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The map label for this gene is ndhL [H]

Identifier: 33862740

GI number: 33862740

Start: 518466

End: 518807

Strand: Reverse

Name: ndhL [H]

Synonym: PMT0467

Alternate gene names: 33862740

Gene position: 518807-518466 (Counterclockwise)

Preceding gene: 33862741

Following gene: 33862739

Centisome position: 21.52

GC content: 50.88

Gene sequence:

>342_bases
TTGCGTCTACCAATTCCGCCATGCCCCCGGCAATGGCTGGGCCAAGGCCCGCAATGGCATCCTAGATTTATACCAAGCAG
TTTGCTGACAGTGTTTCTACAGGCCGTCACCAGTCCAATCTCGATCAACTCGCTGATGGTGCTCGCTGCCTATGCCTTGT
TAGGCGGCCTCTATTTGATTGTTGTCCCTTTGCTCCTCTATTCCTGGATGAACAGACGGTGGCACTGTATGGGCAAATTC
GAGCGTCTAAGCGCCTACGGATTGGTGTTCCTGTTCTTTCCCGGTTTAATTCTATTCGCGCCTTTTTTGAATCTTCGCCT
TAATGGGCAAGGAGAGGTTTAA

Upstream 100 bases:

>100_bases
ACGCAAATGGGGAAATATTTGGCTCGTTGCGATGATCACCAGTGGGGGCAGGGGGACTTGAACCCCCACGTCCTTTTCAG
GACAAGCGATTTTAAGTCGC

Downstream 100 bases:

>100_bases
ACATATGACGCGTGCCAAGGTCATTCAGCTGGGCTTTCTTGTTTTGATACTCGGGGGGATCGCTTACAGTGTATTGAGAT
TTACGGGCCTGGATAGTATT

Product: hypothetical protein

Products: NA

Alternate protein names: NAD(P)H dehydrogenase I subunit L; NDH-1 subunit L; NDH-L [H]

Number of amino acids: Translated: 113; Mature: 113

Protein sequence:

>113_residues
MRLPIPPCPRQWLGQGPQWHPRFIPSSLLTVFLQAVTSPISINSLMVLAAYALLGGLYLIVVPLLLYSWMNRRWHCMGKF
ERLSAYGLVFLFFPGLILFAPFLNLRLNGQGEV

Sequences:

>Translated_113_residues
MRLPIPPCPRQWLGQGPQWHPRFIPSSLLTVFLQAVTSPISINSLMVLAAYALLGGLYLIVVPLLLYSWMNRRWHCMGKF
ERLSAYGLVFLFFPGLILFAPFLNLRLNGQGEV
>Mature_113_residues
MRLPIPPCPRQWLGQGPQWHPRFIPSSLLTVFLQAVTSPISINSLMVLAAYALLGGLYLIVVPLLLYSWMNRRWHCMGKF
ERLSAYGLVFLFFPGLILFAPFLNLRLNGQGEV

Specific function: NDH-1 shuttles electrons from an unknown electron donor, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory and/or the photosynthetic chain. The immediate electron acceptor for the enzyme in this species is believed to be plastoquinone

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cellular thylakoid membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the complex I ndhL subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019654 [H]

Pfam domain/function: PF10716 NdhL [H]

EC number: NA

Molecular weight: Translated: 12858; Mature: 12858

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLPIPPCPRQWLGQGPQWHPRFIPSSLLTVFLQAVTSPISINSLMVLAAYALLGGLYLI
CCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VVPLLLYSWMNRRWHCMGKFERLSAYGLVFLFFPGLILFAPFLNLRLNGQGEV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCC
>Mature Secondary Structure
MRLPIPPCPRQWLGQGPQWHPRFIPSSLLTVFLQAVTSPISINSLMVLAAYALLGGLYLI
CCCCCCCCCHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
VVPLLLYSWMNRRWHCMGKFERLSAYGLVFLFFPGLILFAPFLNLRLNGQGEV
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA