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The map label for this gene is ykuT [H]

Identifier: 33863126

GI number: 33863126

Start: 933805

End: 935781

Strand: Reverse

Name: ykuT [H]

Synonym: PMT0854

Alternate gene names: 33863126

Gene position: 935781-933805 (Counterclockwise)

Preceding gene: 33863127

Following gene: 33863124

Centisome position: 38.82

GC content: 41.38

Gene sequence:

>1977_bases
TTGCTAATGCAACTACCTTCCAAAAAAAAATTAGCTTTACGTTGGTTGGTATGTCTTTTTTGTGGCTTACTGATCAGTCT
GCTTTTTTTTCCTGCTTTTGCACAGATCTCGTTCGGGTCAACTGCAACTCCTATCAGTAACCCGATGAACCGACCTGTCT
GGGACCTTAATAGACCTTGGCGTTGTGGACGCCTTTACTGCAGCAGAGTTGTTTTTCCTGTTCGAATTCTTAGCCAGAAC
AATCGCCTCACTCTTGCTGCGCAGGCTTTAAATAATATCAGTCCACAGCAGGCAGCTCAGAACATTGAATTGCGAGCTCA
ATCTGTACAGTTAACTGTTAAATCTGTCAAAAATCGCCTTGTTAGTTTTTGGCGAGAGACCCAGTTGTCTGGTAAGACTT
CTACCTATAGTATACAACAAATCTATGATCCACGCTTCTGGTGGTTCTTACATCAGAAACCTATACATCCTCTTACTCCT
GCAGTGCAGATCGGCACCCAAAATAAAGCCACAGTTATCTATTTGCCAGACAATCCAAAGTATCGTCTTTTTAAACAGAC
AGTAATTACTGTAACTGCTCCAGATGCTCAGCATGCAGGCATTGAGATCCCTCAGTTGGCGCAAGAGTGGCAGGAGAGAA
TAAGAATTAATTTTAGTGATCAACTGTGGGGCCTGGAATTTTCCTCCTCCTTTCCTGGATTACGTGTTTTCCTTTCTTTG
AGCTTATTGTTAACTGGTACTTTAGGTTTGCTTCTTCTCAAGACTATACGAGCTTCATTGCTCTCCATAAATTGTCGTTT
ATTGCATAAGCAGGAATCACTTGCAGAATCTTTTAAAGACGATGTCATGGCTGCTTATTCGGGCAACCTTATGCCGCTTT
CCAGTAAAGACGGATATGTTAAAGAAATCGATTCACTTGAACATTCTATGGATTCATCTGTCGTCGATAATGTCAATGAG
TCTGCAAAGCAACACCCTAATCAATCGATCGACAATCTTCCTCGATCCGCTGCTTATACTCACTCTTTATTGAACCAGAC
CCAGAACTTCTTAGAACTCGTTCTATTAGCAAGTAATTTCCTTCGAATCGCATTTTCAGTCTTAGTCTTGCTTTCTGCTA
CTGCTATTTTTCCTTCAATGCGTATATACGCATTTATTGCCCTGCAGCAGTCGATTGCGATTCCTTTGATTTGGCTAGGT
ATCTTTATTTTTCGGCTTTTGGTTGTCATTATCATTGATTTTAATATTAATAATTGGATAAGGCGGGTTTCTAGCAGGGA
TGTTAGTTCGATGCGCTATACCCTTAGGGCAAGTACATACTCTAAGGTTCTTAAAGGTGGAGCAACCGTAGTCACTATCT
TTCTAGGTATCTTTTTGACTTTAACAACAATAGGAGTCGACCGGTCTATTTTTACCAGTGCTGGGGTTATTGCTGTGGGC
GTGGGTTTTCTTTCTCGAAATGTGCTGGAGGATATTCTTAACGGATTTCTTATCTTGGCTAGTGATCGTTTTGCAATAGG
TGATGTAGTTACAATCGGCACCTTTAGTGGCTTTGTTGAAAATATGAATTTATTCAACACTCAACTTCGTGGTTCTGATG
GTCAACTAACAACTCTGCCTAATAGCCAGATTCGAACCGTAGAGAACCTTACTAAGGATTGGTCTCGAGTTAACTTTGAG
ATCAAGGTATCAGCTCGCGAGAATCTTCGCCATGTGCTCGATGTGGTTCGGCTTGTAGCCAATACCATGAGAGATGATAA
GCAATGGAGTGGTTATTTTCTTGATGCTCCCGAGATCCTTGGGATTGATCAGGTGCAATCATCAGGTTGTTTAATCCGTG
TTTGGATTAAAACTCAACCCCTCGCCCAGTGGAGTTTAGGTCGTGAGTTTAGGTTGCAGATTAAAGAAGCTTTTGACCGG
GAGGGAATTACACTTGGTGCTCCTATTCAAAATGTGTTATTTTCTCGTCAAAAATGA

Upstream 100 bases:

>100_bases
TGTTTAACAGATAATGCTTATGGATCAAACTTTTCTTGTTTTTGCTGGCTATCGACCAGCAGCTCATTTACTCTAGCTAG
AATCCTTAGATGTATAAGAA

Downstream 100 bases:

>100_bases
TTAACTTTAACTAAATCATATAAATTCTTCATCGAAGTAATGTTCAGTCAGTTGTAGCATATTCAGATGCAATGGTCTGA
TTCTTCTTGAAATATTTAAT

Product: MscS family mechanosensitive ion channel

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 658; Mature: 658

Protein sequence:

>658_residues
MLMQLPSKKKLALRWLVCLFCGLLISLLFFPAFAQISFGSTATPISNPMNRPVWDLNRPWRCGRLYCSRVVFPVRILSQN
NRLTLAAQALNNISPQQAAQNIELRAQSVQLTVKSVKNRLVSFWRETQLSGKTSTYSIQQIYDPRFWWFLHQKPIHPLTP
AVQIGTQNKATVIYLPDNPKYRLFKQTVITVTAPDAQHAGIEIPQLAQEWQERIRINFSDQLWGLEFSSSFPGLRVFLSL
SLLLTGTLGLLLLKTIRASLLSINCRLLHKQESLAESFKDDVMAAYSGNLMPLSSKDGYVKEIDSLEHSMDSSVVDNVNE
SAKQHPNQSIDNLPRSAAYTHSLLNQTQNFLELVLLASNFLRIAFSVLVLLSATAIFPSMRIYAFIALQQSIAIPLIWLG
IFIFRLLVVIIIDFNINNWIRRVSSRDVSSMRYTLRASTYSKVLKGGATVVTIFLGIFLTLTTIGVDRSIFTSAGVIAVG
VGFLSRNVLEDILNGFLILASDRFAIGDVVTIGTFSGFVENMNLFNTQLRGSDGQLTTLPNSQIRTVENLTKDWSRVNFE
IKVSARENLRHVLDVVRLVANTMRDDKQWSGYFLDAPEILGIDQVQSSGCLIRVWIKTQPLAQWSLGREFRLQIKEAFDR
EGITLGAPIQNVLFSRQK

Sequences:

>Translated_658_residues
MLMQLPSKKKLALRWLVCLFCGLLISLLFFPAFAQISFGSTATPISNPMNRPVWDLNRPWRCGRLYCSRVVFPVRILSQN
NRLTLAAQALNNISPQQAAQNIELRAQSVQLTVKSVKNRLVSFWRETQLSGKTSTYSIQQIYDPRFWWFLHQKPIHPLTP
AVQIGTQNKATVIYLPDNPKYRLFKQTVITVTAPDAQHAGIEIPQLAQEWQERIRINFSDQLWGLEFSSSFPGLRVFLSL
SLLLTGTLGLLLLKTIRASLLSINCRLLHKQESLAESFKDDVMAAYSGNLMPLSSKDGYVKEIDSLEHSMDSSVVDNVNE
SAKQHPNQSIDNLPRSAAYTHSLLNQTQNFLELVLLASNFLRIAFSVLVLLSATAIFPSMRIYAFIALQQSIAIPLIWLG
IFIFRLLVVIIIDFNINNWIRRVSSRDVSSMRYTLRASTYSKVLKGGATVVTIFLGIFLTLTTIGVDRSIFTSAGVIAVG
VGFLSRNVLEDILNGFLILASDRFAIGDVVTIGTFSGFVENMNLFNTQLRGSDGQLTTLPNSQIRTVENLTKDWSRVNFE
IKVSARENLRHVLDVVRLVANTMRDDKQWSGYFLDAPEILGIDQVQSSGCLIRVWIKTQPLAQWSLGREFRLQIKEAFDR
EGITLGAPIQNVLFSRQK
>Mature_658_residues
MLMQLPSKKKLALRWLVCLFCGLLISLLFFPAFAQISFGSTATPISNPMNRPVWDLNRPWRCGRLYCSRVVFPVRILSQN
NRLTLAAQALNNISPQQAAQNIELRAQSVQLTVKSVKNRLVSFWRETQLSGKTSTYSIQQIYDPRFWWFLHQKPIHPLTP
AVQIGTQNKATVIYLPDNPKYRLFKQTVITVTAPDAQHAGIEIPQLAQEWQERIRINFSDQLWGLEFSSSFPGLRVFLSL
SLLLTGTLGLLLLKTIRASLLSINCRLLHKQESLAESFKDDVMAAYSGNLMPLSSKDGYVKEIDSLEHSMDSSVVDNVNE
SAKQHPNQSIDNLPRSAAYTHSLLNQTQNFLELVLLASNFLRIAFSVLVLLSATAIFPSMRIYAFIALQQSIAIPLIWLG
IFIFRLLVVIIIDFNINNWIRRVSSRDVSSMRYTLRASTYSKVLKGGATVVTIFLGIFLTLTTIGVDRSIFTSAGVIAVG
VGFLSRNVLEDILNGFLILASDRFAIGDVVTIGTFSGFVENMNLFNTQLRGSDGQLTTLPNSQIRTVENLTKDWSRVNFE
IKVSARENLRHVLDVVRLVANTMRDDKQWSGYFLDAPEILGIDQVQSSGCLIRVWIKTQPLAQWSLGREFRLQIKEAFDR
EGITLGAPIQNVLFSRQK

Specific function: May play a role in resistance to osmotic downshock [H]

COG id: COG0668

COG function: function code M; Small-conductance mechanosensitive channel

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mscS (TC 1.A.23) family [H]

Homologues:

Organism=Escherichia coli, GI87081787, Length=321, Percent_Identity=23.6760124610592, Blast_Score=77, Evalue=2e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010920
- InterPro:   IPR011066
- InterPro:   IPR006685
- InterPro:   IPR011014 [H]

Pfam domain/function: PF00924 MS_channel [H]

EC number: NA

Molecular weight: Translated: 74191; Mature: 74191

Theoretical pI: Translated: 10.23; Mature: 10.23

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLMQLPSKKKLALRWLVCLFCGLLISLLFFPAFAQISFGSTATPISNPMNRPVWDLNRPW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCC
RCGRLYCSRVVFPVRILSQNNRLTLAAQALNNISPQQAAQNIELRAQSVQLTVKSVKNRL
HHHHHHHHHHHHHHHEECCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFWRETQLSGKTSTYSIQQIYDPRFWWFLHQKPIHPLTPAVQIGTQNKATVIYLPDNPK
HHHHHHHCCCCCCCEEEHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCEEEEEECCCCC
YRLFKQTVITVTAPDAQHAGIEIPQLAQEWQERIRINFSDQLWGLEFSSSFPGLRVFLSL
EEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHEEECCCCCEECEECCCCCCHHHHHHHH
SLLLTGTLGLLLLKTIRASLLSINCRLLHKQESLAESFKDDVMAAYSGNLMPLSSKDGYV
HHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHH
KEIDSLEHSMDSSVVDNVNESAKQHPNQSIDNLPRSAAYTHSLLNQTQNFLELVLLASNF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRIAFSVLVLLSATAIFPSMRIYAFIALQQSIAIPLIWLGIFIFRLLVVIIIDFNINNWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH
RRVSSRDVSSMRYTLRASTYSKVLKGGATVVTIFLGIFLTLTTIGVDRSIFTSAGVIAVG
HHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHH
VGFLSRNVLEDILNGFLILASDRFAIGDVVTIGTFSGFVENMNLFNTQLRGSDGQLTTLP
HHHHHHHHHHHHHCCEEEEECCCEEECCEEEEHHHHHHHHCCHHHHHEECCCCCCEEECC
NSQIRTVENLTKDWSRVNFEIKVSARENLRHVLDVVRLVANTMRDDKQWSGYFLDAPEIL
CHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHC
GIDQVQSSGCLIRVWIKTQPLAQWSLGREFRLQIKEAFDREGITLGAPIQNVLFSRQK
CHHHHCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHCCCCCEECCCHHHHHHCCCC
>Mature Secondary Structure
MLMQLPSKKKLALRWLVCLFCGLLISLLFFPAFAQISFGSTATPISNPMNRPVWDLNRPW
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCC
RCGRLYCSRVVFPVRILSQNNRLTLAAQALNNISPQQAAQNIELRAQSVQLTVKSVKNRL
HHHHHHHHHHHHHHHEECCCCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
VSFWRETQLSGKTSTYSIQQIYDPRFWWFLHQKPIHPLTPAVQIGTQNKATVIYLPDNPK
HHHHHHHCCCCCCCEEEHHHHCCCCEEEEEECCCCCCCCCCEEECCCCCEEEEEECCCCC
YRLFKQTVITVTAPDAQHAGIEIPQLAQEWQERIRINFSDQLWGLEFSSSFPGLRVFLSL
EEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHEEECCCCCEECEECCCCCCHHHHHHHH
SLLLTGTLGLLLLKTIRASLLSINCRLLHKQESLAESFKDDVMAAYSGNLMPLSSKDGYV
HHHHHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHH
KEIDSLEHSMDSSVVDNVNESAKQHPNQSIDNLPRSAAYTHSLLNQTQNFLELVLLASNF
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LRIAFSVLVLLSATAIFPSMRIYAFIALQQSIAIPLIWLGIFIFRLLVVIIIDFNINNWI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCHHHHH
RRVSSRDVSSMRYTLRASTYSKVLKGGATVVTIFLGIFLTLTTIGVDRSIFTSAGVIAVG
HHHHCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHCCHHHHH
VGFLSRNVLEDILNGFLILASDRFAIGDVVTIGTFSGFVENMNLFNTQLRGSDGQLTTLP
HHHHHHHHHHHHHCCEEEEECCCEEECCEEEEHHHHHHHHCCHHHHHEECCCCCCEEECC
NSQIRTVENLTKDWSRVNFEIKVSARENLRHVLDVVRLVANTMRDDKQWSGYFLDAPEIL
CHHHHHHHHHHHHHHHEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCHHC
GIDQVQSSGCLIRVWIKTQPLAQWSLGREFRLQIKEAFDREGITLGAPIQNVLFSRQK
CHHHHCCCCCEEEEEECCCCCHHHHCCHHHHHHHHHHHCCCCCEECCCHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]