Click here to switch to the map view.

The map label for this gene is hli5

Identifier: 33863261

GI number: 33863261

Start: 1069052

End: 1069201

Strand: Direct

Name: hli5

Synonym: PMT0990

Alternate gene names: NA

Gene position: 1069052-1069201 (Clockwise)

Preceding gene: 33863260

Following gene: 33863262

Centisome position: 44.34

GC content: 40.67

Gene sequence:

>150_bases
ATGCCCATCAGTGATTTCTTAAAAGAGACCATTAATGATTGCATGACCAATAAGGCAGAATCATTGAATGGCAGGATTGC
AATGGTTGGTATGTTGGCTCTTATGGTTACGTACCTTGCAACGGGAGACATTATCCCAGGTGTTTTTTAG

Upstream 100 bases:

>100_bases
AAGACATCAACCCTTCCAGGTAGTTTCCCTGTAATTTCTAATACAGCCTTGATGAATCTCTATCTGTATCATTTGAAAGT
CATCTATATGGAGCAAGTTC

Downstream 100 bases:

>100_bases
TCTGGCGATTCTCCAATTGATGGGGAGCGATTAACTGGGAGTCATTCTTAGATTAAAACTTATATAAAACTCTAATGAAT
GGCCTCCCGATTTTCCTTAA

Product: high light inducible protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 49; Mature: 48

Protein sequence:

>49_residues
MPISDFLKETINDCMTNKAESLNGRIAMVGMLALMVTYLATGDIIPGVF

Sequences:

>Translated_49_residues
MPISDFLKETINDCMTNKAESLNGRIAMVGMLALMVTYLATGDIIPGVF
>Mature_48_residues
PISDFLKETINDCMTNKAESLNGRIAMVGMLALMVTYLATGDIIPGVF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 5307; Mature: 5176

Theoretical pI: Translated: 4.23; Mature: 4.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
10.2 %Met     (Translated Protein)
12.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
8.3 %Met     (Mature Protein)
10.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPISDFLKETINDCMTNKAESLNGRIAMVGMLALMVTYLATGDIIPGVF
CCHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
PISDFLKETINDCMTNKAESLNGRIAMVGMLALMVTYLATGDIIPGVF
CHHHHHHHHHHHHHCCHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA