| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862593
Identifier: 33862593
GI number: 33862593
Start: 366690
End: 367499
Strand: Reverse
Name: 33862593
Synonym: PMT0320
Alternate gene names: NA
Gene position: 367499-366690 (Counterclockwise)
Preceding gene: 33862594
Following gene: 33862592
Centisome position: 15.24
GC content: 55.06
Gene sequence:
>810_bases GTGAGCTCATCCACCCCTGATCGACGGCCTGCAAACGGCCCAGGGGTAGAAAGGCGGCGCCGGTTGCGCCAACAACGCCG CCGAGAGCAACTGATCTACCTCTGGCGAATGTTGACATTCATCTCTATTGCAGCAGGCCTGGGATGGGTACTACTCAGCC AAGGATGGAGCCTCAACAACGCCAAGCAAATCCATGTGCAAGGCAGCCGCAACATCCAAACAAACACCGTGATCAAGGCC GGTGCGCTCCACTTCCCCCAGCCACTTCTTGGTTTCAATCCCAAAGAACTAGAGCAGACCCTGCTGCGCAAACTGCCGCT CAACTCGGTCGTCGTGCAAAGGCGCCTACTCCCTCCAGGAATAGATGTGGCTCTTCAAGAACGAAAACCCGTTGCTTATG CACTACGAAAACGCGCCTATGGCCAAGAGCAGGGCATGGTCGACAGCACTGCGATGTGGATACCACTCAACGTGGCAAAA CAAGGCGAGCGTCCCTCTACAAACTTGACTGTAGAAGGCTGGACGGCCAGCAAACGGCAAGCCATTTCCCAGGTACTGGA GCAACGAAATCAGCTTGGTAGCCCCCTAGAGCGAATCCTCGTGGCTCCTGATGGAGAGCTCAGCCTGCAAACCAAGACCC TTGGCCTGATTCAGCTAGGCAGCAATAGCACCCTGCTGAAGGAGCAACTAGAAACTGTGGCCCAATTGAGCAAAACCCTG CCGTCAAGTTTTCGCCATAAAACAGGCACAACAATCGACATGAGCGATCCCTCCAAACCGGAACTGCAAATGCCCCAACC TTCTAAGTGA
Upstream 100 bases:
>100_bases GGCTGATCGGCAATGGCCAAGAAATGGATGTGCCCTTTGCCGATGCAGAACAGGCTCGCCGTTGGGTGGATCAGCTGATG GCCCGGGCACGCTGTGACCT
Downstream 100 bases:
>100_bases GGTCAATCGTCCTGCAAGGCATGCCAAGCAAAAGCAATGACAGATGACCTGAAATCGCCAAATGTCCGTTACAGAGATGG CGCAAAAAATCAACTGTGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Septal Protein; POTRA Domain FtsQ-Type Family; Polypeptide-Transport-Associated Domain Protein FtsQ-Type; Polypeptide-Transport-Associated Domain-Containing Protein
Number of amino acids: Translated: 269; Mature: 268
Protein sequence:
>269_residues MSSSTPDRRPANGPGVERRRRLRQQRRREQLIYLWRMLTFISIAAGLGWVLLSQGWSLNNAKQIHVQGSRNIQTNTVIKA GALHFPQPLLGFNPKELEQTLLRKLPLNSVVVQRRLLPPGIDVALQERKPVAYALRKRAYGQEQGMVDSTAMWIPLNVAK QGERPSTNLTVEGWTASKRQAISQVLEQRNQLGSPLERILVAPDGELSLQTKTLGLIQLGSNSTLLKEQLETVAQLSKTL PSSFRHKTGTTIDMSDPSKPELQMPQPSK
Sequences:
>Translated_269_residues MSSSTPDRRPANGPGVERRRRLRQQRRREQLIYLWRMLTFISIAAGLGWVLLSQGWSLNNAKQIHVQGSRNIQTNTVIKA GALHFPQPLLGFNPKELEQTLLRKLPLNSVVVQRRLLPPGIDVALQERKPVAYALRKRAYGQEQGMVDSTAMWIPLNVAK QGERPSTNLTVEGWTASKRQAISQVLEQRNQLGSPLERILVAPDGELSLQTKTLGLIQLGSNSTLLKEQLETVAQLSKTL PSSFRHKTGTTIDMSDPSKPELQMPQPSK >Mature_268_residues SSSTPDRRPANGPGVERRRRLRQQRRREQLIYLWRMLTFISIAAGLGWVLLSQGWSLNNAKQIHVQGSRNIQTNTVIKAG ALHFPQPLLGFNPKELEQTLLRKLPLNSVVVQRRLLPPGIDVALQERKPVAYALRKRAYGQEQGMVDSTAMWIPLNVAKQ GERPSTNLTVEGWTASKRQAISQVLEQRNQLGSPLERILVAPDGELSLQTKTLGLIQLGSNSTLLKEQLETVAQLSKTLP SSFRHKTGTTIDMSDPSKPELQMPQPSK
Specific function: Unknown
COG id: COG1589
COG function: function code M; Cell division septal protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30117; Mature: 29986
Theoretical pI: Translated: 11.43; Mature: 11.43
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSSTPDRRPANGPGVERRRRLRQQRRREQLIYLWRMLTFISIAAGLGWVLLSQGWSLNN CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AKQIHVQGSRNIQTNTVIKAGALHFPQPLLGFNPKELEQTLLRKLPLNSVVVQRRLLPPG CEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC IDVALQERKPVAYALRKRAYGQEQGMVDSTAMWIPLNVAKQGERPSTNLTVEGWTASKRQ CCEEECCCCCHHHHHHHHHCCHHCCCCCCCEEEEEEEHHCCCCCCCCCEEEECCCCHHHH AISQVLEQRNQLGSPLERILVAPDGELSLQTKTLGLIQLGSNSTLLKEQLETVAQLSKTL HHHHHHHHHHHCCCHHHHEEECCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH PSSFRHKTGTTIDMSDPSKPELQMPQPSK HHHHHHCCCCEEECCCCCCCCCCCCCCCC >Mature Secondary Structure SSSTPDRRPANGPGVERRRRLRQQRRREQLIYLWRMLTFISIAAGLGWVLLSQGWSLNN CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC AKQIHVQGSRNIQTNTVIKAGALHFPQPLLGFNPKELEQTLLRKLPLNSVVVQRRLLPPG CEEEEEECCCCCCCCCEEEECCCCCCCHHHCCCHHHHHHHHHHHCCHHHHHHHHHCCCCC IDVALQERKPVAYALRKRAYGQEQGMVDSTAMWIPLNVAKQGERPSTNLTVEGWTASKRQ CCEEECCCCCHHHHHHHHHCCHHCCCCCCCEEEEEEEHHCCCCCCCCCEEEECCCCHHHH AISQVLEQRNQLGSPLERILVAPDGELSLQTKTLGLIQLGSNSTLLKEQLETVAQLSKTL HHHHHHHHHHHCCCHHHHEEECCCCCEEEEEEEEEEEEECCCCHHHHHHHHHHHHHHHHH PSSFRHKTGTTIDMSDPSKPELQMPQPSK HHHHHHCCCCEEECCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA