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The map label for this gene is 33863124

Identifier: 33863124

GI number: 33863124

Start: 931546

End: 931944

Strand: Reverse

Name: 33863124

Synonym: PMT0852

Alternate gene names: NA

Gene position: 931944-931546 (Counterclockwise)

Preceding gene: 33863126

Following gene: 33863121

Centisome position: 38.66

GC content: 47.12

Gene sequence:

>399_bases
ATGTCTGTTGCGCCAGTTTTCTTGCTCGCAGGTATTGGAGGTTTGCTGGTTGTTCTCAATAGCCGATTGGTTCGCATTAT
TGATCGTTCTCGTGAGCTTCAAGCTTTGACCCAGAGCCGGGATACACCTGTCTCATCAGAGCGTGAGAGCAAAACAGAGT
TACAAGCATTGAAGAGGCGCATGGCGTTGGTGATGAAAGCGATTGAACTTCTCACCATCACGATTCTATTGGTTGCACTC
GTTGTAGCTTTTGTCTTTATCAGTGTGGTCACTCAACTTGATCTTGCCTTACTTGTGGTGCCTTTGTTCGTTATGGCGAT
GGTATGCCTAATGGCAGCGGCCCTTCTCTTTCAACGCGAAGTGCAGTTGGCCACTACTCAGGTTAGACGATGTTTTTAA

Upstream 100 bases:

>100_bases
CTGCTCGATACGTTTGCTCATGACTTATGTCTTGGGGCTTGTTGATCTGGTTGCCCAATTGGGTCATCAACCCGCTGAAA
ACCTGTCGAGGGCGATCCAG

Downstream 100 bases:

>100_bases
GCTTTTTCTAATTAAGTTTTAACTGAAAGTCTTTTTTTGTTGGCAGTTGATTTGTTGTTGAGATTGATTCTGGTTGAGCG
CAGGTCAAGCCTTGGGCCAA

Product: HAMP domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 131

Protein sequence:

>132_residues
MSVAPVFLLAGIGGLLVVLNSRLVRIIDRSRELQALTQSRDTPVSSERESKTELQALKRRMALVMKAIELLTITILLVAL
VVAFVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQREVQLATTQVRRCF

Sequences:

>Translated_132_residues
MSVAPVFLLAGIGGLLVVLNSRLVRIIDRSRELQALTQSRDTPVSSERESKTELQALKRRMALVMKAIELLTITILLVAL
VVAFVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQREVQLATTQVRRCF
>Mature_131_residues
SVAPVFLLAGIGGLLVVLNSRLVRIIDRSRELQALTQSRDTPVSSERESKTELQALKRRMALVMKAIELLTITILLVALV
VAFVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQREVQLATTQVRRCF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14596; Mature: 14465

Theoretical pI: Translated: 10.93; Mature: 10.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVAPVFLLAGIGGLLVVLNSRLVRIIDRSRELQALTQSRDTPVSSERESKTELQALKRR
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
MALVMKAIELLTITILLVALVVAFVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLATTQVRRCF
HHHHHHHHHHCC
>Mature Secondary Structure 
SVAPVFLLAGIGGLLVVLNSRLVRIIDRSRELQALTQSRDTPVSSERESKTELQALKRR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHH
MALVMKAIELLTITILLVALVVAFVFISVVTQLDLALLVVPLFVMAMVCLMAAALLFQRE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VQLATTQVRRCF
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA