| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862707
Identifier: 33862707
GI number: 33862707
Start: 489277
End: 489876
Strand: Reverse
Name: 33862707
Synonym: PMT0434
Alternate gene names: NA
Gene position: 489876-489277 (Counterclockwise)
Preceding gene: 33862708
Following gene: 33862706
Centisome position: 20.32
GC content: 51.67
Gene sequence:
>600_bases GTGGATAAACCCCGTCGACCATTGGTGCTTGTACATGGTCTTTGGGATACCCCGCATCTTTTTAGGCGGTTGGTGAAGGC ACTCGAACAACATCAGCTACCTCTACAGATACCCCATCTGCCTCATCGCCTGGGAGCTGTTCCGCTTTCCAAGCTGGCGG AGACGTTGGATCAGCTCATCGTTGAGCAGTGGGGGGCCGAGACGGTTATAGATGTACTTGGCTTTTCGATGGGAGGGGTG ATCAGTCGAATTTGGCTGCAACAACTAGGTGGATCACGACGAACGCATCGTTTTCTGAGTGTAGGAAGTCCACAGCGAGG CACCCTCACAGCCCAGTGGATTCCCGCCTGTTTGTTTGCTGGTTTAGCGGATATGAAGCGCGGCAGCCCCTTACTGCGCA AGCTCAACGGCGACGTTTCAGCCTTAGAAGACATTGAATGCAGCAGTTATTTCTGTCGATGGGATGTCATGGTTGTTCCA GGCTGGCAAGCCGTATTACCAGTGGGTGAGCAACAGGCCGTTCCAGTAATCACGCATCAACAATTGATGTCTCATCCGCT GGCATTGAAGTTGGTAATTTCAAAGCTTCTCAGTAATTAA
Upstream 100 bases:
>100_bases GCCTGGGTTTAGTGGCAGTGTGGCTGTTGAAAGGTGTCGCAATTGGCCAACACCCTGATCTTTGCCAAGGCTTTTAGCGA TGTTTACGCATGTCGCATCA
Downstream 100 bases:
>100_bases CTTGGCGAAGTCGAGTTACCTGACCAAACTGAGCAAACACTCATAAACAAGCGTACAGATGTGTTTCTCAGCGTCAGCCA GCTTTACGGCTGCAGCGGTC
Product: lipase family protein
Products: diacylglycerol; carboxylate
Alternate protein names: PGAP1 Family Protein; Lipase Superfamily; Alpha/Beta Fold Family Lipase; Lipase-Like Protein; Lipase-Like
Number of amino acids: Translated: 199; Mature: 199
Protein sequence:
>199_residues MDKPRRPLVLVHGLWDTPHLFRRLVKALEQHQLPLQIPHLPHRLGAVPLSKLAETLDQLIVEQWGAETVIDVLGFSMGGV ISRIWLQQLGGSRRTHRFLSVGSPQRGTLTAQWIPACLFAGLADMKRGSPLLRKLNGDVSALEDIECSSYFCRWDVMVVP GWQAVLPVGEQQAVPVITHQQLMSHPLALKLVISKLLSN
Sequences:
>Translated_199_residues MDKPRRPLVLVHGLWDTPHLFRRLVKALEQHQLPLQIPHLPHRLGAVPLSKLAETLDQLIVEQWGAETVIDVLGFSMGGV ISRIWLQQLGGSRRTHRFLSVGSPQRGTLTAQWIPACLFAGLADMKRGSPLLRKLNGDVSALEDIECSSYFCRWDVMVVP GWQAVLPVGEQQAVPVITHQQLMSHPLALKLVISKLLSN >Mature_199_residues MDKPRRPLVLVHGLWDTPHLFRRLVKALEQHQLPLQIPHLPHRLGAVPLSKLAETLDQLIVEQWGAETVIDVLGFSMGGV ISRIWLQQLGGSRRTHRFLSVGSPQRGTLTAQWIPACLFAGLADMKRGSPLLRKLNGDVSALEDIECSSYFCRWDVMVVP GWQAVLPVGEQQAVPVITHQQLMSHPLALKLVISKLLSN
Specific function: Unknown
COG id: COG1075
COG function: function code R; Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.1.1.3
Molecular weight: Translated: 22203; Mature: 22203
Theoretical pI: Translated: 9.89; Mature: 9.89
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDKPRRPLVLVHGLWDTPHLFRRLVKALEQHQLPLQIPHLPHRLGAVPLSKLAETLDQLI CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH VEQWGAETVIDVLGFSMGGVISRIWLQQLGGSRRTHRFLSVGSPQRGTLTAQWIPACLFA HHHHCHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH GLADMKRGSPLLRKLNGDVSALEDIECSSYFCRWDVMVVPGWQAVLPVGEQQAVPVITHQ HHHHHCCCCHHHHHHCCCHHHHHHCCCCCEEEEEEEEEECCCCEECCCCCCCCCCHHHHH QLMSHPLALKLVISKLLSN HHHCCCHHHHHHHHHHHCC >Mature Secondary Structure MDKPRRPLVLVHGLWDTPHLFRRLVKALEQHQLPLQIPHLPHRLGAVPLSKLAETLDQLI CCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH VEQWGAETVIDVLGFSMGGVISRIWLQQLGGSRRTHRFLSVGSPQRGTLTAQWIPACLFA HHHHCHHHHHHHHHCHHHHHHHHHHHHHHCCCHHHHHHHCCCCCCCCCCHHHHHHHHHHH GLADMKRGSPLLRKLNGDVSALEDIECSSYFCRWDVMVVPGWQAVLPVGEQQAVPVITHQ HHHHHCCCCHHHHHHCCCHHHHHHCCCCCEEEEEEEEEECCCCEECCCCCCCCCCHHHHH QLMSHPLALKLVISKLLSN HHHCCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: triacylglycerol; H2O
Specific reaction: triacylglycerol + H2O = diacylglycerol + a carboxylate
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA