| Definition | Prochlorococcus marinus str. MIT 9313 chromosome, complete genome. |
|---|---|
| Accession | NC_005071 |
| Length | 2,410,873 |
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The map label for this gene is 33862534
Identifier: 33862534
GI number: 33862534
Start: 300196
End: 302163
Strand: Reverse
Name: 33862534
Synonym: PMT0261
Alternate gene names: NA
Gene position: 302163-300196 (Counterclockwise)
Preceding gene: 33862535
Following gene: 33862533
Centisome position: 12.53
GC content: 41.21
Gene sequence:
>1968_bases ATGTCTAAAATTAATCGGTATAAATTTCATCATCTACGAAGCCAATTAGAACGGAACAAACCTCCAAAAGGAGAAGAAGG CTTAGCAATGTTATTGGCATTGTTAACAGGATTAACCTTGCTTGCCGGTACGACTGGTTTACTCATCCGTCAACTGATGG CAAGAAAAATTGGAGCCGCCCAAAGCTATCAACAGATGGCTGAAGCAGCCGCATTAAATGGGTTCAACCGTATTCTCAAC ACACTTAATAGTAACGATCCTGAGAATTACAAAGGCTATCTTTTTACGATTAACAATGGTGAATCGACATCAACGAACAA TTGGATTCGCATCAACACAACAGATGAAGCAATGCTTGAAGAGCTTTGTACAGACATCACAGCTCTTCCAAATCATCCAT CCAATCAAGAAGCTGTATGGCCAACAGGCCTTGTGGCTAAAGACAATAATGAAACAAAGGTCTCGTTGCCATTTATAGAA GATCAATCGAGAACCCAAAGGAATGATGGCAAAGGGAGCATTCAGACTTTTTACCGGCTTCGTCAATACAAACCACCTGC CAAAGACATACAAGGGGGCTACGAAGGTAGAAAGGGGGCTGCAAGGTTCCAAGTAGAAGGCTTCACCAAAAGGGTGGGAT CTGAAGATAACTATTTGGCCAGAGCACTTTTAAGTCGTTCTCTCTTTGTTCGTTCTGTTGTCAGCAAGCCGGAAGATTGG GGAGTAATGGGAGCTAATAATTATGATCTAGGCACTACAACAATTAATGGTCCAGGCCTGATTCTTTTGAATGTAAGCAA CAAGAATGAAATTCTAAAAGATGATGGTAGTTGCAGGAATGATCTTGCAACTTCAGTCTTAAATAATAGCTCCAATGCAC TAAGAGATCGAATATGGCCTGTAATGAATAGAGGGTTACCAGCAACTGAGCTTTTTGCTAATACAAAAAACTCAAAAGAA GGTAAAGAAATCTTCGATGAAGATAGCCAACGCAAAGACACTCCTCGCGTATGGAGTTTTGACGACTCAAGTAAAACCAA TGATTTTGACTGTGGTGAGGATCAGATTGTTTGCACAAGAGCAATCAATAGCACGAAAATGTCCGCCCCAAAAGGTATTG ATATTGACTCCAAAGTTATCGACAAAGAAACTAGTCCCACTCTTAAAGAATACCGTTCGAAAGTCCTATATAGCAATAGC ATTGCAATTCGTGCATGTTATCGGTGGACATGCATTGACGGCAAACCAAGAATCAGAGATGGCTGGAAATTTGGTCAAAA CCCAGGCAATATAGACTATGGAAATCAATGGACTTTTTGGATTCCAGAAGAAACAGAAAAAGATCGCAAAAAGTGGACCG TGCGAATCAAAAAGCAAGATATTTGCGCAAATACTGACGAAGCATGCCATCTCTATATAGAACACATCAATCTAGAAAAT ACAACCGTATTGATCGAGAATGATCAACGGCCCGTAGTTTTACACCTTGGGTCCCCAGACGAGACGAAGCTCAGTAACCG CATCGATTTATCAGAGAAGAGCTTGCTTTGTGGCGTGAATCGTCAAGGTACAAAATGCAATGAAGCGCCAGAGAAATTGA TATTGGTCTCAAAAAATAGTCTCAAAGCCTCAAAACAATGCAATTCAAATGATCTTAAAAATGACGAAAAATATGTTTTG AGCATAGCAGGCAAAAGCTTACCTGCAGCATTTGTCTTACTGAAAGGAGGAACATTCACCCTCAGCAATGATGCAGAGAT GCGCGGAGTCGTCTGGGCTGATAACTTCTGCTCACAATCTAAGAAATTCTCTCTAACAACAAAAAATCAAAATAGCCTTA AAGGATCTGTCATTGAAGCTGGCGATGAACTCTGGAATTTAGTTGATGGGGAGGAATACACCGGTTACGGACGGACCATC ACGCGTGGTGTTCGTGGTACAGGTTTAGATATCTTCCAGCGATGGTGA
Upstream 100 bases:
>100_bases ATCTTGAAGGAGGAGCTAGTGACATAAAAAGAGGAGTAATCGATAGCAAAAAGAATGATGCCGTTAGCGATACAGATCTA GTATGTATACCCAAATAATA
Downstream 100 bases:
>100_bases AATACATAATACCTAGAAGAAAGACGAAAGAGGTGACTTGGATTCATTCAATCAGAGAGTACTGGAATGGGCATTTAGCT CAAGCAAGTGAAAAATCCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 655; Mature: 654
Protein sequence:
>655_residues MSKINRYKFHHLRSQLERNKPPKGEEGLAMLLALLTGLTLLAGTTGLLIRQLMARKIGAAQSYQQMAEAAALNGFNRILN TLNSNDPENYKGYLFTINNGESTSTNNWIRINTTDEAMLEELCTDITALPNHPSNQEAVWPTGLVAKDNNETKVSLPFIE DQSRTQRNDGKGSIQTFYRLRQYKPPAKDIQGGYEGRKGAARFQVEGFTKRVGSEDNYLARALLSRSLFVRSVVSKPEDW GVMGANNYDLGTTTINGPGLILLNVSNKNEILKDDGSCRNDLATSVLNNSSNALRDRIWPVMNRGLPATELFANTKNSKE GKEIFDEDSQRKDTPRVWSFDDSSKTNDFDCGEDQIVCTRAINSTKMSAPKGIDIDSKVIDKETSPTLKEYRSKVLYSNS IAIRACYRWTCIDGKPRIRDGWKFGQNPGNIDYGNQWTFWIPEETEKDRKKWTVRIKKQDICANTDEACHLYIEHINLEN TTVLIENDQRPVVLHLGSPDETKLSNRIDLSEKSLLCGVNRQGTKCNEAPEKLILVSKNSLKASKQCNSNDLKNDEKYVL SIAGKSLPAAFVLLKGGTFTLSNDAEMRGVVWADNFCSQSKKFSLTTKNQNSLKGSVIEAGDELWNLVDGEEYTGYGRTI TRGVRGTGLDIFQRW
Sequences:
>Translated_655_residues MSKINRYKFHHLRSQLERNKPPKGEEGLAMLLALLTGLTLLAGTTGLLIRQLMARKIGAAQSYQQMAEAAALNGFNRILN TLNSNDPENYKGYLFTINNGESTSTNNWIRINTTDEAMLEELCTDITALPNHPSNQEAVWPTGLVAKDNNETKVSLPFIE DQSRTQRNDGKGSIQTFYRLRQYKPPAKDIQGGYEGRKGAARFQVEGFTKRVGSEDNYLARALLSRSLFVRSVVSKPEDW GVMGANNYDLGTTTINGPGLILLNVSNKNEILKDDGSCRNDLATSVLNNSSNALRDRIWPVMNRGLPATELFANTKNSKE GKEIFDEDSQRKDTPRVWSFDDSSKTNDFDCGEDQIVCTRAINSTKMSAPKGIDIDSKVIDKETSPTLKEYRSKVLYSNS IAIRACYRWTCIDGKPRIRDGWKFGQNPGNIDYGNQWTFWIPEETEKDRKKWTVRIKKQDICANTDEACHLYIEHINLEN TTVLIENDQRPVVLHLGSPDETKLSNRIDLSEKSLLCGVNRQGTKCNEAPEKLILVSKNSLKASKQCNSNDLKNDEKYVL SIAGKSLPAAFVLLKGGTFTLSNDAEMRGVVWADNFCSQSKKFSLTTKNQNSLKGSVIEAGDELWNLVDGEEYTGYGRTI TRGVRGTGLDIFQRW >Mature_654_residues SKINRYKFHHLRSQLERNKPPKGEEGLAMLLALLTGLTLLAGTTGLLIRQLMARKIGAAQSYQQMAEAAALNGFNRILNT LNSNDPENYKGYLFTINNGESTSTNNWIRINTTDEAMLEELCTDITALPNHPSNQEAVWPTGLVAKDNNETKVSLPFIED QSRTQRNDGKGSIQTFYRLRQYKPPAKDIQGGYEGRKGAARFQVEGFTKRVGSEDNYLARALLSRSLFVRSVVSKPEDWG VMGANNYDLGTTTINGPGLILLNVSNKNEILKDDGSCRNDLATSVLNNSSNALRDRIWPVMNRGLPATELFANTKNSKEG KEIFDEDSQRKDTPRVWSFDDSSKTNDFDCGEDQIVCTRAINSTKMSAPKGIDIDSKVIDKETSPTLKEYRSKVLYSNSI AIRACYRWTCIDGKPRIRDGWKFGQNPGNIDYGNQWTFWIPEETEKDRKKWTVRIKKQDICANTDEACHLYIEHINLENT TVLIENDQRPVVLHLGSPDETKLSNRIDLSEKSLLCGVNRQGTKCNEAPEKLILVSKNSLKASKQCNSNDLKNDEKYVLS IAGKSLPAAFVLLKGGTFTLSNDAEMRGVVWADNFCSQSKKFSLTTKNQNSLKGSVIEAGDELWNLVDGEEYTGYGRTIT RGVRGTGLDIFQRW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 73438; Mature: 73307
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKINRYKFHHLRSQLERNKPPKGEEGLAMLLALLTGLTLLAGTTGLLIRQLMARKIGAA CCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCH QSYQQMAEAAALNGFNRILNTLNSNDPENYKGYLFTINNGESTSTNNWIRINTTDEAMLE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHH ELCTDITALPNHPSNQEAVWPTGLVAKDNNETKVSLPFIEDQSRTQRNDGKGSIQTFYRL HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECEECCCHHHHCCCCCHHHHHHHHH RQYKPPAKDIQGGYEGRKGAARFQVEGFTKRVGSEDNYLARALLSRSLFVRSVVSKPEDW HHCCCCHHHHCCCCCCCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GVMGANNYDLGTTTINGPGLILLNVSNKNEILKDDGSCRNDLATSVLNNSSNALRDRIWP CEECCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH VMNRGLPATELFANTKNSKEGKEIFDEDSQRKDTPRVWSFDDSSKTNDFDCGEDQIVCTR HHHCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEE AINSTKMSAPKGIDIDSKVIDKETSPTLKEYRSKVLYSNSIAIRACYRWTCIDGKPRIRD CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHEECCCEEEEEEEEEEEECCCCCCCC GWKFGQNPGNIDYGNQWTFWIPEETEKDRKKWTVRIKKQDICANTDEACHLYIEHINLEN CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCC TTVLIENDQRPVVLHLGSPDETKLSNRIDLSEKSLLCGVNRQGTKCNEAPEKLILVSKNS EEEEEECCCCCEEEECCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCC LKASKQCNSNDLKNDEKYVLSIAGKSLPAAFVLLKGGTFTLSNDAEMRGVVWADNFCSQS CCHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEECCCCCEEEEEEECHHHCCC KKFSLTTKNQNSLKGSVIEAGDELWNLVDGEEYTGYGRTITRGVRGTGLDIFQRW CEEEEEECCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHCC >Mature Secondary Structure SKINRYKFHHLRSQLERNKPPKGEEGLAMLLALLTGLTLLAGTTGLLIRQLMARKIGAA CCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCH QSYQQMAEAAALNGFNRILNTLNSNDPENYKGYLFTINNGESTSTNNWIRINTTDEAMLE HHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCCCCCCEEEEECCHHHHHH ELCTDITALPNHPSNQEAVWPTGLVAKDNNETKVSLPFIEDQSRTQRNDGKGSIQTFYRL HHHHHHHCCCCCCCCCCCCCCCCEEEECCCCCEEEECEECCCHHHHCCCCCHHHHHHHHH RQYKPPAKDIQGGYEGRKGAARFQVEGFTKRVGSEDNYLARALLSRSLFVRSVVSKPEDW HHCCCCHHHHCCCCCCCCCCEEEEECHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCC GVMGANNYDLGTTTINGPGLILLNVSNKNEILKDDGSCRNDLATSVLNNSSNALRDRIWP CEECCCCCCCCCEEECCCCEEEEEECCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHH VMNRGLPATELFANTKNSKEGKEIFDEDSQRKDTPRVWSFDDSSKTNDFDCGEDQIVCTR HHHCCCCHHHHHHCCCCCCCHHHHHCCCCCCCCCCCEEECCCCCCCCCCCCCCCCEEEEE AINSTKMSAPKGIDIDSKVIDKETSPTLKEYRSKVLYSNSIAIRACYRWTCIDGKPRIRD CCCCCCCCCCCCCCCCHHHHCCCCCHHHHHHHHHHEECCCEEEEEEEEEEEECCCCCCCC GWKFGQNPGNIDYGNQWTFWIPEETEKDRKKWTVRIKKQDICANTDEACHLYIEHINLEN CCCCCCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEEECCCCCCCCCCEEEEEEEECCCC TTVLIENDQRPVVLHLGSPDETKLSNRIDLSEKSLLCGVNRQGTKCNEAPEKLILVSKNS EEEEEECCCCCEEEECCCCCCHHHCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEEECCC LKASKQCNSNDLKNDEKYVLSIAGKSLPAAFVLLKGGTFTLSNDAEMRGVVWADNFCSQS CCHHHCCCCCCCCCCCEEEEEECCCCCCEEEEEEECCEEEECCCCCEEEEEEECHHHCCC KKFSLTTKNQNSLKGSVIEAGDELWNLVDGEEYTGYGRTITRGVRGTGLDIFQRW CEEEEEECCCCCCCCHHHHCCHHHHHHCCCCCCCCCCCHHHCCCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA