| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862535
Identifier: 33862535
GI number: 33862535
Start: 302166
End: 302693
Strand: Reverse
Name: 33862535
Synonym: PMT0262
Alternate gene names: NA
Gene position: 302693-302166 (Counterclockwise)
Preceding gene: 33862536
Following gene: 33862534
Centisome position: 12.56
GC content: 41.86
Gene sequence:
>528_bases ATGAAACTTCTTCCACTGCAAGCAAATAGCGAAATAACTGGGGGCTTTACGCTGATAGAAGTTCTGCTTACGGTCGTAAT AATAGGGATCCTTAGTGCCGTTGCGATGCCAAATTACTTTAATCAAGTGCAGAGAGCCAAACAAAGTGAGGCTGTAGCGA CTCTGGCTCAGATACAAAACACCCTGGCAGCCTATATCGATGAGTTCAACCTAGCGCCTACTGGATGGAAAGACCTCAAT GAAATTGCTGCAATCATGACAACTAAAGGGCCTGCAAATCAGACAACATTCAATCAGATTATTTTGCCAGGTGGCAACTA TGCACTGAGCCGGAGTGATAATGGCGAGAATGAAAACTATTTTGAATTCACAGCAAGTTCTACTAACACTAATAGCGAAA CTGCCAAGTTTAATGTGATGGCATGCATTGATCTTGAAGGAGGAGCTAGTGACATAAAAAGAGGAGTAATCGATAGCAAA AAGAATGATGCCGTTAGCGATACAGATCTAGTATGTATACCCAAATAA
Upstream 100 bases:
>100_bases AATCATCTTCTGCATAAGACTCTCAACCACTTCTCAGATTATTCTCAGTATTTACAGAAAGAAGCCTAATAGGATAGCAA CGAAAGAGAGAAGAATTCAG
Downstream 100 bases:
>100_bases TAATGTCTAAAATTAATCGGTATAAATTTCATCATCTACGAAGCCAATTAGAACGGAACAAACCTCCAAAAGGAGAAGAA GGCTTAGCAATGTTATTGGC
Product: pilin
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 175; Mature: 175
Protein sequence:
>175_residues MKLLPLQANSEITGGFTLIEVLLTVVIIGILSAVAMPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLAPTGWKDLN EIAAIMTTKGPANQTTFNQIILPGGNYALSRSDNGENENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSK KNDAVSDTDLVCIPK
Sequences:
>Translated_175_residues MKLLPLQANSEITGGFTLIEVLLTVVIIGILSAVAMPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLAPTGWKDLN EIAAIMTTKGPANQTTFNQIILPGGNYALSRSDNGENENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSK KNDAVSDTDLVCIPK >Mature_175_residues MKLLPLQANSEITGGFTLIEVLLTVVIIGILSAVAMPNYFNQVQRAKQSEAVATLAQIQNTLAAYIDEFNLAPTGWKDLN EIAAIMTTKGPANQTTFNQIILPGGNYALSRSDNGENENYFEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSK KNDAVSDTDLVCIPK
Specific function: Unknown
COG id: COG2165
COG function: function code NU; Type II secretory pathway, pseudopilin PulG
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18839; Mature: 18839
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLLPLQANSEITGGFTLIEVLLTVVIIGILSAVAMPNYFNQVQRAKQSEAVATLAQIQN CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TLAAYIDEFNLAPTGWKDLNEIAAIMTTKGPANQTTFNQIILPGGNYALSRSDNGENENY HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCE FEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKNDAVSDTDLVCIPK EEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEECC >Mature Secondary Structure MKLLPLQANSEITGGFTLIEVLLTVVIIGILSAVAMPNYFNQVQRAKQSEAVATLAQIQN CCEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH TLAAYIDEFNLAPTGWKDLNEIAAIMTTKGPANQTTFNQIILPGGNYALSRSDNGENENY HHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCEEEECCCCCCCCCE FEFTASSTNTNSETAKFNVMACIDLEGGASDIKRGVIDSKKNDAVSDTDLVCIPK EEEEECCCCCCCCCEEEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA