| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863172
Identifier: 33863172
GI number: 33863172
Start: 981293
End: 982498
Strand: Reverse
Name: 33863172
Synonym: PMT0900
Alternate gene names: NA
Gene position: 982498-981293 (Counterclockwise)
Preceding gene: 33863175
Following gene: 33863171
Centisome position: 40.75
GC content: 53.23
Gene sequence:
>1206_bases GTGGATGACATTCCTGCGCTGATGCGCTCGCTACAGCTCAAACGTAAACCCTTAATGGTTTGCAGCGGAGGCACAACCAG TCGCTGTGCAGCTGAAGGACACTGGACTCTGGATCTGCGCCAAAGCTGTCGCCAGATCCATTTCGATCCCAGCACCCAAC ACGTGGAGATTGGGGCTGGTCAGACAATGGAGAGTCTTCTCAGGGAACTCGCCAAGCACGGACGAAGTTTTCCCACAGGG CTATCAGGGCTGCCAGGCCTCGGTTACATCCTCAATGGAGGCATCAGCCCTTTGAGTCGCAGTCAAGGATTAGCAATTGA TCAAATCCTTGAGATCAAAGGTGTATGGGGCGATGGAGAAAGCTTTGTTCTCTCCAAGCCGGAAGCTGCTTGCTGCTCTG AAGATCAATTGGCTTGGCGTGGCCTCTGCGGAGCAGCTCCTTTTCTGGCTGTGATCACAGACCTGAAGCTTCAGACACAT CTGCTGCAACCGCTGCGTATCTGGCAATCAAATTTGACGTTTGAACAGCTGTTGGAGCTTATCCATCAGGCTGAAAGCTG GCCTGATTCGTTAAGCCTGCAGTGGATCTGGGGGGATGAAGTCCACGCTTACGGAGTGCTTCTTTCTGCCGATGCTGCCG CTGTTGCGACATTCAATCAGCTGCAAAAAACAACTCTCTGCACAAACGTTGTTGAAATTGACGATGTTGCTGGCATACAT GAATTGCCACCATTTGCATTGCCTGTTGTTTCGAACGCAGCGATTGGGCGTTGCCACTCTGAAGTCGTTGCATTGCTTGG CCCTGCTTGGGGGTCTGGCTGTCAGGGAGTGATCACGGCCCTTGCCGAACTGATGGCAGAACGCCCAGATCCAAGGTGTT CCTTGGCTGTTCAACAACTCGGCGGAGTCGCCAGTCGGCAACGCAAGGATGTCAGTTCTTTGATTCACCGTGAGGCGATC TGGAAACCATGGATCACGGCAGCCTGGCCGGCTGGAGATAGCCATATCAGAGCGCTAAGTCTCAACTGGCTAGAGAAGGT ATGGGCAACGCTTGAGCCTTATTGCGCAGGAGTTCATCTGGCTCAGATGCATCCGCATCTGCCATGGCATCAGCGGGAGC TGAAAGCAGCATTCGGCGAATGGTTACCAGGTCTTCAAGAACTTAAGGCTCGTCATGACCCAAACGGTATTTTGCCGTCG CTTTGA
Upstream 100 bases:
>100_bases GCTGATCAATGAGGGTTAAGAGGCCGCCATTCATCGTCGCCTCCATGTTCCAAACGCACTTGCAGAGGATGCTTGCATCG CAGGAGTCTTCAATCCCAAA
Downstream 100 bases:
>100_bases GATAAGGTCTGCCGTCAAAGCCAGCCTTTTTAATGATTAACCGGTCAGAACCATCGTTGATCAAACAGTGGTTAGGCAAC CCTCCAAAAGATCTCCTCTC
Product: FAD linked oxidase, N-terminal
Products: NA
Alternate protein names: FAD Linked Oxidase N-Terminal Domain Protein; Oxidoreductase; FAD/FMN-Containing Dehydrogenase; Oxidase
Number of amino acids: Translated: 401; Mature: 401
Protein sequence:
>401_residues MDDIPALMRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAGQTMESLLRELAKHGRSFPTG LSGLPGLGYILNGGISPLSRSQGLAIDQILEIKGVWGDGESFVLSKPEAACCSEDQLAWRGLCGAAPFLAVITDLKLQTH LLQPLRIWQSNLTFEQLLELIHQAESWPDSLSLQWIWGDEVHAYGVLLSADAAAVATFNQLQKTTLCTNVVEIDDVAGIH ELPPFALPVVSNAAIGRCHSEVVALLGPAWGSGCQGVITALAELMAERPDPRCSLAVQQLGGVASRQRKDVSSLIHREAI WKPWITAAWPAGDSHIRALSLNWLEKVWATLEPYCAGVHLAQMHPHLPWHQRELKAAFGEWLPGLQELKARHDPNGILPS L
Sequences:
>Translated_401_residues MDDIPALMRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAGQTMESLLRELAKHGRSFPTG LSGLPGLGYILNGGISPLSRSQGLAIDQILEIKGVWGDGESFVLSKPEAACCSEDQLAWRGLCGAAPFLAVITDLKLQTH LLQPLRIWQSNLTFEQLLELIHQAESWPDSLSLQWIWGDEVHAYGVLLSADAAAVATFNQLQKTTLCTNVVEIDDVAGIH ELPPFALPVVSNAAIGRCHSEVVALLGPAWGSGCQGVITALAELMAERPDPRCSLAVQQLGGVASRQRKDVSSLIHREAI WKPWITAAWPAGDSHIRALSLNWLEKVWATLEPYCAGVHLAQMHPHLPWHQRELKAAFGEWLPGLQELKARHDPNGILPS L >Mature_401_residues MDDIPALMRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAGQTMESLLRELAKHGRSFPTG LSGLPGLGYILNGGISPLSRSQGLAIDQILEIKGVWGDGESFVLSKPEAACCSEDQLAWRGLCGAAPFLAVITDLKLQTH LLQPLRIWQSNLTFEQLLELIHQAESWPDSLSLQWIWGDEVHAYGVLLSADAAAVATFNQLQKTTLCTNVVEIDDVAGIH ELPPFALPVVSNAAIGRCHSEVVALLGPAWGSGCQGVITALAELMAERPDPRCSLAVQQLGGVASRQRKDVSSLIHREAI WKPWITAAWPAGDSHIRALSLNWLEKVWATLEPYCAGVHLAQMHPHLPWHQRELKAAFGEWLPGLQELKARHDPNGILPS L
Specific function: Unknown
COG id: COG0277
COG function: function code C; FAD/FMN-containing dehydrogenases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43838; Mature: 43838
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDDIPALMRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAG CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCEEECCCC QTMESLLRELAKHGRSFPTGLSGLPGLGYILNGGISPLSRSQGLAIDQILEIKGVWGDGE HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC SFVLSKPEAACCSEDQLAWRGLCGAAPFLAVITDLKLQTHLLQPLRIWQSNLTFEQLLEL CEEEECCCHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IHQAESWPDSLSLQWIWGDEVHAYGVLLSADAAAVATFNQLQKTTLCTNVVEIDDVAGIH HHHHCCCCCCCEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ELPPFALPVVSNAAIGRCHSEVVALLGPAWGSGCQGVITALAELMAERPDPRCSLAVQQL HCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH GGVASRQRKDVSSLIHREAIWKPWITAAWPAGDSHIRALSLNWLEKVWATLEPYCAGVHL CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCH AQMHPHLPWHQRELKAAFGEWLPGLQELKARHDPNGILPSL HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC >Mature Secondary Structure MDDIPALMRSLQLKRKPLMVCSGGTTSRCAAEGHWTLDLRQSCRQIHFDPSTQHVEIGAG CCCHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCEEEHHHHHHHHCCCCCCCCEEECCCC QTMESLLRELAKHGRSFPTGLSGLPGLGYILNGGISPLSRSQGLAIDQILEIKGVWGDGE HHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCCCC SFVLSKPEAACCSEDQLAWRGLCGAAPFLAVITDLKLQTHLLQPLRIWQSNLTFEQLLEL CEEEECCCHHCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH IHQAESWPDSLSLQWIWGDEVHAYGVLLSADAAAVATFNQLQKTTLCTNVVEIDDVAGIH HHHHCCCCCCCEEEEEECCCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHCCHH ELPPFALPVVSNAAIGRCHSEVVALLGPAWGSGCQGVITALAELMAERPDPRCSLAVQQL HCCCCHHHHHCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHH GGVASRQRKDVSSLIHREAIWKPWITAAWPAGDSHIRALSLNWLEKVWATLEPYCAGVHL CCHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHCCCCH AQMHPHLPWHQRELKAAFGEWLPGLQELKARHDPNGILPSL HHHCCCCCHHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA