| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
Click here to switch to the map view.
The map label for this gene is 33863136
Identifier: 33863136
GI number: 33863136
Start: 944856
End: 946367
Strand: Direct
Name: 33863136
Synonym: PMT0864
Alternate gene names: NA
Gene position: 944856-946367 (Clockwise)
Preceding gene: 33863133
Following gene: 33863139
Centisome position: 39.19
GC content: 45.44
Gene sequence:
>1512_bases ATGAACAACAGTTTTTTCACCAAGTCCCTAAATCCGGAGTTGATTCAAAGCAGAATTAAAGCACTTGAGAATGGCAATGT CGGGTTCTACAGCGTGGGGCTTTATCCAGCCTCACTGGCATACAACTGTGCGATGCAAACTGCTGGTGTCAGCTTATTGC TTGCCCCGCGTCCAGAACGAGAATTACTGGGAGCCTTTCCAGAGGGTTCTTTGGATGGAATGGACGAGGCCCATGTTGCA TCTGTTATCAAGATGGGCACACATGTAAAAGCTGGAGTTCGTGTCACAAACACACTGGCTGATCTAATTGAACGCTGTGA GCTCGTCGTTCTCAGTGCGAACAGCAACCATGTAGAGCTAGACCTTGAGGAAGCTTGTCGACTACGTGAGGAGATGAAAC GAGAACAGGTTGTTCTAGCTTGTCTGGCCGGTTCCTTCTCTCATAACCAGATCAATAATGAATCATATGTCCTATGTGAA AAGCAACCAAATCTAGCGTTCTTCTCAGGATTTCACCGCCATGGAGCATTGCGAAATCCGTTTGATAGCTTCACGGCCAA CTTCTGCCATCCAAATGCACTAACAGCGATGCTTGGAGCTCGAATGCTGGATCGATTGTCACCAAATATCCAGGTATCGT CAGGTGTTCACAATATTGAAGGGCAATATATCAAAGCAGCAAAAAATATGGCTTCAATATTTGCTGGGTTTGGTTATACA TATCACCATGATAATCCAGGCGTACTTCCAACTCTGCTGACCTTACTTTTAGATCAGTGTCTTGATCAAGCTGCCACAGT ATCGATGTGTAGAAATGATCGTCATGGGCTCTACAATCAACAACCATTTTCATTAACTGAGCTTGGTTACGGAGTGCAGC GCATTGAAGCCGCATTGGCTCGAGATGGGGAGATGGAAAAGGTGCGAGACCACACCTTTGCACAACTTACTGCCATGGTT GCAGATGTTAGGGGCAGCATGATGCTTCCGGTTTGTGGCAAACCAACGCGTAACTTTCAAGCTGGGCAAGTACTAGCTAA AAAGATGAAGGAAGAAGAGCGCTGCCCTCATCAAATGGAAGAACTTGAAGAATGGTGTGAATCTGATGGGCTACAAAAGG GAGGGTTAGAAGGCTTGAAGTCTCTGCGTTATTGGCCACAGATTGTTCATAATTACTCTATTCCTCTGCATGATTCATCA ATGGTGAATCTTTTATACATGTCTATCTATGGAAATAAGTCCAGCAAAGGAGTTGCTTATTCTGTGATGACAGAAAGCCG TGAACTCACTAATTACTGCCAGGAATCTGTCAGACCAACCCATAGCCGCAGATATGCCGAAGCTCTTCAAAATCTTGACA ACCCAGAGGCCATAGACCTCATCGTTAATGCAGTGATTGCCGACAATGGGCGTCGTGCAATCCGAGATGATTCATTCCTT AATGGTTCGGAGGCAGTAGACAAGACACCAGCTTATCTCAGAGCGATGAATGTAATCGAGACAAGCCTATAA
Upstream 100 bases:
>100_bases TTTAATATGGTGATATGCAAATTCCCATTTTCCTGAGATCAGCTGCATCCGTAGGGTTAAAGAAGACAACAACAAATCTG CATAGAAGCAAGGAGAAGTG
Downstream 100 bases:
>100_bases GTAGGATTCCCCAGCAGATCACCAGTAATTTCAAAACATCTGCTGAATTGAAAGCAAATATCCATTGATTTGAATCATGA GCAAGCTAGCTGATCTAGTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 503; Mature: 503
Protein sequence:
>503_residues MNNSFFTKSLNPELIQSRIKALENGNVGFYSVGLYPASLAYNCAMQTAGVSLLLAPRPERELLGAFPEGSLDGMDEAHVA SVIKMGTHVKAGVRVTNTLADLIERCELVVLSANSNHVELDLEEACRLREEMKREQVVLACLAGSFSHNQINNESYVLCE KQPNLAFFSGFHRHGALRNPFDSFTANFCHPNALTAMLGARMLDRLSPNIQVSSGVHNIEGQYIKAAKNMASIFAGFGYT YHHDNPGVLPTLLTLLLDQCLDQAATVSMCRNDRHGLYNQQPFSLTELGYGVQRIEAALARDGEMEKVRDHTFAQLTAMV ADVRGSMMLPVCGKPTRNFQAGQVLAKKMKEEERCPHQMEELEEWCESDGLQKGGLEGLKSLRYWPQIVHNYSIPLHDSS MVNLLYMSIYGNKSSKGVAYSVMTESRELTNYCQESVRPTHSRRYAEALQNLDNPEAIDLIVNAVIADNGRRAIRDDSFL NGSEAVDKTPAYLRAMNVIETSL
Sequences:
>Translated_503_residues MNNSFFTKSLNPELIQSRIKALENGNVGFYSVGLYPASLAYNCAMQTAGVSLLLAPRPERELLGAFPEGSLDGMDEAHVA SVIKMGTHVKAGVRVTNTLADLIERCELVVLSANSNHVELDLEEACRLREEMKREQVVLACLAGSFSHNQINNESYVLCE KQPNLAFFSGFHRHGALRNPFDSFTANFCHPNALTAMLGARMLDRLSPNIQVSSGVHNIEGQYIKAAKNMASIFAGFGYT YHHDNPGVLPTLLTLLLDQCLDQAATVSMCRNDRHGLYNQQPFSLTELGYGVQRIEAALARDGEMEKVRDHTFAQLTAMV ADVRGSMMLPVCGKPTRNFQAGQVLAKKMKEEERCPHQMEELEEWCESDGLQKGGLEGLKSLRYWPQIVHNYSIPLHDSS MVNLLYMSIYGNKSSKGVAYSVMTESRELTNYCQESVRPTHSRRYAEALQNLDNPEAIDLIVNAVIADNGRRAIRDDSFL NGSEAVDKTPAYLRAMNVIETSL >Mature_503_residues MNNSFFTKSLNPELIQSRIKALENGNVGFYSVGLYPASLAYNCAMQTAGVSLLLAPRPERELLGAFPEGSLDGMDEAHVA SVIKMGTHVKAGVRVTNTLADLIERCELVVLSANSNHVELDLEEACRLREEMKREQVVLACLAGSFSHNQINNESYVLCE KQPNLAFFSGFHRHGALRNPFDSFTANFCHPNALTAMLGARMLDRLSPNIQVSSGVHNIEGQYIKAAKNMASIFAGFGYT YHHDNPGVLPTLLTLLLDQCLDQAATVSMCRNDRHGLYNQQPFSLTELGYGVQRIEAALARDGEMEKVRDHTFAQLTAMV ADVRGSMMLPVCGKPTRNFQAGQVLAKKMKEEERCPHQMEELEEWCESDGLQKGGLEGLKSLRYWPQIVHNYSIPLHDSS MVNLLYMSIYGNKSSKGVAYSVMTESRELTNYCQESVRPTHSRRYAEALQNLDNPEAIDLIVNAVIADNGRRAIRDDSFL NGSEAVDKTPAYLRAMNVIETSL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 55863; Mature: 55863
Theoretical pI: Translated: 6.20; Mature: 6.20
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 6.2 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNSFFTKSLNPELIQSRIKALENGNVGFYSVGLYPASLAYNCAMQTAGVSLLLAPRPER CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEEEECCCCCH ELLGAFPEGSLDGMDEAHVASVIKMGTHVKAGVRVTNTLADLIERCELVVLSANSNHVEL HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCEEEEECCCCEEEE DLEEACRLREEMKREQVVLACLAGSFSHNQINNESYVLCEKQPNLAFFSGFHRHGALRNP EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHCHHHCCCCCCC FDSFTANFCHPNALTAMLGARMLDRLSPNIQVSSGVHNIEGQYIKAAKNMASIFAGFGYT HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCEE YHHDNPGVLPTLLTLLLDQCLDQAATVSMCRNDRHGLYNQQPFSLTELGYGVQRIEAALA EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHH RDGEMEKVRDHTFAQLTAMVADVRGSMMLPVCGKPTRNFQAGQVLAKKMKEEERCPHQME CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHH ELEEWCESDGLQKGGLEGLKSLRYWPQIVHNYSIPLHDSSMVNLLYMSIYGNKSSKGVAY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCCCCCCEEE SVMTESRELTNYCQESVRPTHSRRYAEALQNLDNPEAIDLIVNAVIADNGRRAIRDDSFL EEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC NGSEAVDKTPAYLRAMNVIETSL CCCHHHCCCHHHHHHHHHHHHCC >Mature Secondary Structure MNNSFFTKSLNPELIQSRIKALENGNVGFYSVGLYPASLAYNCAMQTAGVSLLLAPRPER CCCCCCCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHCCCEEEECCCCCH ELLGAFPEGSLDGMDEAHVASVIKMGTHVKAGVRVTNTLADLIERCELVVLSANSNHVEL HHHCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHCCEEEEECCCCEEEE DLEEACRLREEMKREQVVLACLAGSFSHNQINNESYVLCEKQPNLAFFSGFHRHGALRNP EHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHCHHHCCCCCCC FDSFTANFCHPNALTAMLGARMLDRLSPNIQVSSGVHNIEGQYIKAAKNMASIFAGFGYT HHHHHCCCCCHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCHHHHHHHHHHHHHHHCCEE YHHDNPGVLPTLLTLLLDQCLDQAATVSMCRNDRHGLYNQQPFSLTELGYGVQRIEAALA EECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHCCHHHHHHHHH RDGEMEKVRDHTFAQLTAMVADVRGSMMLPVCGKPTRNFQAGQVLAKKMKEEERCPHQME CCCCHHHHHHHHHHHHHHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHHHHHCCCHHHH ELEEWCESDGLQKGGLEGLKSLRYWPQIVHNYSIPLHDSSMVNLLYMSIYGNKSSKGVAY HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHEEEEEEECCCCCCCEEE SVMTESRELTNYCQESVRPTHSRRYAEALQNLDNPEAIDLIVNAVIADNGRRAIRDDSFL EEHHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCCCCCCCCCCC NGSEAVDKTPAYLRAMNVIETSL CCCHHHCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA