| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862775
Identifier: 33862775
GI number: 33862775
Start: 553801
End: 554583
Strand: Reverse
Name: 33862775
Synonym: PMT0502
Alternate gene names: NA
Gene position: 554583-553801 (Counterclockwise)
Preceding gene: 33862778
Following gene: 33862774
Centisome position: 23.0
GC content: 46.87
Gene sequence:
>783_bases TTGTCATCTATTGGGGTCGCTGTTGACTCAAAAATCTCTAGTAGATGCTGGGATCTATCTGACAGCAATGGATCTTGGAA ACCTGCCACAAACATCACCTTTGATTCTGCTACCAGTAGTTATGGCGAGGAAGAGTTCCCTTCCCTCCGTAAACCATTAC ACAATGCGTCTTGTCCGATAACAGTCAGTAGTCAACTGGAATCGCTGGAATCACTTCAACTCACAGTAGGGCAGAGCATC CTGCTGTCCTCTCAGACGGATCAATCTCGCTACGTGCGGCTGTTTTTTCAGCAGGGCATTGCCAGGATCTCAGGCTCCTT CGGAGATCATTTTCCTGATATCACTTTGGCTTTTTGTGGTGATTCTGAATCTAGTTGGATTCGGTTACCCGACTGCAGCA ACTTTTTACTTGAGGCACTCACGAATAGTTCAATTGGCCTTCATTACGCAGACAACTGCCCGAAAGATCAAGATCTCCTA TGGGATTGGCTATTTGATTTTCATCTTGTCAGACATCCAGTCGGAGCCGAAGCAAGGTTAGTTGCTCTTTTAAAACTTCT GATTGGTCGCTTTGGCATCCGTAGAAGTGAAGGTTATGAATTGCCCTTTCCCCTTGGCCATGCACGCATGGCCGAACTAA TTGGGGCCACGCGCTCCACTGTTACTCGTCAGATCACCTTGTTTCGGAACAAGAATGATCTTCAGCTAATTGAACCTGGC GGGACTTTTCTGCTCTCGGCACGACTTATCGAATCCACCCCAGCTATGGATATACGATTTTGA
Upstream 100 bases:
>100_bases ACCCGAATCAATAGCTACCTCTAGATGTAATAAATGTCACATCCCAAGCAAGCATTGATCTGTGCTTGATGGGTGAGAAT GATTCATCTGCTTGTGACAA
Downstream 100 bases:
>100_bases TGACTAACCACTTGCAAATCAAGGGCCTCTGGTATCATTACGGTGATGGATCAGCAGAAGGTTGGACACTGCAATCCATC AATATGAACCTCCAGAGAGG
Product: Crp family regulatory proteins
Products: NA
Alternate protein names: Regulatory Proteins Crp Family Protein; Crp Family Regulatory Protein
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MSSIGVAVDSKISSRCWDLSDSNGSWKPATNITFDSATSSYGEEEFPSLRKPLHNASCPITVSSQLESLESLQLTVGQSI LLSSQTDQSRYVRLFFQQGIARISGSFGDHFPDITLAFCGDSESSWIRLPDCSNFLLEALTNSSIGLHYADNCPKDQDLL WDWLFDFHLVRHPVGAEARLVALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPG GTFLLSARLIESTPAMDIRF
Sequences:
>Translated_260_residues MSSIGVAVDSKISSRCWDLSDSNGSWKPATNITFDSATSSYGEEEFPSLRKPLHNASCPITVSSQLESLESLQLTVGQSI LLSSQTDQSRYVRLFFQQGIARISGSFGDHFPDITLAFCGDSESSWIRLPDCSNFLLEALTNSSIGLHYADNCPKDQDLL WDWLFDFHLVRHPVGAEARLVALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPG GTFLLSARLIESTPAMDIRF >Mature_259_residues SSIGVAVDSKISSRCWDLSDSNGSWKPATNITFDSATSSYGEEEFPSLRKPLHNASCPITVSSQLESLESLQLTVGQSIL LSSQTDQSRYVRLFFQQGIARISGSFGDHFPDITLAFCGDSESSWIRLPDCSNFLLEALTNSSIGLHYADNCPKDQDLLW DWLFDFHLVRHPVGAEARLVALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPGG TFLLSARLIESTPAMDIRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28905; Mature: 28774
Theoretical pI: Translated: 5.61; Mature: 5.61
Prosite motif: PS00042 HTH_CRP_1 ; PS51063 HTH_CRP_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSIGVAVDSKISSRCWDLSDSNGSWKPATNITFDSATSSYGEEEFPSLRKPLHNASCPI CCCCCCEECCHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCE TVSSQLESLESLQLTVGQSILLSSQTDQSRYVRLFFQQGIARISGSFGDHFPDITLAFCG EEHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DSESSWIRLPDCSNFLLEALTNSSIGLHYADNCPKDQDLLWDWLFDFHLVRHPVGAEARL CCCCCEEECCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH VALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCC GTFLLSARLIESTPAMDIRF CCEEEEEEHHHCCCCCEECC >Mature Secondary Structure SSIGVAVDSKISSRCWDLSDSNGSWKPATNITFDSATSSYGEEEFPSLRKPLHNASCPI CCCCCEECCHHHHHHCCCCCCCCCCCCCCCEEECCCCCCCCCHHHHHHHHHHCCCCCCE TVSSQLESLESLQLTVGQSILLSSQTDQSRYVRLFFQQGIARISGSFGDHFPDITLAFCG EEHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEC DSESSWIRLPDCSNFLLEALTNSSIGLHYADNCPKDQDLLWDWLFDFHLVRHPVGAEARL CCCCCEEECCCHHHHHHHHHCCCCCCEEECCCCCCCHHHHHHHHHHHHHHHCCCCCHHHH VALLKLLIGRFGIRRSEGYELPFPLGHARMAELIGATRSTVTRQITLFRNKNDLQLIEPG HHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCEEECCC GTFLLSARLIESTPAMDIRF CCEEEEEEHHHCCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA