| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862634
Identifier: 33862634
GI number: 33862634
Start: 408530
End: 409507
Strand: Reverse
Name: 33862634
Synonym: PMT0361
Alternate gene names: NA
Gene position: 409507-408530 (Counterclockwise)
Preceding gene: 33862635
Following gene: 33862633
Centisome position: 16.99
GC content: 58.38
Gene sequence:
>978_bases TTGGCCAGCTTGCCAAACCTTCCCTCCAAACGCACGCTCAGCCGCTGGCTGACGGCTCTATTGCTGCCGCTCCTGGTAGC AGGCTTGATTCTGGTTCAACCCGAGCCAAGCCATGCCGCTCGTGGTGGACGCATCGGAGGGGGAAGCTTCCGTGCACCCT CAATGCCACGCAGCAGCGGTGGTATGCGCGGCGGCTATGGAGGAGGTTATGGAGGATACGGCGGGGGCTACCGCGGAGGT GGTATCGGTTTTCCCTTCCTCATTCCCATATTTGGTTTCGGTGGCGGCGGCCTTTTTGGCTTCCTAATTCTGATGTCGAT TGTGGGCGTTCTGGTCAATGCCGTACGGGGTGGTGGCAGGGGAAATGCCGCCCTTAATGGTTCAGGCGAACTCGCTCAAC GGCCCACTGCGGCTGGCCCCGTCACCATGCTGCAATTGCAAGTAGGGCTTCTGGCCAGCGCCAAGGCTCTGCAGGAAGAT CTGCGCGAGCTTGCGGCCTCAGCGCAAACAGGCAGCTCAAGCGGGCTGCAACGGGTTCTGCAGGAAACCACCCTTGCCCT TCTGCGTCAGCCAGAGCTCTGGGTTTACGCCAATGTAGAAACCGGCAGCGTGCCGTTTGCTTCCGCAGAATCCACATTTA ACCGTCTTTCGATGACCGAACGCAGCAAATTGCGAGCGGAGGTGACATCCAACGTTGCCGGCGAACGACGAACTGATGAG CTTTCAGAAAAGAGCGCCGGCGAGGCCGATGCAGCAAATGAATACATCGTCGTCACGATTTTGGTTGCATCCAGCAGCCG CATCAAGCTGAGTGAATCAATCAGCAGCGAGCAGCTACGAGAAAGCCTTCGCATCCTTGGATCCACCTCTTCAACTGATT TGATGGCCCTGGAGGTGATCTGGCAGCCCGAAGGTCGAGGTGATGTTCTGAGCGCAGAAGAGGTTGTGACGTCCTACCCC AACCTGCAGCACCTCTGA
Upstream 100 bases:
>100_bases AATCACTGGCAGGAGCAGCTGGTGCAGGAGATGGACCAACTTGAAATCGTCACTATCGTCGGCGGAGGTTCCTAGAGTTC AGACCAACCGCCGCAACGTT
Downstream 100 bases:
>100_bases TTGCATACCCCGATCAAGAAGACCCAAATGCAGGTCTTCACAAAATCTTCCACAAAGAATGACCGTCATGAACCAAACAC AAGGCCTAAGTATTGATACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 325; Mature: 324
Protein sequence:
>325_residues MASLPNLPSKRTLSRWLTALLLPLLVAGLILVQPEPSHAARGGRIGGGSFRAPSMPRSSGGMRGGYGGGYGGYGGGYRGG GIGFPFLIPIFGFGGGGLFGFLILMSIVGVLVNAVRGGGRGNAALNGSGELAQRPTAAGPVTMLQLQVGLLASAKALQED LRELAASAQTGSSSGLQRVLQETTLALLRQPELWVYANVETGSVPFASAESTFNRLSMTERSKLRAEVTSNVAGERRTDE LSEKSAGEADAANEYIVVTILVASSSRIKLSESISSEQLRESLRILGSTSSTDLMALEVIWQPEGRGDVLSAEEVVTSYP NLQHL
Sequences:
>Translated_325_residues MASLPNLPSKRTLSRWLTALLLPLLVAGLILVQPEPSHAARGGRIGGGSFRAPSMPRSSGGMRGGYGGGYGGYGGGYRGG GIGFPFLIPIFGFGGGGLFGFLILMSIVGVLVNAVRGGGRGNAALNGSGELAQRPTAAGPVTMLQLQVGLLASAKALQED LRELAASAQTGSSSGLQRVLQETTLALLRQPELWVYANVETGSVPFASAESTFNRLSMTERSKLRAEVTSNVAGERRTDE LSEKSAGEADAANEYIVVTILVASSSRIKLSESISSEQLRESLRILGSTSSTDLMALEVIWQPEGRGDVLSAEEVVTSYP NLQHL >Mature_324_residues ASLPNLPSKRTLSRWLTALLLPLLVAGLILVQPEPSHAARGGRIGGGSFRAPSMPRSSGGMRGGYGGGYGGYGGGYRGGG IGFPFLIPIFGFGGGGLFGFLILMSIVGVLVNAVRGGGRGNAALNGSGELAQRPTAAGPVTMLQLQVGLLASAKALQEDL RELAASAQTGSSSGLQRVLQETTLALLRQPELWVYANVETGSVPFASAESTFNRLSMTERSKLRAEVTSNVAGERRTDEL SEKSAGEADAANEYIVVTILVASSSRIKLSESISSEQLRESLRILGSTSSTDLMALEVIWQPEGRGDVLSAEEVVTSYPN LQHL
Specific function: Unknown
COG id: COG4371
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33962; Mature: 33831
Theoretical pI: Translated: 8.81; Mature: 8.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLPNLPSKRTLSRWLTALLLPLLVAGLILVQPEPSHAARGGRIGGGSFRAPSMPRSSG CCCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCC GMRGGYGGGYGGYGGGYRGGGIGFPFLIPIFGFGGGGLFGFLILMSIVGVLVNAVRGGGR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GNAALNGSGELAQRPTAAGPVTMLQLQVGLLASAKALQEDLRELAASAQTGSSSGLQRVL CCCEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QETTLALLRQPELWVYANVETGSVPFASAESTFNRLSMTERSKLRAEVTSNVAGERRTDE HHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LSEKSAGEADAANEYIVVTILVASSSRIKLSESISSEQLRESLRILGSTSSTDLMALEVI HHHHCCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE WQPEGRGDVLSAEEVVTSYPNLQHL ECCCCCCCCCCHHHHHHCCCCCCCC >Mature Secondary Structure ASLPNLPSKRTLSRWLTALLLPLLVAGLILVQPEPSHAARGGRIGGGSFRAPSMPRSSG CCCCCCCCHHHHHHHHHHHHHHHHHHCEEEECCCCCHHHCCCCCCCCCCCCCCCCCCCC GMRGGYGGGYGGYGGGYRGGGIGFPFLIPIFGFGGGGLFGFLILMSIVGVLVNAVRGGGR CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCC GNAALNGSGELAQRPTAAGPVTMLQLQVGLLASAKALQEDLRELAASAQTGSSSGLQRVL CCCEECCCCCHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH QETTLALLRQPELWVYANVETGSVPFASAESTFNRLSMTERSKLRAEVTSNVAGERRTDE HHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH LSEKSAGEADAANEYIVVTILVASSSRIKLSESISSEQLRESLRILGSTSSTDLMALEVI HHHHCCCCCCCCCCEEEEEEEEECCCCEEHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE WQPEGRGDVLSAEEVVTSYPNLQHL ECCCCCCCCCCHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA