| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is ppnK
Identifier: 33862641
GI number: 33862641
Start: 414495
End: 415403
Strand: Direct
Name: ppnK
Synonym: PMT0368
Alternate gene names: 33862641
Gene position: 414495-415403 (Clockwise)
Preceding gene: 33862640
Following gene: 33862642
Centisome position: 17.19
GC content: 56.11
Gene sequence:
>909_bases GTGCCCTGTGTCGGACTGATCGTTAATGACGGCAAAGAGTTGGCGGTAGAGACCGCATTGACCCTTCAGTCGCGGCTTGA ACAGGCTGGTATCGAAGTGGTCAGAGCAAGTAGTTCTGGTGGAATGGTTGGCTTTGCCAATCCAGATCAGCATTTGCGCC TGCTTGGTTACAACGCGTGCGTACCTGAGGGTTTCGATGCCTCGATGGCACTGGCGATTGTTCTGGGTGGTGATGGCACC GTGCTTTCGGCGGCACGGCAGACAGCTCCTGTGCAGGTGCCAATCCTCACCATCAACACCGGACACCTTGGCTTCCTGGC GGAGGCCTATTTGGCTGATCTCGATCGGGTGATTGAGCAGGTGCTTAACAAGCAGTGGACGATTGAGGAGCGTTGCACCC TGGTGGTGAGTGTGTTGCGCGGTGATCAGTGCCGCTGGGAGGCACTCTCTTTGAATGAAATGGCCTTGCATCGTGAACCA CTCACCAGCATGTGTCATTTCGAAGTCGCGATCGGTCGCCATGCGCCAGTGGATATCTCTGCTGATGGTGTGATCCTCTC GACGCCTACGGGATCAACGGCTTATGCACTCAGTGCAGGAGGCCCGGTGATTACACCTGAGTGCCCGGTGCTTCAGCTTG CACCGATTGCCCCTCATTCGCTGGCGTCAAGAGCGCTGGTTTTCAGCGACCAGGAGCCAGTGACTGTGTTTCCAGCGACG GCGGATCGCTTGATGATGGTGGTTGATGGCAGTGCGGGTTGTTATGTGTGGCCAGAAGACCGAGTACTGATTCGTCGTAG TGATCATCCTGTGAGATTTGTGCGCTTGGCAGATCACGAGTTCTTCCAGGTGTTGCGCAACAAGTTGGGCTGGGGTTTGC CGCATGTTGCCAAACCTGATCGACCATGA
Upstream 100 bases:
>100_bases CGATAGCCGATCGTGTGCTGGATGAAGCATCGCCGTAGTGCATCATCCAAAAACAGCTGAATCCCCATAAAGTGAGCTCG TTCTTTGCTTCATTCGATCG
Downstream 100 bases:
>100_bases CCTGTAGGGCCCTCTGCTTGCAGTGGGGGGGGGAGAGATTGCGGTTTCCTTTGCTCTGGGGAGGGCTGGCGGTAGGTCTC AGCGTTCTTTCAGCTATTGG
Product: inorganic polyphosphate/ATP-NAD kinase
Products: NA
Alternate protein names: Poly(P)/ATP NAD kinase 1
Number of amino acids: Translated: 302; Mature: 301
Protein sequence:
>302_residues MPCVGLIVNDGKELAVETALTLQSRLEQAGIEVVRASSSGGMVGFANPDQHLRLLGYNACVPEGFDASMALAIVLGGDGT VLSAARQTAPVQVPILTINTGHLGFLAEAYLADLDRVIEQVLNKQWTIEERCTLVVSVLRGDQCRWEALSLNEMALHREP LTSMCHFEVAIGRHAPVDISADGVILSTPTGSTAYALSAGGPVITPECPVLQLAPIAPHSLASRALVFSDQEPVTVFPAT ADRLMMVVDGSAGCYVWPEDRVLIRRSDHPVRFVRLADHEFFQVLRNKLGWGLPHVAKPDRP
Sequences:
>Translated_302_residues MPCVGLIVNDGKELAVETALTLQSRLEQAGIEVVRASSSGGMVGFANPDQHLRLLGYNACVPEGFDASMALAIVLGGDGT VLSAARQTAPVQVPILTINTGHLGFLAEAYLADLDRVIEQVLNKQWTIEERCTLVVSVLRGDQCRWEALSLNEMALHREP LTSMCHFEVAIGRHAPVDISADGVILSTPTGSTAYALSAGGPVITPECPVLQLAPIAPHSLASRALVFSDQEPVTVFPAT ADRLMMVVDGSAGCYVWPEDRVLIRRSDHPVRFVRLADHEFFQVLRNKLGWGLPHVAKPDRP >Mature_301_residues PCVGLIVNDGKELAVETALTLQSRLEQAGIEVVRASSSGGMVGFANPDQHLRLLGYNACVPEGFDASMALAIVLGGDGTV LSAARQTAPVQVPILTINTGHLGFLAEAYLADLDRVIEQVLNKQWTIEERCTLVVSVLRGDQCRWEALSLNEMALHREPL TSMCHFEVAIGRHAPVDISADGVILSTPTGSTAYALSAGGPVITPECPVLQLAPIAPHSLASRALVFSDQEPVTVFPATA DRLMMVVDGSAGCYVWPEDRVLIRRSDHPVRFVRLADHEFFQVLRNKLGWGLPHVAKPDRP
Specific function: Catalyzes the phosphorylation of NAD to NADP. Utilizes ATP and other nucleoside triphosphates as well as inorganic polyphosphate as a source of phosphorus
COG id: COG0061
COG function: function code G; Predicted sugar kinase
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the NAD kinase family
Homologues:
Organism=Homo sapiens, GI55743112, Length=251, Percent_Identity=27.8884462151394, Blast_Score=70, Evalue=3e-12, Organism=Escherichia coli, GI1788968, Length=222, Percent_Identity=35.5855855855856, Blast_Score=144, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6320794, Length=251, Percent_Identity=29.4820717131474, Blast_Score=103, Evalue=5e-23, Organism=Saccharomyces cerevisiae, GI6325068, Length=160, Percent_Identity=33.75, Blast_Score=93, Evalue=7e-20, Organism=Saccharomyces cerevisiae, GI6322509, Length=250, Percent_Identity=28.8, Blast_Score=88, Evalue=1e-18, Organism=Drosophila melanogaster, GI28573828, Length=246, Percent_Identity=27.6422764227642, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28573830, Length=251, Percent_Identity=27.4900398406374, Blast_Score=67, Evalue=1e-11, Organism=Drosophila melanogaster, GI28573832, Length=246, Percent_Identity=27.6422764227642, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI161077047, Length=251, Percent_Identity=27.4900398406374, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI28573826, Length=246, Percent_Identity=27.6422764227642, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): PPNK1_PROMM (Q7V8H9)
Other databases:
- EMBL: BX548175 - RefSeq: NP_894201.1 - ProteinModelPortal: Q7V8H9 - SMR: Q7V8H9 - STRING: Q7V8H9 - GeneID: 1729235 - GenomeReviews: BX548175_GR - KEGG: pmt:PMT0368 - NMPDR: fig|74547.1.peg.368 - eggNOG: COG0061 - HOGENOM: HBG713904 - OMA: CVPEGFD - ProtClustDB: PRK02649 - BioCyc: PMAR74547:PMT0368-MONOMER - GO: GO:0005737 - HAMAP: MF_00361 - InterPro: IPR016064 - InterPro: IPR017438 - InterPro: IPR017437 - InterPro: IPR002504 - Gene3D: G3DSA:2.60.200.30 - Gene3D: G3DSA:3.40.50.10330 - PANTHER: PTHR20275
Pfam domain/function: PF01513 NAD_kinase; SSF111331 ATP-NAD_kinase_PpnK-typ
EC number: =2.7.1.23
Molecular weight: Translated: 32557; Mature: 32426
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPCVGLIVNDGKELAVETALTLQSRLEQAGIEVVRASSSGGMVGFANPDQHLRLLGYNAC CCEEEEEEECCCCEEHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCEEEEEECCCC VPEGFDASMALAIVLGGDGTVLSAARQTAPVQVPILTINTGHLGFLAEAYLADLDRVIEQ CCCCCCCCEEEEEEECCCCCEEHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHH VLNKQWTIEERCTLVVSVLRGDQCRWEALSLNEMALHREPLTSMCHFEVAIGRHAPVDIS HHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCHHHHHEEEEEECCCCCCEEC ADGVILSTPTGSTAYALSAGGPVITPECPVLQLAPIAPHSLASRALVFSDQEPVTVFPAT CCCEEEECCCCCEEEEEECCCCEECCCCCCEEECCCCCHHHHCEEEEECCCCCEEEEECC ADRLMMVVDGSAGCYVWPEDRVLIRRSDHPVRFVRLADHEFFQVLRNKLGWGLPHVAKPD CCEEEEEEECCCCEEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCC RP CC >Mature Secondary Structure PCVGLIVNDGKELAVETALTLQSRLEQAGIEVVRASSSGGMVGFANPDQHLRLLGYNAC CEEEEEEECCCCEEHHHHHHHHHHHHHCCEEEEEECCCCCEEEECCCCCEEEEEECCCC VPEGFDASMALAIVLGGDGTVLSAARQTAPVQVPILTINTGHLGFLAEAYLADLDRVIEQ CCCCCCCCEEEEEEECCCCCEEHHHHCCCCEEEEEEEEECCCHHHHHHHHHHHHHHHHHH VLNKQWTIEERCTLVVSVLRGDQCRWEALSLNEMALHREPLTSMCHFEVAIGRHAPVDIS HHCCCCCHHHHHHHHHHHHCCCCCEEEEECCHHHHHHHCCHHHHHEEEEEECCCCCCEEC ADGVILSTPTGSTAYALSAGGPVITPECPVLQLAPIAPHSLASRALVFSDQEPVTVFPAT CCCEEEECCCCCEEEEEECCCCEECCCCCCEEECCCCCHHHHCEEEEECCCCCEEEEECC ADRLMMVVDGSAGCYVWPEDRVLIRRSDHPVRFVRLADHEFFQVLRNKLGWGLPHVAKPD CCEEEEEEECCCCEEECCCCCEEEEECCCCEEEEEECCHHHHHHHHHHHCCCCCCCCCCC RP CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12917642