Click here to switch to the map view.

The map label for this gene is 33863170

Identifier: 33863170

GI number: 33863170

Start: 978958

End: 979356

Strand: Reverse

Name: 33863170

Synonym: PMT0898

Alternate gene names: NA

Gene position: 979356-978958 (Counterclockwise)

Preceding gene: 33863171

Following gene: 33863169

Centisome position: 40.62

GC content: 47.62

Gene sequence:

>399_bases
ATGCTTTTCATGGCGAACTTCGATGCTTCTACGCCCTTTCTTCTTCTGGCTCGCATCCATGTAAAACCAGGCTGTGTTGA
TGATTATCTTTCATTGGCTGCGACGACAGATGCAGGGGTTAAGGATTCTGAGCCTGGGATGTTGCATCACACCTTTGATC
AGGATCCAGACGATCCCCTCGCTTTTGTTTGGTCTGAGGTCTATGCAAATGATGCGGCCTTTTTGGCTCATCTATCAAAC
CCCATCGTTGGTGACTATCTCGCTAAGCATGCAGAACTTGGTGATGGTTTTAGTGTTGAGGTCTACGGCACCATTGGCGC
TGAGTGTCGAGCTGCAATGGCAGCAACTGGATTACCCCTAAAAATCTTCGAGACAAGATGTGGATACAGTCGTTTCTAA

Upstream 100 bases:

>100_bases
AATCATTAGTTTGATTTGCTGCTGAAAAAATGATGCCTTGGTTCATTTTGAAATTCTCTCACACACCTGCTTAGGGCTGC
TATAACTCTTAAGCTCACCA

Downstream 100 bases:

>100_bases
GTTTTGTCTGATCGCTTTCTGTTGCGATACAATTGGCATTACAGAAAAAATCATACGCGCATATTAAGTGATCAGCATGA
GAGCTATTTTTAGCATTTAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MLFMANFDASTPFLLLARIHVKPGCVDDYLSLAATTDAGVKDSEPGMLHHTFDQDPDDPLAFVWSEVYANDAAFLAHLSN
PIVGDYLAKHAELGDGFSVEVYGTIGAECRAAMAATGLPLKIFETRCGYSRF

Sequences:

>Translated_132_residues
MLFMANFDASTPFLLLARIHVKPGCVDDYLSLAATTDAGVKDSEPGMLHHTFDQDPDDPLAFVWSEVYANDAAFLAHLSN
PIVGDYLAKHAELGDGFSVEVYGTIGAECRAAMAATGLPLKIFETRCGYSRF
>Mature_132_residues
MLFMANFDASTPFLLLARIHVKPGCVDDYLSLAATTDAGVKDSEPGMLHHTFDQDPDDPLAFVWSEVYANDAAFLAHLSN
PIVGDYLAKHAELGDGFSVEVYGTIGAECRAAMAATGLPLKIFETRCGYSRF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14305; Mature: 14305

Theoretical pI: Translated: 4.40; Mature: 4.40

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLFMANFDASTPFLLLARIHVKPGCVDDYLSLAATTDAGVKDSEPGMLHHTFDQDPDDPL
CEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHH
AFVWSEVYANDAAFLAHLSNPIVGDYLAKHAELGDGFSVEVYGTIGAECRAAMAATGLPL
HHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCE
KIFETRCGYSRF
EEEECCCCCCCC
>Mature Secondary Structure
MLFMANFDASTPFLLLARIHVKPGCVDDYLSLAATTDAGVKDSEPGMLHHTFDQDPDDPL
CEEEECCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHH
AFVWSEVYANDAAFLAHLSNPIVGDYLAKHAELGDGFSVEVYGTIGAECRAAMAATGLPL
HHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHCCCCE
KIFETRCGYSRF
EEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA