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The map label for this gene is sodN [H]

Identifier: 33862613

GI number: 33862613

Start: 386318

End: 386791

Strand: Reverse

Name: sodN [H]

Synonym: PMT0340

Alternate gene names: 33862613

Gene position: 386791-386318 (Counterclockwise)

Preceding gene: 33862614

Following gene: 33862612

Centisome position: 16.04

GC content: 54.22

Gene sequence:

>474_bases
ATGTTGCGCTCGGCACTTTCTACACTTCACAGCAACCTGCCGGCCGCTTCGGTCCAGGCTCACTGTGATGGCCCTTGCGG
CGTTTACGATCCCGCCTCGGCAACAGTCTCAGCTGAAGCCGTCGTATCGATGACCAAAAAGCTGCTCGAACTGCAGCCTC
CCTCAGGCAACGATCCGGCTGCTTGGGCGGCTTACAACAACACCTTCTCCCGTTTCGTCGCCATCAAGGAAGAACAAGCT
CAGCAAACCAAGAACGAGCTACTGATCCTCTGGACGGATTATTTCAAGCCAGAGCATCTGGCAACTTTCCCGAATCTGCA
TGACATCTTCTGGAAAGCGGCCAAGCTCTGCAGCGCCTGCAAGGTCAACATCGATCAATCCAAGGCAGATGAACTGATCA
AAGCTGTGGAAGCCATTCACACGATGTTCTGGAAATCCAAGGGTCGCAATGACGCCTGGGTGAGAGCCAGTTAA

Upstream 100 bases:

>100_bases
GCATCAAATGATCTAAAGACTGAAAAGCAAATCAAATCAAAAGCAAACCCAATTAGCAATCAGCCTGGGTAGGCTCAGTT
TGGCTTTCTCTATCTGCCAG

Downstream 100 bases:

>100_bases
GCCAACAAACATGATGCCAACAGCGAACTGGCGTTCGCTGTTCCTGCTGCTTTCAGGTCTTCGTCGCCACGCTCGTGTCG
ATGGAGACTCAATGAGCCCC

Product: nickel-containing superoxide dismutase precursor (NISOD)

Products: NA

Alternate protein names: NiSOD; Nickel-containing superoxide dismutase [H]

Number of amino acids: Translated: 157; Mature: 157

Protein sequence:

>157_residues
MLRSALSTLHSNLPAASVQAHCDGPCGVYDPASATVSAEAVVSMTKKLLELQPPSGNDPAAWAAYNNTFSRFVAIKEEQA
QQTKNELLILWTDYFKPEHLATFPNLHDIFWKAAKLCSACKVNIDQSKADELIKAVEAIHTMFWKSKGRNDAWVRAS

Sequences:

>Translated_157_residues
MLRSALSTLHSNLPAASVQAHCDGPCGVYDPASATVSAEAVVSMTKKLLELQPPSGNDPAAWAAYNNTFSRFVAIKEEQA
QQTKNELLILWTDYFKPEHLATFPNLHDIFWKAAKLCSACKVNIDQSKADELIKAVEAIHTMFWKSKGRNDAWVRAS
>Mature_157_residues
MLRSALSTLHSNLPAASVQAHCDGPCGVYDPASATVSAEAVVSMTKKLLELQPPSGNDPAAWAAYNNTFSRFVAIKEEQA
QQTKNELLILWTDYFKPEHLATFPNLHDIFWKAAKLCSACKVNIDQSKADELIKAVEAIHTMFWKSKGRNDAWVRAS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nickel superoxide dismutase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014123 [H]

Pfam domain/function: PF09055 Sod_Ni [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 17348; Mature: 17348

Theoretical pI: Translated: 7.50; Mature: 7.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLRSALSTLHSNLPAASVQAHCDGPCGVYDPASATVSAEAVVSMTKKLLELQPPSGNDPA
CHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AWAAYNNTFSRFVAIKEEQAQQTKNELLILWTDYFKPEHLATFPNLHDIFWKAAKLCSAC
EEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHH
KVNIDQSKADELIKAVEAIHTMFWKSKGRNDAWVRAS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC
>Mature Secondary Structure
MLRSALSTLHSNLPAASVQAHCDGPCGVYDPASATVSAEAVVSMTKKLLELQPPSGNDPA
CHHHHHHHHHHCCCCCCEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCC
AWAAYNNTFSRFVAIKEEQAQQTKNELLILWTDYFKPEHLATFPNLHDIFWKAAKLCSAC
EEHHHHHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCHHCCCCCHHHHHHHHHHHHHHH
KVNIDQSKADELIKAVEAIHTMFWKSKGRNDAWVRAS
CCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8836134 [H]