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The map label for this gene is 33863175

Identifier: 33863175

GI number: 33863175

Start: 984485

End: 986140

Strand: Reverse

Name: 33863175

Synonym: PMT0903

Alternate gene names: NA

Gene position: 986140-984485 (Counterclockwise)

Preceding gene: 33863177

Following gene: 33863172

Centisome position: 40.9

GC content: 52.72

Gene sequence:

>1656_bases
GTGATTCAGCACCCTTATGAGGTGATCGTGATCGGCTCTGGTGCTACTGGAGGGGTTGCGGCTCTAACCCTTGCAGAAGC
TGGCGTACGTGTACTCGTGGTAGAAGCTGGGCCAGATTTGTCTGCTCAAAAAGCCCTGGGCTCAGAACCTGGAAACACCC
TTAGACGTTTGGATGGTTTATGTAGCGGCAAGCATCGATCTCAGGCTCAACATCCTGGCTATTGGAAAGCGAATCCGTTG
CTCTACGCGAATGAAAAAGAGAATCCCTATACCTATCCTTCTGAACACCCCTTCATCTGGACCCAGGGTCATCAGGTGGG
GGGGCGCAGCCTCACTTGGGGTGGAATCACTCTTCGCCTTTCAGATCAGGACTTAAAGGCTTCGCGCAGAGATGGGTATG
GGCCTGAATGGCCACTGCAATACAGCGAGTTAGCCCCTCATTACTCCGCCCTAGAAGAGCGCTTGAAGGTTCATGGTCAT
GTGGATGGGTTGGAACAGTTACCGGATGGCAACTACATCGACCCATTACCGTTCACAGCTAGCGAACAACAGTTCGCTAG
CGCTGTTGATACGGAACTTGGTTATCCAGTCATTCATTCACGAGGGTTCGGACCTCACCAGCCTTCAGTTGATGGACCTT
GGCCTCGTTCAAGCAGTCCGGGCAGCACCTTACAGATGGCACTTGCTACAGGCAAGGTAGAGATCCTGAGCAACCACAAG
GCTGAGCGGTTGCTGATGCATCCAGATCATGAAGCAGCCCGAGGGGTGCTGGTGATTGATCAGCACAACGGCAACCGACA
AGAGCTCCATGGTGAGCTTGTGGTGCTTTGTGCATCGACAATTCAGAGTCTTCGACTCCTGCTGAGTTCCGAAGTGAACC
ATCACAGCGAGGGGTTTACTGACCCCTCGGGCAACCTCGGTTGCTATTTGATGGACCACGTCTCCACCTGTCGTTTCTTT
GCTCTGCCACGTAGCCAAGTGAAGCAGGTGTCTGAGACTGACTCAACAGCGAATGTGCTTTCTGGAGCTGGCAGTTTTTT
TCTTCCTTTCGGTGCTTGCTTAGAGCCTAAAAATCAGTTGAAGTTCTTGCGGGGTTATGGACTCTGGGGAGGGATTGATC
GCTTTGAACCCCCAGATTGGTTGAAACGTAAACCAGAGACGGCTACAGGTTTCCTGATTGGGCATGGTGAAGTGTTGCCT
TCACCTCACAACAAAGTGACGCTTTCAAGCACTTTGGATCGCTGGGGTGTTCCGGTACCACATATCGATTGTCGATGGGG
GGAGAATGAGCAGGCCATGGTTGATCACATGCAAGGCACGATCAAGGCAGCGATCCAGTCAGCTGGGGGAACAATGTTGC
CGCTCAAGGAGCTGATTAATTTGATGTTTCTCGAACCCCTTCTCGATGGTGCGCTAGCTCTCAGTGAAACGTCTCCACCG
CCGGGGTATTACATCCATGAAGTTGGCGGTGCTGCGATGGGAGAAAGTGAAGATTGCAGTGTGGTGGATCGTTGGAACCG
TCTTTGGCGATGTCCAAATGTGCTTGTTGTGGATGGAGCGTGTTGGCCAACATCCGCCTGGCAGAGTCCCACTCTGACAA
TGATGGCGATTACAAGAAGGGCTTGTCTAGAGGCCCTTAGGCCTCGGCGTGGCTAA

Upstream 100 bases:

>100_bases
TCCATTCTCCAAGGCATCAAGTCAACGCGCAGGTCTGTGAGATCCAGATGGTATCTATGCACGTGAGGGGCGAAACTGTC
TTGATGTTGTCTATGCAAGC

Downstream 100 bases:

>100_bases
AAAGGTCATTGAGATACCGCTCAGTAACGGCTCGATCCCCGCAGCCGTTTTGAAACAGGAAATGGGCGATGGCTGAACTC
ATCACACGGTATTGGTCCCA

Product: glucose-methanol-choline (GMC) oxidoreductase:NAD binding site

Products: NA

Alternate protein names: Oxidoreductase; Choline Dehydrogenase; GMC Family Oxidoreductase; GMC Oxidoreductase Family Protein; Oxidoreductase Protein; Dehydrogenase Subunit-Like Protein; Gluconate 2-Dehydrogenase; Oxidoreductase GMC Family; Glucoside 3-Dehydrogenase; Oxidoreductase-Like Protein; Fad Dependent Oxidoreductase; Choline Dehydrogenase And Flavoproteins-Like Protein; 2-Keto-Gluconate Dehydrogenase; Dehydrogluconate Dehydrogenase; Glucase Dehydrogenase Subunit Alpha; GMC Oxidoreductase; Choline Dehydrogenase-Like Flavoprotein; Glucose-Methanol-Choline Family Oxidoreductase; Oxidoreductase Chain; GMC Oxidoreductase Family; Oxidoreductase GMC Family Protein; Gluconate 2-Dehydrogenase Alpha Chain

Number of amino acids: Translated: 551; Mature: 551

Protein sequence:

>551_residues
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGLCSGKHRSQAQHPGYWKANPL
LYANEKENPYTYPSEHPFIWTQGHQVGGRSLTWGGITLRLSDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGH
VDGLEQLPDGNYIDPLPFTASEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
AERLLMHPDHEAARGVLVIDQHNGNRQELHGELVVLCASTIQSLRLLLSSEVNHHSEGFTDPSGNLGCYLMDHVSTCRFF
ALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQLKFLRGYGLWGGIDRFEPPDWLKRKPETATGFLIGHGEVLP
SPHNKVTLSSTLDRWGVPVPHIDCRWGENEQAMVDHMQGTIKAAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
PGYYIHEVGGAAMGESEDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRRACLEALRPRRG

Sequences:

>Translated_551_residues
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGLCSGKHRSQAQHPGYWKANPL
LYANEKENPYTYPSEHPFIWTQGHQVGGRSLTWGGITLRLSDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGH
VDGLEQLPDGNYIDPLPFTASEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
AERLLMHPDHEAARGVLVIDQHNGNRQELHGELVVLCASTIQSLRLLLSSEVNHHSEGFTDPSGNLGCYLMDHVSTCRFF
ALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQLKFLRGYGLWGGIDRFEPPDWLKRKPETATGFLIGHGEVLP
SPHNKVTLSSTLDRWGVPVPHIDCRWGENEQAMVDHMQGTIKAAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
PGYYIHEVGGAAMGESEDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRRACLEALRPRRG
>Mature_551_residues
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGLCSGKHRSQAQHPGYWKANPL
LYANEKENPYTYPSEHPFIWTQGHQVGGRSLTWGGITLRLSDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGH
VDGLEQLPDGNYIDPLPFTASEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
AERLLMHPDHEAARGVLVIDQHNGNRQELHGELVVLCASTIQSLRLLLSSEVNHHSEGFTDPSGNLGCYLMDHVSTCRFF
ALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQLKFLRGYGLWGGIDRFEPPDWLKRKPETATGFLIGHGEVLP
SPHNKVTLSSTLDRWGVPVPHIDCRWGENEQAMVDHMQGTIKAAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
PGYYIHEVGGAAMGESEDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRRACLEALRPRRG

Specific function: Unknown

COG id: COG2303

COG function: function code E; Choline dehydrogenase and related flavoproteins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60275; Mature: 60275

Theoretical pI: Translated: 6.40; Mature: 6.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGL
CCCCCEEEEEEECCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHH
CSGKHRSQAQHPGYWKANPLLYANEKENPYTYPSEHPFIWTQGHQVGGRSLTWGGITLRL
HCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGHVDGLEQLPDGNYIDPLPFTA
CCCHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCC
SEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
CHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCC
AERLLMHPDHEAARGVLVIDQHNGNRQELHGELVVLCASTIQSLRLLLSSEVNHHSEGFT
CCEEEECCCHHHHCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPSGNLGCYLMDHVSTCRFFALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQL
CCCCCCCEEEEHHHCCHHEEECCHHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCHHHH
KFLRGYGLWGGIDRFEPPDWLKRKPETATGFLIGHGEVLPSPHNKVTLSSTLDRWGVPVP
HHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHCCCCC
HIDCRWGENEQAMVDHMQGTIKAAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC
PGYYIHEVGGAAMGESEDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRR
CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
ACLEALRPRRG
HHHHHHCCCCC
>Mature Secondary Structure
MIQHPYEVIVIGSGATGGVAALTLAEAGVRVLVVEAGPDLSAQKALGSEPGNTLRRLDGL
CCCCCEEEEEEECCCCCCHHHHHHHHCCEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHH
CSGKHRSQAQHPGYWKANPLLYANEKENPYTYPSEHPFIWTQGHQVGGRSLTWGGITLRL
HCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEECCCCCCCCEEEECCEEEEE
SDQDLKASRRDGYGPEWPLQYSELAPHYSALEERLKVHGHVDGLEQLPDGNYIDPLPFTA
CCCHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHHCCCCCHHHCCCCCCCCCCCCCC
SEQQFASAVDTELGYPVIHSRGFGPHQPSVDGPWPRSSSPGSTLQMALATGKVEILSNHK
CHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCEEEEECCCC
AERLLMHPDHEAARGVLVIDQHNGNRQELHGELVVLCASTIQSLRLLLSSEVNHHSEGFT
CCEEEECCCHHHHCCEEEEECCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DPSGNLGCYLMDHVSTCRFFALPRSQVKQVSETDSTANVLSGAGSFFLPFGACLEPKNQL
CCCCCCCEEEEHHHCCHHEEECCHHHHHHHHHCCHHHHHHHCCCCEEECCCCCCCCHHHH
KFLRGYGLWGGIDRFEPPDWLKRKPETATGFLIGHGEVLPSPHNKVTLSSTLDRWGVPVP
HHHHHCCCCCCCCCCCCCHHHHCCCCCCEEEEEECCCCCCCCCCCEEEHHHHHHHCCCCC
HIDCRWGENEQAMVDHMQGTIKAAIQSAGGTMLPLKELINLMFLEPLLDGALALSETSPP
CEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHEEECCCCCC
PGYYIHEVGGAAMGESEDCSVVDRWNRLWRCPNVLVVDGACWPTSAWQSPTLTMMAITRR
CCEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCHHHHHHHH
ACLEALRPRRG
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA