHHHHHHHHCCC GAFIVINLVNSKLMLPRTFNVGETSFTDGKWWWNYEDHQHPTFRGLTPLGEIQEFSCEAL CEEEEEEECCCEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCC >Mature Secondary Structure MMTFLSLMMSFLISISPVVPSALAPESTSFTCDGSLVEATIYNNENGTYNRVKAYEELDA CHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCCEEEEEEEECCCCCCHHHHHHHHCCC GAFIVINLVNSKLMLPRTFNVGETSFTDGKWWWNYEDHQHPTFRGLTPLGEIQEFSCEAL CEEEEEEECCCEEECCEECCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA