| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862834
Identifier: 33862834
GI number: 33862834
Start: 615269
End: 615664
Strand: Reverse
Name: 33862834
Synonym: PMT0561
Alternate gene names: NA
Gene position: 615664-615269 (Counterclockwise)
Preceding gene: 33862835
Following gene: 33862830
Centisome position: 25.54
GC content: 51.77
Gene sequence:
>396_bases GTGGCCTCAGCGGCTGATGTCTGTTTAAAGCCCTGGCTTCATGCTGTTGTGCTCACAGATGTTGCTGATGTCGATGATCA GAAGCCTGGATCTACGCTCGATCTAATATCGGCTCAATCTGTTGATCTCATTGTTCGTATTGAATGCCGAAACCGAGAAG GTGACCGCCTTCCAGAGCATGACCTTGAACTTGAGATCTATCGCAGCGGCAACGATCTAAATCTGATGTTGACTTGGTGT GAATTGCCTGACCGTCCAATGCTTTGGCAAGGACAGCATCCCGTGTGGATGGATGGCAACAGTGGCCAACGCTGTCAGCC GCCTGAGGATGGAGCACCATTGGAAGCGTTCGCTCGTAGGTTGAGAGCACTGCTGGTTTTGCCTGAGCAGAGCTAG
Upstream 100 bases:
>100_bases TTGCTTAGAAATAGCCTAAGATTTTTTCACCTCCTAGATTCAGCTAAGAGCCTTGACAGGCAATGAAATCCAACAGACTG CGCAAAATTGGTCGGTCCTC
Downstream 100 bases:
>100_bases TTGATCAGAGTTCAGGGCTGGTCGGTGACAGCACCATTGCTGGCGCTACTCACCATTCGGGCGTATTTACCGAGAACTCC TGTTTGATAACGCGGCTGTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 130
Protein sequence:
>131_residues MASAADVCLKPWLHAVVLTDVADVDDQKPGSTLDLISAQSVDLIVRIECRNREGDRLPEHDLELEIYRSGNDLNLMLTWC ELPDRPMLWQGQHPVWMDGNSGQRCQPPEDGAPLEAFARRLRALLVLPEQS
Sequences:
>Translated_131_residues MASAADVCLKPWLHAVVLTDVADVDDQKPGSTLDLISAQSVDLIVRIECRNREGDRLPEHDLELEIYRSGNDLNLMLTWC ELPDRPMLWQGQHPVWMDGNSGQRCQPPEDGAPLEAFARRLRALLVLPEQS >Mature_130_residues ASAADVCLKPWLHAVVLTDVADVDDQKPGSTLDLISAQSVDLIVRIECRNREGDRLPEHDLELEIYRSGNDLNLMLTWCE LPDRPMLWQGQHPVWMDGNSGQRCQPPEDGAPLEAFARRLRALLVLPEQS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14741; Mature: 14610
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASAADVCLKPWLHAVVLTDVADVDDQKPGSTLDLISAQSVDLIVRIECRNREGDRLPEH CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCC DLELEIYRSGNDLNLMLTWCELPDRPMLWQGQHPVWMDGNSGQRCQPPEDGAPLEAFARR CCEEEEEECCCCEEEEEEEECCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHH LRALLVLPEQS HHEEEEECCCC >Mature Secondary Structure ASAADVCLKPWLHAVVLTDVADVDDQKPGSTLDLISAQSVDLIVRIECRNREGDRLPEH CCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCEEEEEEEECCCCCCCCCCC DLELEIYRSGNDLNLMLTWCELPDRPMLWQGQHPVWMDGNSGQRCQPPEDGAPLEAFARR CCEEEEEECCCCEEEEEEEECCCCCCCEECCCCCEEEECCCCCCCCCCCCCCCHHHHHHH LRALLVLPEQS HHEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA