| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863190
Identifier: 33863190
GI number: 33863190
Start: 1001058
End: 1001939
Strand: Reverse
Name: 33863190
Synonym: PMT0918
Alternate gene names: NA
Gene position: 1001939-1001058 (Counterclockwise)
Preceding gene: 33863194
Following gene: 33863189
Centisome position: 41.56
GC content: 45.8
Gene sequence:
>882_bases ATGGTTATTGGTGTTTTAGCCGCGCTTTCTGGATCTCTTGCTTGGACATTAAGTAGTAGTCTTTGGCGCTCAATCGATAC GTCATTAACTGCCTGGCAATTAAATGGTCTTAAGATCGTCATTGCCACATTATTTTTGTGCCCTGTACTTCTATTCTTGC CATGGTCTGAGCAGACCAATGGCTTGATGTTATTGATGGCCAGTGGTGCATTAGGTATTGCATTGGGAGATAGCTTCTAC TTCGCTGCTCTGCGACGACTTGGAACACGAAGAACATTGACGATCGAAGCGATAGGACCACTTTTGGCGAGCTTTTACGG AATGACATTTTTAGCTGAGACGATAAATTTGAGGTCTTGGCTTGGAGCAATCCTTGTTACCACATCAGTCGTCATTGCAG CCTTTCAACAGCCACCCGAAAAGCGAGTGGGTTTCAATCAACAGTTCTCGTCTCAACGTTTGGGGCTACTCTTTGCTCTC TCTGGTGTGATTTGCGGCGTTAGTGGTGCCGCACTTTCACGACAAGTACTCCTTCTAGGCCAGATCACACCTTTACAAAG TGCTGCCATTCGCTTACTAGGTGGATTATTGCTCATTATTCCTTGGCTTCGAAAACGCATTCGATCAGTTCCTTATCCAC GTCCGTCACAAGTCCGTTGGCCCAGGATTCTGTTTGCAACATTGTTGGGAACCAACCTTGGGATTATTTTGCAACAGCTA GCTCTGCAAAAGCTTCCCTTAGGGATTGGGGTGACATTACTGAGCAGCTCACCTGTAATGGCTTTGCTTCTTTGCCGCTA TGAAGGCGATAGCCTAAGGATTGGAGGAATAGCTGCATCTTTTATGGCAGTTTTTGGAATTTGGCTTGCAGTAACTAGCT AA
Upstream 100 bases:
>100_bases CCGATTCCAACATGGGGGTTGCCATCACCTAGCCCCAATAGGAATCTCTAGCCTACAGAGAAGTTGTGATTTTACTTCTC TATTCTGATGAAATCATTCA
Downstream 100 bases:
>100_bases ATACAAAAAACTTTAACTCTATTAAATAGAATCCTATGATTTTGTCAACCAACTCAGGCTCGCCACGGCATTAACCATTA TTTAAGAGAGCGTGGCCATC
Product: integral membrane protein, DUF6
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 293; Mature: 293
Protein sequence:
>293_residues MVIGVLAALSGSLAWTLSSSLWRSIDTSLTAWQLNGLKIVIATLFLCPVLLFLPWSEQTNGLMLLMASGALGIALGDSFY FAALRRLGTRRTLTIEAIGPLLASFYGMTFLAETINLRSWLGAILVTTSVVIAAFQQPPEKRVGFNQQFSSQRLGLLFAL SGVICGVSGAALSRQVLLLGQITPLQSAAIRLLGGLLLIIPWLRKRIRSVPYPRPSQVRWPRILFATLLGTNLGIILQQL ALQKLPLGIGVTLLSSSPVMALLLCRYEGDSLRIGGIAASFMAVFGIWLAVTS
Sequences:
>Translated_293_residues MVIGVLAALSGSLAWTLSSSLWRSIDTSLTAWQLNGLKIVIATLFLCPVLLFLPWSEQTNGLMLLMASGALGIALGDSFY FAALRRLGTRRTLTIEAIGPLLASFYGMTFLAETINLRSWLGAILVTTSVVIAAFQQPPEKRVGFNQQFSSQRLGLLFAL SGVICGVSGAALSRQVLLLGQITPLQSAAIRLLGGLLLIIPWLRKRIRSVPYPRPSQVRWPRILFATLLGTNLGIILQQL ALQKLPLGIGVTLLSSSPVMALLLCRYEGDSLRIGGIAASFMAVFGIWLAVTS >Mature_293_residues MVIGVLAALSGSLAWTLSSSLWRSIDTSLTAWQLNGLKIVIATLFLCPVLLFLPWSEQTNGLMLLMASGALGIALGDSFY FAALRRLGTRRTLTIEAIGPLLASFYGMTFLAETINLRSWLGAILVTTSVVIAAFQQPPEKRVGFNQQFSSQRLGLLFAL SGVICGVSGAALSRQVLLLGQITPLQSAAIRLLGGLLLIIPWLRKRIRSVPYPRPSQVRWPRILFATLLGTNLGIILQQL ALQKLPLGIGVTLLSSSPVMALLLCRYEGDSLRIGGIAASFMAVFGIWLAVTS
Specific function: Unknown
COG id: COG0697
COG function: function code GER; Permeases of the drug/metabolite transporter (DMT) superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31564; Mature: 31564
Theoretical pI: Translated: 11.71; Mature: 11.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVIGVLAALSGSLAWTLSSSLWRSIDTSLTAWQLNGLKIVIATLFLCPVLLFLPWSEQTN CCEEEEHHHCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCC GLMLLMASGALGIALGDSFYFAALRRLGTRRTLTIEAIGPLLASFYGMTFLAETINLRSW CEEEEEECCCEEEEECCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LGAILVTTSVVIAAFQQPPEKRVGFNQQFSSQRLGLLFALSGVICGVSGAALSRQVLLLG HHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEE QITPLQSAAIRLLGGLLLIIPWLRKRIRSVPYPRPSQVRWPRILFATLLGTNLGIILQQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH ALQKLPLGIGVTLLSSSPVMALLLCRYEGDSLRIGGIAASFMAVFGIWLAVTS HHHHCCCCCCEEEECCCCHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MVIGVLAALSGSLAWTLSSSLWRSIDTSLTAWQLNGLKIVIATLFLCPVLLFLPWSEQTN CCEEEEHHHCCCHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCCC GLMLLMASGALGIALGDSFYFAALRRLGTRRTLTIEAIGPLLASFYGMTFLAETINLRSW CEEEEEECCCEEEEECCHHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHH LGAILVTTSVVIAAFQQPPEKRVGFNQQFSSQRLGLLFALSGVICGVSGAALSRQVLLLG HHHHHHHHHHHHHHHCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHEEE QITPLQSAAIRLLGGLLLIIPWLRKRIRSVPYPRPSQVRWPRILFATLLGTNLGIILQQL CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHH ALQKLPLGIGVTLLSSSPVMALLLCRYEGDSLRIGGIAASFMAVFGIWLAVTS HHHHCCCCCCEEEECCCCHHHHHEEEECCCCEEEHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA