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The map label for this gene is F21B7.35 [H]

Identifier: 33863143

GI number: 33863143

Start: 954227

End: 955282

Strand: Direct

Name: F21B7.35 [H]

Synonym: PMT0871

Alternate gene names: 33863143

Gene position: 954227-955282 (Clockwise)

Preceding gene: 33863142

Following gene: 33863144

Centisome position: 39.58

GC content: 51.04

Gene sequence:

>1056_bases
GTGCAAACCATGACCAAAGCCCCCTCGTCAACAGTCCAAAGCCGCCGAATCCTGCTCACAGGAGCAAGTTCTGGAATCGG
CTATCAAGCTGCAGTTCGAATGCATCGTGCCGGGCATCAGCTAATTCTGCCTTGTCGAGATCGTTCTACAGCCACGGCAA
CGCTTAAAAAGCTCTCAGAAGAGACAGCTCAACATCAGCAAGAGAGAAGCCCAGTTTCAGCTCCAGTCATGGACTTAGCT
GATTTGGAAAGCATCAAACATTGTGCTGATGAGCTATTGAGAATCGGCCAACCAATCGATACCTTGATCCTAAATGCTGG
CCTTCAATACACTGGTGCAGCAAAAGCGCAGCTCTCATCTCAGGGCTACGAACTCACCATCGCAGTGAATCATCTTGGTC
ATCAGGCCTTGAGCATCCGCCTATTACCGCTGTTAGATGAAGGGAGGAGCCCACGTGTAGTGGTAACAGCTTCCGAGGTG
CATGACTCCAATTCTCCTGGCGGACGCTTTGGCAAGCCTTCTGGCTTAGGTGATTTGACGGGTCTCAAAACCGGAGCCGG
CTTTGAGATGATTGATGGCAGTTCAAACTTTAATGCAGACAAGGCCTACAAGGACAGCAAGCTTTGCAACGTACTGTTCG
CTCGGGAATTGGCAAGACGACTGAGTTTGCGTTCCACACAGATACCAGTGCTGGCATGGGCACCAGGGCTAGTGATACCT
CGCAGCTCAGGAGGCTTCTTTCGATACAGTCGGCGCTACAACGAATGGGGTCAGCGGGTCTTTTCACTAGTGGTGCGAGA
TCTGTTGCGCATTAGCGAATCAACAGAGAATGCGGGGTCTCTACTGTCGAGACTTGCGACAGATCAATCGTTAAGCACAT
CTCCATTTAGCTATCGAAGCAATCGGCTTGACGGTCCAGGGAAGCACCGTTTTGAAGAAGCAAATGTAAGTAAGGAAGCA
CAGGACAACAATCTGGCCAAGTCGCTCTGGGAAGTGAGCGCCGAGCTGATAGGACTACCTACTGAGCTACCACCTGCCTC
AGTATCACAATGCTAA

Upstream 100 bases:

>100_bases
TCTGAACGCAAAGGATGGTGCGACGAATTCAATTCAGCTCGTAGCAGCGTTGAAGGCCATCCCCTAGAAGCGAGGCAACA
AGCACCATCTTCTGCATAGG

Downstream 100 bases:

>100_bases
GCTTTGTTCAAGAGGACCTAATTAACTGTATATATAGGCCCTGAATTATCAAAAAGCAGAAGCAACAACATGCAGCATGT
ATCTCAAATCCATAGTCAAA

Product: short-chain dehydrogenase/reductase

Products: NA

Alternate protein names: PCR; NADPH-protochlorophyllide oxidoreductase; LPOR; POR [H]

Number of amino acids: Translated: 351; Mature: 351

Protein sequence:

>351_residues
MQTMTKAPSSTVQSRRILLTGASSGIGYQAAVRMHRAGHQLILPCRDRSTATATLKKLSEETAQHQQERSPVSAPVMDLA
DLESIKHCADELLRIGQPIDTLILNAGLQYTGAAKAQLSSQGYELTIAVNHLGHQALSIRLLPLLDEGRSPRVVVTASEV
HDSNSPGGRFGKPSGLGDLTGLKTGAGFEMIDGSSNFNADKAYKDSKLCNVLFARELARRLSLRSTQIPVLAWAPGLVIP
RSSGGFFRYSRRYNEWGQRVFSLVVRDLLRISESTENAGSLLSRLATDQSLSTSPFSYRSNRLDGPGKHRFEEANVSKEA
QDNNLAKSLWEVSAELIGLPTELPPASVSQC

Sequences:

>Translated_351_residues
MQTMTKAPSSTVQSRRILLTGASSGIGYQAAVRMHRAGHQLILPCRDRSTATATLKKLSEETAQHQQERSPVSAPVMDLA
DLESIKHCADELLRIGQPIDTLILNAGLQYTGAAKAQLSSQGYELTIAVNHLGHQALSIRLLPLLDEGRSPRVVVTASEV
HDSNSPGGRFGKPSGLGDLTGLKTGAGFEMIDGSSNFNADKAYKDSKLCNVLFARELARRLSLRSTQIPVLAWAPGLVIP
RSSGGFFRYSRRYNEWGQRVFSLVVRDLLRISESTENAGSLLSRLATDQSLSTSPFSYRSNRLDGPGKHRFEEANVSKEA
QDNNLAKSLWEVSAELIGLPTELPPASVSQC
>Mature_351_residues
MQTMTKAPSSTVQSRRILLTGASSGIGYQAAVRMHRAGHQLILPCRDRSTATATLKKLSEETAQHQQERSPVSAPVMDLA
DLESIKHCADELLRIGQPIDTLILNAGLQYTGAAKAQLSSQGYELTIAVNHLGHQALSIRLLPLLDEGRSPRVVVTASEV
HDSNSPGGRFGKPSGLGDLTGLKTGAGFEMIDGSSNFNADKAYKDSKLCNVLFARELARRLSLRSTQIPVLAWAPGLVIP
RSSGGFFRYSRRYNEWGQRVFSLVVRDLLRISESTENAGSLLSRLATDQSLSTSPFSYRSNRLDGPGKHRFEEANVSKEA
QDNNLAKSLWEVSAELIGLPTELPPASVSQC

Specific function: Phototransformation of protochlorophyllide (Pchlide) to chlorophyllide (Chlide) [H]

COG id: COG1028

COG function: function code IQR; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family. POR subfamily [H]

Homologues:

Organism=Homo sapiens, GI7706523, Length=325, Percent_Identity=29.2307692307692, Blast_Score=105, Evalue=5e-23,
Organism=Homo sapiens, GI166795268, Length=339, Percent_Identity=28.3185840707965, Blast_Score=102, Evalue=4e-22,
Organism=Homo sapiens, GI225579078, Length=333, Percent_Identity=29.4294294294294, Blast_Score=98, Evalue=1e-20,
Organism=Homo sapiens, GI10190746, Length=339, Percent_Identity=28.3185840707965, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI186928839, Length=327, Percent_Identity=29.0519877675841, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI146231950, Length=341, Percent_Identity=29.6187683284457, Blast_Score=79, Evalue=5e-15,
Organism=Homo sapiens, GI193804850, Length=332, Percent_Identity=26.2048192771084, Blast_Score=72, Evalue=6e-13,
Organism=Caenorhabditis elegans, GI17505416, Length=230, Percent_Identity=28.695652173913, Blast_Score=80, Evalue=2e-15,
Organism=Caenorhabditis elegans, GI17532805, Length=327, Percent_Identity=27.82874617737, Blast_Score=78, Evalue=8e-15,
Organism=Caenorhabditis elegans, GI17558006, Length=222, Percent_Identity=24.7747747747748, Blast_Score=72, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI17532791, Length=205, Percent_Identity=27.3170731707317, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI20129347, Length=333, Percent_Identity=29.1291291291291, Blast_Score=109, Evalue=3e-24,
Organism=Drosophila melanogaster, GI45553409, Length=227, Percent_Identity=30.3964757709251, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24647948, Length=227, Percent_Identity=30.3964757709251, Blast_Score=98, Evalue=9e-21,
Organism=Drosophila melanogaster, GI24647946, Length=229, Percent_Identity=29.6943231441048, Blast_Score=97, Evalue=1e-20,
Organism=Drosophila melanogaster, GI28573296, Length=325, Percent_Identity=28.6153846153846, Blast_Score=87, Evalue=1e-17,
Organism=Drosophila melanogaster, GI22024069, Length=326, Percent_Identity=27.6073619631902, Blast_Score=86, Evalue=4e-17,
Organism=Drosophila melanogaster, GI161076371, Length=220, Percent_Identity=28.6363636363636, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI24586328, Length=235, Percent_Identity=31.9148936170213, Blast_Score=80, Evalue=3e-15,
Organism=Drosophila melanogaster, GI19921754, Length=222, Percent_Identity=28.3783783783784, Blast_Score=75, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24647931, Length=337, Percent_Identity=27.299703264095, Blast_Score=72, Evalue=5e-13,
Organism=Drosophila melanogaster, GI45554248, Length=227, Percent_Identity=26.8722466960352, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24640117, Length=227, Percent_Identity=26.8722466960352, Blast_Score=67, Evalue=2e-11,
Organism=Drosophila melanogaster, GI24656154, Length=228, Percent_Identity=26.7543859649123, Blast_Score=65, Evalue=9e-11,
Organism=Drosophila melanogaster, GI19922628, Length=228, Percent_Identity=26.7543859649123, Blast_Score=65, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR005979 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: =1.3.1.33 [H]

Molecular weight: Translated: 38125; Mature: 38125

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQTMTKAPSSTVQSRRILLTGASSGIGYQAAVRMHRAGHQLILPCRDRSTATATLKKLSE
CCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
ETAQHQQERSPVSAPVMDLADLESIKHCADELLRIGQPIDTLILNAGLQYTGAAKAQLSS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHCC
QGYELTIAVNHLGHQALSIRLLPLLDEGRSPRVVVTASEVHDSNSPGGRFGKPSGLGDLT
CCEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCC
GLKTGAGFEMIDGSSNFNADKAYKDSKLCNVLFARELARRLSLRSTQIPVLAWAPGLVIP
CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEE
RSSGGFFRYSRRYNEWGQRVFSLVVRDLLRISESTENAGSLLSRLATDQSLSTSPFSYRS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
NRLDGPGKHRFEEANVSKEAQDNNLAKSLWEVSAELIGLPTELPPASVSQC
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MQTMTKAPSSTVQSRRILLTGASSGIGYQAAVRMHRAGHQLILPCRDRSTATATLKKLSE
CCCCCCCCCHHHCCCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHH
ETAQHQQERSPVSAPVMDLADLESIKHCADELLRIGQPIDTLILNAGLQYTGAAKAQLSS
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCCCCCHHHHHCC
QGYELTIAVNHLGHQALSIRLLPLLDEGRSPRVVVTASEVHDSNSPGGRFGKPSGLGDLT
CCEEEEEEEECCCCCEEEEEEEEECCCCCCCEEEEEEHHCCCCCCCCCCCCCCCCCCCCC
GLKTGAGFEMIDGSSNFNADKAYKDSKLCNVLFARELARRLSLRSTQIPVLAWAPGLVIP
CCCCCCCCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEE
RSSGGFFRYSRRYNEWGQRVFSLVVRDLLRISESTENAGSLLSRLATDQSLSTSPFSYRS
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCC
NRLDGPGKHRFEEANVSKEAQDNNLAKSLWEVSAELIGLPTELPPASVSQC
CCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9559561 [H]