| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863196
Identifier: 33863196
GI number: 33863196
Start: 1006805
End: 1007785
Strand: Reverse
Name: 33863196
Synonym: PMT0924
Alternate gene names: NA
Gene position: 1007785-1006805 (Counterclockwise)
Preceding gene: 33863197
Following gene: 33863195
Centisome position: 41.8
GC content: 49.13
Gene sequence:
>981_bases GTGTTGCGTTCCCTTCGTCTTTCTTTATCCGTAGCTAGTGCTGCTGCTCTTGCCTTAGCCAGCACTCCCATCCATCCAGT CGCTGCTCAAGAAGAAGACGGCAGTGCAGCAGATCTAGGTGTCATGGAGATCAACCTCAAAGACGCTGTGCAGTTCAACT GGGGTTTTCAAGGTGCATTGCAAGGAGCAGGTACACCCAATCAAGCTGGTATTGGCGCCTTTCTTCCCATTGCCGTTGGT GAGAACAGCGTTTGGTTTATCGATGCTCTAGCCAATGCCAACTTCTCTGATCGAGATGGTGAAAGCAGCATCGTTAATAC CGATGTTGCTGGTACCACGATCAGCACTTCAACAAGGCTTGGCTATCGCTGGCTCAACGGAGACCGCAGCTGGATGTACG GCATCAATGCTGGCTATGACAGCCGGCCGATGAATACAGGTGATGCTGATACCAGCGTCAATGTTATTGACAAGCGTGAT GTCTTCTTCTCTCAAGTTGCTGCAGGGTTAGAAGCAGTCTCAGACACTTGGAACTTCAATGCTTATGCACTGGTTCCCAT TGGTGATGTCGAACACAGGCTGAACAGCCATTACGACGGTGGTGCTCTTGGTACCTACGGCTTAGATGTCGGCTACAGCA TCACACCAGATCTCAATGCTTCTGTTGGTTATTACTATCAGCAAGGAGATCTCGGTGATGCTGATGGTTCTGGTGTTAAA GGAAGACTGGCATACAACATCAGCAATGGTTTAACTCTTGGCGCCAATCTTTCTTACGATGAAGCCTTTGATACACGCTT TACGGCAGACATTAAATATCGTTTTGGCAGCAATGGCTATGGAGCACCAAGCAAGAGTGAACCAGCAGTGATGCCTGCGA TTCAAGCGTTATTTACAACACCAGCCAATCGGGATGTAAGGGTGCATGACGGCTGGGTATCTGCGGTGGTTGGGTGTTAT TATGAGCCCTCGTTTTGTTGA
Upstream 100 bases:
>100_bases TCCCGAAACTTTCGCTGCCAACCAAGCGACTGCCTCACGCTCTGCGCTGAAACTCAGATTTCAAAGCATCATGAACTGAA CTTTTAAGTCTTTGAGCCCA
Downstream 100 bases:
>100_bases CGGCCGAGATGCCCCCTAACCCCCTGCGATTATAGGGTCTTTTTATTTCTTCAACGACTTCCCTATTCGCTTAAAACGGC ATCCGATACCTGGCACGAGC
Product: carbamoyl-phosphate synthase L chain
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 326; Mature: 326
Protein sequence:
>326_residues MLRSLRLSLSVASAAALALASTPIHPVAAQEEDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFSDRDGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGINAGYDSRPMNTGDADTSVNVIDKRD VFFSQVAAGLEAVSDTWNFNAYALVPIGDVEHRLNSHYDGGALGTYGLDVGYSITPDLNASVGYYYQQGDLGDADGSGVK GRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKSEPAVMPAIQALFTTPANRDVRVHDGWVSAVVGCY YEPSFC
Sequences:
>Translated_326_residues MLRSLRLSLSVASAAALALASTPIHPVAAQEEDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFSDRDGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGINAGYDSRPMNTGDADTSVNVIDKRD VFFSQVAAGLEAVSDTWNFNAYALVPIGDVEHRLNSHYDGGALGTYGLDVGYSITPDLNASVGYYYQQGDLGDADGSGVK GRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKSEPAVMPAIQALFTTPANRDVRVHDGWVSAVVGCY YEPSFC >Mature_326_residues MLRSLRLSLSVASAAALALASTPIHPVAAQEEDGSAADLGVMEINLKDAVQFNWGFQGALQGAGTPNQAGIGAFLPIAVG ENSVWFIDALANANFSDRDGESSIVNTDVAGTTISTSTRLGYRWLNGDRSWMYGINAGYDSRPMNTGDADTSVNVIDKRD VFFSQVAAGLEAVSDTWNFNAYALVPIGDVEHRLNSHYDGGALGTYGLDVGYSITPDLNASVGYYYQQGDLGDADGSGVK GRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKSEPAVMPAIQALFTTPANRDVRVHDGWVSAVVGCY YEPSFC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34628; Mature: 34628
Theoretical pI: Translated: 4.21; Mature: 4.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLRSLRLSLSVASAAALALASTPIHPVAAQEEDGSAADLGVMEINLKDAVQFNWGFQGAL CCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHEEEECCCCCEEE QGAGTPNQAGIGAFLPIAVGENSVWFIDALANANFSDRDGESSIVNTDVAGTTISTSTRL CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEECCCCC GYRWLNGDRSWMYGINAGYDSRPMNTGDADTSVNVIDKRDVFFSQVAAGLEAVSDTWNFN EEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC AYALVPIGDVEHRLNSHYDGGALGTYGLDVGYSITPDLNASVGYYYQQGDLGDADGSGVK CEEEEEECCHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCCEEEEECCCCCCCCCCCCC GRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKSEPAVMPAIQALFTT EEEEEEECCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC PANRDVRVHDGWVSAVVGCYYEPSFC CCCCCEEEECCHHHHHHHHCCCCCCC >Mature Secondary Structure MLRSLRLSLSVASAAALALASTPIHPVAAQEEDGSAADLGVMEINLKDAVQFNWGFQGAL CCCEEEEEEEHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEHHHEEEECCCCCEEE QGAGTPNQAGIGAFLPIAVGENSVWFIDALANANFSDRDGESSIVNTDVAGTTISTSTRL CCCCCCCCCCCCEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEECCCCCCEEECCCCC GYRWLNGDRSWMYGINAGYDSRPMNTGDADTSVNVIDKRDVFFSQVAAGLEAVSDTWNFN EEEEECCCCCEEEEECCCCCCCCCCCCCCCCEEEEEECCHHHHHHHHHHHHHHHCCCCCC AYALVPIGDVEHRLNSHYDGGALGTYGLDVGYSITPDLNASVGYYYQQGDLGDADGSGVK CEEEEEECCHHHHHHCCCCCCCEEEEEECCCCEECCCCCCCCEEEEECCCCCCCCCCCCC GRLAYNISNGLTLGANLSYDEAFDTRFTADIKYRFGSNGYGAPSKSEPAVMPAIQALFTT EEEEEEECCCEEECCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCC PANRDVRVHDGWVSAVVGCYYEPSFC CCCCCEEEECCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA