| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33863137
Identifier: 33863137
GI number: 33863137
Start: 946491
End: 949247
Strand: Reverse
Name: 33863137
Synonym: PMT0865
Alternate gene names: NA
Gene position: 949247-946491 (Counterclockwise)
Preceding gene: 33863138
Following gene: 33863135
Centisome position: 39.37
GC content: 46.35
Gene sequence:
>2757_bases ATGCGCTTATTGCACTGCCATCTTGAAAATATTCGCCGTCATCGGTTCTTGGATCTCGACTTTTCGCCCGGATTGACGTT GATTTCTGGAGCCAATGAAAGCGGGAAAAGCTCACTTGTGGAGGCGATGCATCGAGGCTTATTTCTCAAGGCTACTGCTA GCGGATCGCTAGTAGAAGCGTTGCGCTCTAATCTTTTTCCAGGTCACCCCCTCATTGAACTTTCTTTTGAAGCCAAAGGT GCGATCTGGTCGTTGAGCAAACGCTTTAGTGGTCAGAGTGGCAGCGTAAGGCTTGATGGAACCGGGCAAGAAGTTCCACT CAGCGGTTCTGCGGCAGAAGAGCTCCTAGCAAAACTTCTCGGAGTTGATGAGATCGTTGGCAGTCGTCAGGCAGCGCGAG TCCTTCCGAGTCGATGGGCTCATCTCTGGGTGTTACAGGGACTCGCTGGCCAGAATCTTTTAGATCAAGGACCCCAGCAT TACGACCTCAATGGGTTGATGCAGCAATTGGAGCAACGGGCAGAAGTGTCTTTGCAATCATCTCTTGATCAAAAGGTGAG TACGGAGCTGGAGGCTCTTGTGGAAGCCACTTTCACGAGTCGAGGGGTTCGTCGTAACTCACTTCTTTGGCAATGTCAGC AACAACGAGAGAGAGCGGAAGATGCTCTTAAAACTGCAGAACTGCAACGGGACAGCTTTGAATCCACCAGTGCAGAGTTG GATCAACTTGAACATGAGCTTGATTTGCTCACGTCAGACCGCAAACCTGCCCTCAAGAAGCGACGTTTCGAGTTGCAAAC GCAACAGGAGCAGACCCGCCAGGACGAAGCTGCTCTGCTCCTTTATCGACAGCAGCTCGAACCTCTTCAACTGCGAAAGA AACAACTGCAAAGCGTCCTTCATGCTAATAATCAAATCCACAATGAATTTCTCCTCTGCCAGAAGAATCTTGAGGATGGC AGTGAGCAGCAGACTCTGCTTAAGCACAGCCTTAGTGAGACCAAAAAGCAGATTGAGACCACACAGCAAAAGCTCAATGA TCTGGATCAACAACGATCGGACTGGGAATTAAGGGGTCTGCAAATGAGACGGTTAGAAGAACTCACACAGCTCAAGCTTC AACGCGAATCCCTCCAACGACAGCACAACGAGCAACAACGCTTGCGCAAACAATCCCAAACACTGCAAATTCAACTCGAT GCACTGCCTGATCTTGGTGTGGCTAAGTTGCAGCGTCTTCGTGATTGTTATGACCAAGTCAAAGCATGTGCTATTCGCAT TGAAACGATGGCATCTGAATTCAATCTAGAACGTGCAGATCAGCCTGTAATTGTCGATGGTTTTCCCCTGAAGGAGGGTC AGAAGAAACGCCTTACATCAAGCTTCACCGTGAATGTTGGTGATGGAGTGTGCTTTCATATTAATCCTGGCCAAGGTACG GGAATTGAAGAACTAAAACGTGACCATGAGAGGAATCTTCTGAAGTACACGGAGACCCTGAAGGCTTGGCAAGTGAAATC TTTGGAGGAAGCCGAACAAAAGATTAATCACAGGAATCAGTTGAGTCAGCAATTGAATCTTGTCAACGAACAACTCAATG GATGTCAAGATGGACATGATGGAAATATAAGTCTATCTCTACAGAGAAAACAACTGCAAAATCGTCAGGAAGAACTTGAA CAAGAGATGACCTCAGAATCAGAACTTTCAAAGCTAGATGATAGTTTATTCTCCAATGATGGAAGCTTGAATCAACTTCT TGATCTCGATACCATCCGCGTTGAGCTTAAGCGATATCGTCAGAGCTACAGAACCATTAGTGAGTCAATTAAGGTGATCA AGTTGCGACTTCAGCAGCTGCATAGAGAAGAGTATGAGCAAGACAAGAACTTACAGAAGCTTACACTTTCGATTGAGGTG TTAAGTGCAAAACAAATCGAACGAAAACAACATATGAAATCTCTTTTGGCTGAACATGGTCCTGAACCAGAGATTGAGGA AAAACTACTTAAACTTAATCAATCACTGACTCATTTGGGACAGAAGGTTTCTGATTTGGAACAACAGCTCGGAAAACAAA CTCTACAAGCCATCAAGTCAGCTCTTGCAGAGCTGGATGCCCAAGAAAAACGTTTGCAGGAACATTTACAGCTGCTTAGC GGACAACGAGGAGCTCTGCGTGAACGCTGTGAAGGGCTTGGAAGCCTTGAACCTTATGCTGCTCTTGAGGAAGCCCGCGT AAACTTTAATCAGGCCAAGCTGGAGGAGCGTGAACAATTGATGCTTGCTCATGCACAGCAAAGACTCTTAAAATCATTTC AACAAGCTCAAGCTGAACTATCAAATCGATATACGACTCCACTTAGTCAGGCAATTTGTTCTTACTTAGAGCCCTTGCTT GGTAACGAAAATGATCGTTGTCACCTTAGTTTCGACCCTCATGATGGTTTTCGAGAATTAGGCCTTCGACGTGACGGTCA AAACGTACAATTTCGAGATTTAAGTGGCGGCATGAAGGAACAGCTCAATGGGGCTCTTCGTCTTTCGATCGCAGATGCCC TCAAAGGAGGACATGGCGACTGTTTGCCAATTCTGTTTGATGATGCTTTTACCAATACTGATCCAGATCGCATCGAGACA GTGCTCAGGATGATGACCCAGGCGGTAAAGCGTGGCCTTCAGGTGATTGTGCTCAGTTGCGACCCAACCCCTTACGAAAC AATTGCTGATAAGACTATTTACTTGCCAAGTCCTTAA
Upstream 100 bases:
>100_bases CTTACAACTGAACAGCAGAGCGAAGCCGAGCTGATCGAGTTAGCTCTTTGTGAACTCCATCGGCTTTGCAGTGAGTCATC CTTAAATAACTGACCGCCCT
Downstream 100 bases:
>100_bases TTGACTCAGACTTATAATCTGATAACTAGATCAGCTAGCTTGCTCATGATTCAAATCAATGGATATTTGCTTTCAATTCA GCAGATGTTTTGAAATTACT
Product: RecF protein:ABC transporter
Products: NA
Alternate protein names: SMC Domain-Containing Protein; RecF ProteinABC Transporter; ATPase; RecF/RecN/SMC Domain-Containing Protein; ATPase Involved In DNA Repair-Like
Number of amino acids: Translated: 918; Mature: 918
Protein sequence:
>918_residues MRLLHCHLENIRRHRFLDLDFSPGLTLISGANESGKSSLVEAMHRGLFLKATASGSLVEALRSNLFPGHPLIELSFEAKG AIWSLSKRFSGQSGSVRLDGTGQEVPLSGSAAEELLAKLLGVDEIVGSRQAARVLPSRWAHLWVLQGLAGQNLLDQGPQH YDLNGLMQQLEQRAEVSLQSSLDQKVSTELEALVEATFTSRGVRRNSLLWQCQQQRERAEDALKTAELQRDSFESTSAEL DQLEHELDLLTSDRKPALKKRRFELQTQQEQTRQDEAALLLYRQQLEPLQLRKKQLQSVLHANNQIHNEFLLCQKNLEDG SEQQTLLKHSLSETKKQIETTQQKLNDLDQQRSDWELRGLQMRRLEELTQLKLQRESLQRQHNEQQRLRKQSQTLQIQLD ALPDLGVAKLQRLRDCYDQVKACAIRIETMASEFNLERADQPVIVDGFPLKEGQKKRLTSSFTVNVGDGVCFHINPGQGT GIEELKRDHERNLLKYTETLKAWQVKSLEEAEQKINHRNQLSQQLNLVNEQLNGCQDGHDGNISLSLQRKQLQNRQEELE QEMTSESELSKLDDSLFSNDGSLNQLLDLDTIRVELKRYRQSYRTISESIKVIKLRLQQLHREEYEQDKNLQKLTLSIEV LSAKQIERKQHMKSLLAEHGPEPEIEEKLLKLNQSLTHLGQKVSDLEQQLGKQTLQAIKSALAELDAQEKRLQEHLQLLS GQRGALRERCEGLGSLEPYAALEEARVNFNQAKLEEREQLMLAHAQQRLLKSFQQAQAELSNRYTTPLSQAICSYLEPLL GNENDRCHLSFDPHDGFRELGLRRDGQNVQFRDLSGGMKEQLNGALRLSIADALKGGHGDCLPILFDDAFTNTDPDRIET VLRMMTQAVKRGLQVIVLSCDPTPYETIADKTIYLPSP
Sequences:
>Translated_918_residues MRLLHCHLENIRRHRFLDLDFSPGLTLISGANESGKSSLVEAMHRGLFLKATASGSLVEALRSNLFPGHPLIELSFEAKG AIWSLSKRFSGQSGSVRLDGTGQEVPLSGSAAEELLAKLLGVDEIVGSRQAARVLPSRWAHLWVLQGLAGQNLLDQGPQH YDLNGLMQQLEQRAEVSLQSSLDQKVSTELEALVEATFTSRGVRRNSLLWQCQQQRERAEDALKTAELQRDSFESTSAEL DQLEHELDLLTSDRKPALKKRRFELQTQQEQTRQDEAALLLYRQQLEPLQLRKKQLQSVLHANNQIHNEFLLCQKNLEDG SEQQTLLKHSLSETKKQIETTQQKLNDLDQQRSDWELRGLQMRRLEELTQLKLQRESLQRQHNEQQRLRKQSQTLQIQLD ALPDLGVAKLQRLRDCYDQVKACAIRIETMASEFNLERADQPVIVDGFPLKEGQKKRLTSSFTVNVGDGVCFHINPGQGT GIEELKRDHERNLLKYTETLKAWQVKSLEEAEQKINHRNQLSQQLNLVNEQLNGCQDGHDGNISLSLQRKQLQNRQEELE QEMTSESELSKLDDSLFSNDGSLNQLLDLDTIRVELKRYRQSYRTISESIKVIKLRLQQLHREEYEQDKNLQKLTLSIEV LSAKQIERKQHMKSLLAEHGPEPEIEEKLLKLNQSLTHLGQKVSDLEQQLGKQTLQAIKSALAELDAQEKRLQEHLQLLS GQRGALRERCEGLGSLEPYAALEEARVNFNQAKLEEREQLMLAHAQQRLLKSFQQAQAELSNRYTTPLSQAICSYLEPLL GNENDRCHLSFDPHDGFRELGLRRDGQNVQFRDLSGGMKEQLNGALRLSIADALKGGHGDCLPILFDDAFTNTDPDRIET VLRMMTQAVKRGLQVIVLSCDPTPYETIADKTIYLPSP >Mature_918_residues MRLLHCHLENIRRHRFLDLDFSPGLTLISGANESGKSSLVEAMHRGLFLKATASGSLVEALRSNLFPGHPLIELSFEAKG AIWSLSKRFSGQSGSVRLDGTGQEVPLSGSAAEELLAKLLGVDEIVGSRQAARVLPSRWAHLWVLQGLAGQNLLDQGPQH YDLNGLMQQLEQRAEVSLQSSLDQKVSTELEALVEATFTSRGVRRNSLLWQCQQQRERAEDALKTAELQRDSFESTSAEL DQLEHELDLLTSDRKPALKKRRFELQTQQEQTRQDEAALLLYRQQLEPLQLRKKQLQSVLHANNQIHNEFLLCQKNLEDG SEQQTLLKHSLSETKKQIETTQQKLNDLDQQRSDWELRGLQMRRLEELTQLKLQRESLQRQHNEQQRLRKQSQTLQIQLD ALPDLGVAKLQRLRDCYDQVKACAIRIETMASEFNLERADQPVIVDGFPLKEGQKKRLTSSFTVNVGDGVCFHINPGQGT GIEELKRDHERNLLKYTETLKAWQVKSLEEAEQKINHRNQLSQQLNLVNEQLNGCQDGHDGNISLSLQRKQLQNRQEELE QEMTSESELSKLDDSLFSNDGSLNQLLDLDTIRVELKRYRQSYRTISESIKVIKLRLQQLHREEYEQDKNLQKLTLSIEV LSAKQIERKQHMKSLLAEHGPEPEIEEKLLKLNQSLTHLGQKVSDLEQQLGKQTLQAIKSALAELDAQEKRLQEHLQLLS GQRGALRERCEGLGSLEPYAALEEARVNFNQAKLEEREQLMLAHAQQRLLKSFQQAQAELSNRYTTPLSQAICSYLEPLL GNENDRCHLSFDPHDGFRELGLRRDGQNVQFRDLSGGMKEQLNGALRLSIADALKGGHGDCLPILFDDAFTNTDPDRIET VLRMMTQAVKRGLQVIVLSCDPTPYETIADKTIYLPSP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 104648; Mature: 104648
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLLHCHLENIRRHRFLDLDFSPGLTLISGANESGKSSLVEAMHRGLFLKATASGSLVEA CCEEHHHHHHHHHHHEEECCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHH LRSNLFPGHPLIELSFEAKGAIWSLSKRFSGQSGSVRLDGTGQEVPLSGSAAEELLAKLL HHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH GVDEIVGSRQAARVLPSRWAHLWVLQGLAGQNLLDQGPQHYDLNGLMQQLEQRAEVSLQS CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH SLDQKVSTELEALVEATFTSRGVRRNSLLWQCQQQRERAEDALKTAELQRDSFESTSAEL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQLEHELDLLTSDRKPALKKRRFELQTQQEQTRQDEAALLLYRQQLEPLQLRKKQLQSVL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HANNQIHNEFLLCQKNLEDGSEQQTLLKHSLSETKKQIETTQQKLNDLDQQRSDWELRGL HHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QMRRLEELTQLKLQRESLQRQHNEQQRLRKQSQTLQIQLDALPDLGVAKLQRLRDCYDQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHH KACAIRIETMASEFNLERADQPVIVDGFPLKEGQKKRLTSSFTVNVGDGVCFHINPGQGT HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHCCCCEEEECCCEEEEEECCCCCC GIEELKRDHERNLLKYTETLKAWQVKSLEEAEQKINHRNQLSQQLNLVNEQLNGCQDGHD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GNISLSLQRKQLQNRQEELEQEMTSESELSKLDDSLFSNDGSLNQLLDLDTIRVELKRYR CCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QSYRTISESIKVIKLRLQQLHREEYEQDKNLQKLTLSIEVLSAKQIERKQHMKSLLAEHG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PEPEIEEKLLKLNQSLTHLGQKVSDLEQQLGKQTLQAIKSALAELDAQEKRLQEHLQLLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GQRGALRERCEGLGSLEPYAALEEARVNFNQAKLEEREQLMLAHAQQRLLKSFQQAQAEL CCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNRYTTPLSQAICSYLEPLLGNENDRCHLSFDPHDGFRELGLRRDGQNVQFRDLSGGMKE HHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCCCCCCEEECCCCCHHH QLNGALRLSIADALKGGHGDCLPILFDDAFTNTDPDRIETVLRMMTQAVKRGLQVIVLSC HCCCHHEEEHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC DPTPYETIADKTIYLPSP CCCCCHHHCCCEEECCCC >Mature Secondary Structure MRLLHCHLENIRRHRFLDLDFSPGLTLISGANESGKSSLVEAMHRGLFLKATASGSLVEA CCEEHHHHHHHHHHHEEECCCCCCCEEEECCCCCHHHHHHHHHHCCEEEEECCCCHHHHH LRSNLFPGHPLIELSFEAKGAIWSLSKRFSGQSGSVRLDGTGQEVPLSGSAAEELLAKLL HHHCCCCCCCEEEEEECCCCHHHHHHHHCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHH GVDEIVGSRQAARVLPSRWAHLWVLQGLAGQNLLDQGPQHYDLNGLMQQLEQRAEVSLQS CHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHH SLDQKVSTELEALVEATFTSRGVRRNSLLWQCQQQRERAEDALKTAELQRDSFESTSAEL HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DQLEHELDLLTSDRKPALKKRRFELQTQQEQTRQDEAALLLYRQQLEPLQLRKKQLQSVL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH HANNQIHNEFLLCQKNLEDGSEQQTLLKHSLSETKKQIETTQQKLNDLDQQRSDWELRGL HHCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH QMRRLEELTQLKLQRESLQRQHNEQQRLRKQSQTLQIQLDALPDLGVAKLQRLRDCYDQV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCHHHHHHHHHHHHHH KACAIRIETMASEFNLERADQPVIVDGFPLKEGQKKRLTSSFTVNVGDGVCFHINPGQGT HHHHHHHHHHHHHHCCCCCCCCEEECCCCCCCCCHHHCCCCEEEECCCEEEEEECCCCCC GIEELKRDHERNLLKYTETLKAWQVKSLEEAEQKINHRNQLSQQLNLVNEQLNGCQDGHD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GNISLSLQRKQLQNRQEELEQEMTSESELSKLDDSLFSNDGSLNQLLDLDTIRVELKRYR CCEEEEEHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHH QSYRTISESIKVIKLRLQQLHREEYEQDKNLQKLTLSIEVLSAKQIERKQHMKSLLAEHG HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC PEPEIEEKLLKLNQSLTHLGQKVSDLEQQLGKQTLQAIKSALAELDAQEKRLQEHLQLLS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHC GQRGALRERCEGLGSLEPYAALEEARVNFNQAKLEEREQLMLAHAQQRLLKSFQQAQAEL CCCHHHHHHHHCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SNRYTTPLSQAICSYLEPLLGNENDRCHLSFDPHDGFRELGLRRDGQNVQFRDLSGGMKE HHCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHCCCCCCCCCCEEECCCCCHHH QLNGALRLSIADALKGGHGDCLPILFDDAFTNTDPDRIETVLRMMTQAVKRGLQVIVLSC HCCCHHEEEHHHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEC DPTPYETIADKTIYLPSP CCCCCHHHCCCEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA