| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863189
Identifier: 33863189
GI number: 33863189
Start: 999206
End: 999520
Strand: Reverse
Name: 33863189
Synonym: PMT0917
Alternate gene names: NA
Gene position: 999520-999206 (Counterclockwise)
Preceding gene: 33863190
Following gene: 33863188
Centisome position: 41.46
GC content: 41.59
Gene sequence:
>315_bases ATGGCTCTGGAGGCCCTGATGGACTCTCTCTCTTCTATGGATGTTTTGGGATTAATAGCTGGAACACTAACCACAATTGC TTTTGTTCCTCAATTAGTAAAGGTTTGGCGTTCTAAATCAGCAAAAGACATCTCTTACGTGATGTTCATTCTTTTCATAG CCGGCATCATCCTATGGGAAATATATGGCTGGGGCATACATTCTATGCCAGTAATCCTGTTCAATGTGATCACCTTCATA CTAGGACTGGCAATCCTAATTCTTAAGTTTGTCTTTGACAGGCCAGCTAGCGAGGCAACGGAGATATCAAAATAA
Upstream 100 bases:
>100_bases CAACGGCTATACGAATGCTGACCTCATTGGTTGTCTTGATGTAGCGATCACGTCAGGCCACTGCAATAGAGTCTGTAAGG CTTAGCCAAAAATTATCCTT
Downstream 100 bases:
>100_bases GATTCGGGAATAATGAGTTCACTCATTAATTAGTTTTCACTGGAAAGATAAACCCAATAACAGTTCAATGGCTATAATAT GCTCGTAAAAGTGTTTAGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 104; Mature: 103
Protein sequence:
>104_residues MALEALMDSLSSMDVLGLIAGTLTTIAFVPQLVKVWRSKSAKDISYVMFILFIAGIILWEIYGWGIHSMPVILFNVITFI LGLAILILKFVFDRPASEATEISK
Sequences:
>Translated_104_residues MALEALMDSLSSMDVLGLIAGTLTTIAFVPQLVKVWRSKSAKDISYVMFILFIAGIILWEIYGWGIHSMPVILFNVITFI LGLAILILKFVFDRPASEATEISK >Mature_103_residues ALEALMDSLSSMDVLGLIAGTLTTIAFVPQLVKVWRSKSAKDISYVMFILFIAGIILWEIYGWGIHSMPVILFNVITFIL GLAILILKFVFDRPASEATEISK
Specific function: Unknown
COG id: COG4095
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11536; Mature: 11405
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MALEALMDSLSSMDVLGLIAGTLTTIAFVPQLVKVWRSKSAKDISYVMFILFIAGIILWE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IYGWGIHSMPVILFNVITFILGLAILILKFVFDRPASEATEISK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC >Mature Secondary Structure ALEALMDSLSSMDVLGLIAGTLTTIAFVPQLVKVWRSKSAKDISYVMFILFIAGIILWE CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH IYGWGIHSMPVILFNVITFILGLAILILKFVFDRPASEATEISK HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA